LOCUS       NM_030135                601 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus cystatin domain containing 1 (Cstdc1), mRNA.
ACCESSION   NM_030135 XM_130383
VERSION     NM_030135.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 601)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 601)
  AUTHORS   Frygelius,J., Oscarson,M., Nordqvist,K., Wedell,A. and Tohonen,V.
  TITLE     The reproductive tissue specific cystatin subgroup of genes:
            expression during gonadal development in wildtype and testatin
            knockout animals
  JOURNAL   Sex Dev 1 (6), 363-372 (2007)
   PUBMED   18391548
REFERENCE   3  (bases 1 to 601)
  AUTHORS   Cornwall,G.A. and Hsia,N.
  TITLE     A new subgroup of the family 2 cystatins
  JOURNAL   Mol Cell Endocrinol 200 (1-2), 1-8 (2003)
   PUBMED   12644294
  REMARK    Review article
REFERENCE   4  (bases 1 to 601)
  AUTHORS   Li,Y., Friel,P.J., Robinson,M.O., McLean,D.J. and Griswold,M.D.
  TITLE     Identification and characterization of testis- and
            epididymis-specific genes: cystatin SC and cystatin TE-1
  JOURNAL   Biol Reprod 67 (6), 1872-1880 (2002)
   PUBMED   12444065
  REMARK    GeneRIF: unusual amino acid sequence and highly restricted
            expression suggests that cystatins SC and TE-1 play a very
            specialized role in the testis and epididymis
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL844519.9.
            
            On Aug 22, 2018 this sequence version replaced NM_030135.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF440735.1, AK020193.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164134
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-300               AL844519.9         55878-56177
            301-411             AL844519.9         57218-57328
            412-601             AL844519.9         59616-59805
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 73.55 cM"
     gene            1..601
                     /gene="Cstdc1"
                     /gene_synonym="8030411F24Rik; Cst14"
                     /note="cystatin domain containing 1"
                     /db_xref="GeneID:78609"
                     /db_xref="MGI:MGI:1925859"
     exon            1..300
                     /gene="Cstdc1"
                     /gene_synonym="8030411F24Rik; Cst14"
                     /inference="alignment:Splign:2.1.0"
     exon            301..411
                     /gene="Cstdc1"
                     /gene_synonym="8030411F24Rik; Cst14"
                     /inference="alignment:Splign:2.1.0"
     exon            412..601
                     /gene="Cstdc1"
                     /gene_synonym="8030411F24Rik; Cst14"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccttgtggaa tcctgagcct aaaagggctt tatcatctgt ggcagtacca tccctttacc
       61 cttgtgtccc cagcccctag gctgatacta aggacagtca tgtcgtggaa ggtgcccatg
      121 cttgtaggac tggttgtgct aggcactcat atatggacca ttaacaaaga atttctagat
      181 gttactaagg atctagatta ttttgtggca tcagtagagt ttgctgtggc tcagttcaat
      241 gacaacaacc cagaagagaa cacatacaag ttgctcgaag ttggcagagc ccagaaaaag
      301 acatggacaa tgattttttt aatggatttg gagatgggcc gcacaatttg taagaaacat
      361 gatgaaaaca tccataattg cccattgcta caaggctcaa gagaaaagaa ggtgcattgt
      421 gttttccaag tagatgcgag accttggttt tcccacttca ccatcctgac tagcacctgt
      481 gtgccgacat aagcgcggga aggggctttg gctatatata gtattctccc gtcctctgga
      541 gtatgactat ccgtagccca aggtctgtgt ggtgctaatg caattaaaag aatctcacag
      601 c
//
