LOCUS       NM_009979                687 bp    mRNA    linear   ROD 19-NOV-2024
DEFINITION  Mus musculus cystatin 9 (Cst9), mRNA.
ACCESSION   NM_009979
VERSION     NM_009979.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 687)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 687)
  AUTHORS   Wen,Y., Ma,X., Wang,X., Wang,F., Dong,J., Wu,Y., Lv,C., Liu,K.,
            Zhang,Y., Zhang,Z. and Yuan,S.
  TITLE     hnRNPU in Sertoli cells cooperates with WT1 and is essential for
            testicular development by modulating transcriptional factors Sox8/9
  JOURNAL   Theranostics 11 (20), 10030-10046 (2021)
   PUBMED   34815802
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 687)
  AUTHORS   Wang,J., Tian,G.G., Zheng,Z., Li,B., Xing,Q. and Wu,J.
  TITLE     Comprehensive Transcriptomic Analysis of Mouse Gonadal Development
            Involving Sexual Differentiation, Meiosis and Gametogenesis
  JOURNAL   Biol Proced Online 21, 20 (2019)
   PUBMED   31636514
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 687)
  AUTHORS   Zhao,L., Svingen,T., Ng,E.T. and Koopman,P.
  TITLE     Female-to-male sex reversal in mice caused by transgenic
            overexpression of Dmrt1
  JOURNAL   Development 142 (6), 1083-1088 (2015)
   PUBMED   25725066
REFERENCE   5  (bases 1 to 687)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
REFERENCE   6  (bases 1 to 687)
  AUTHORS   Olesen,C., Moller,M. and Byskov,A.G.
  TITLE     Tesmin transcription is regulated differently during male and
            female meiosis
  JOURNAL   Mol Reprod Dev 67 (1), 116-126 (2004)
   PUBMED   14648882
REFERENCE   7  (bases 1 to 687)
  AUTHORS   Cornwall,G.A. and Hsia,N.
  TITLE     A new subgroup of the family 2 cystatins
  JOURNAL   Mol Cell Endocrinol 200 (1-2), 1-8 (2003)
   PUBMED   12644294
  REMARK    Review article
REFERENCE   8  (bases 1 to 687)
  AUTHORS   Menke,D.B. and Page,D.C.
  TITLE     Sexually dimorphic gene expression in the developing mouse gonad
  JOURNAL   Gene Expr Patterns 2 (3-4), 359-367 (2002)
   PUBMED   12617826
REFERENCE   9  (bases 1 to 687)
  AUTHORS   Kanno,Y., Tamura,M., Chuma,S., Sakura,T., Machida,T. and
            Nakatsuji,N.
  TITLE     A cystatin-related gene, testatin/cresp, shows male-specific
            expression in germ and somatic cells from the initial stage of
            murine gonadal sex-differentiation
  JOURNAL   Int J Dev Biol 43 (8), 777-784 (1999)
   PUBMED   10707901
REFERENCE   10 (bases 1 to 687)
  AUTHORS   Tohonen,V., Osterlund,C. and Nordqvist,K.
  TITLE     Testatin: a cystatin-related gene expressed during early testis
            development
  JOURNAL   Proc Natl Acad Sci U S A 95 (24), 14208-14213 (1998)
   PUBMED   9826679
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from Y18243.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: Y18243.1, BC048486.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN00849390
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 73.58 cM"
     gene            1..687
                     /gene="Cst9"
                     /gene_synonym="cresp; M12; testatin"
                     /note="cystatin 9"
                     /db_xref="GeneID:13013"
                     /db_xref="MGI:MGI:1340053"
     exon            1..286
                     /gene="Cst9"
                     /gene_synonym="cresp; M12; testatin"
                     /inference="alignment:Splign:2.1.0"
     exon            287..400
                     /gene="Cst9"
                     /gene_synonym="cresp; M12; testatin"
                     /inference="alignment:Splign:2.1.0"
     exon            401..686
                     /gene="Cst9"
                     /gene_synonym="cresp; M12; testatin"
                     /inference="alignment:Splign:2.1.0"
     regulatory      666..671
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Cst9"
                     /gene_synonym="cresp; M12; testatin"
                     /note="hexamer: ATTAAA"
     polyA_site      686
                     /gene="Cst9"
                     /gene_synonym="cresp; M12; testatin"
                     /note="major polyA site"
ORIGIN      
        1 gatagactcc tgtgggagtg aagagctaag acagacaaag cagtagctgt ggagttctgg
       61 ctccatgtcc tgtccactga gaaagaaagc tctgcctctc accatgctgc tgcttctgct
      121 gagttttcat gttctcatca ctcctgtctc gaaggccaat aaagaaacaa acagatctgt
      181 tcatttcatt cccacagtgg aatttgccgt gaacacattc aaccaggaaa gtcaggatga
      241 atatgcctac aggatggaac atatcatgag ttcctggagg gagaaggtaa attttccaac
      301 cgtgtattcc atgaggcttc agctgcgtag aaccatatgc aagaaatttg aggagagtct
      361 cgatatttgc ccctttcagg agagccatgg tctgaataat accttcacct gcctgtttac
      421 tgtcggtacc tatccctgga taacaaaatt caagctcttc aggagtgtgt gctcatagtt
      481 tctctgatgg gagtcaccca tggactggtc acgtacttct ctgcatccgt gaaggggtta
      541 cccttggcag aacctctgtg ctcattttcc ttgttttgca gcattgtgca gtatcaagac
      601 tggatatgtg gataataatg aggggaaagt gtacattgct gttgtttcat catgtagaat
      661 agctcattaa atattgcatt tctgaaa
//
