LOCUS       NM_030004               1410 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus crystallin, lambda 1 (Cryl1), mRNA.
ACCESSION   NM_030004
VERSION     NM_030004.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1410)
  AUTHORS   Thiagarajan,R.D., Georgas,K.M., Rumballe,B.A., Lesieur,E.,
            Chiu,H.S., Taylor,D., Tang,D.T., Grimmond,S.M. and Little,M.H.
  TITLE     Identification of anchor genes during kidney development defines
            ontological relationships, molecular subcompartments and regulatory
            pathways
  JOURNAL   PLoS One 6 (2), e17286 (2011)
   PUBMED   21386911
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1410)
  AUTHORS   Mager,J., Schultz,R.M., Brunk,B.P. and Bartolomei,M.S.
  TITLE     Identification of candidate maternal-effect genes through
            comparison of multiple microarray data sets
  JOURNAL   Mamm Genome 17 (9), 941-949 (2006)
   PUBMED   16964442
REFERENCE   3  (bases 1 to 1410)
  AUTHORS   Ishikura,S., Usami,N., Araki,M. and Hara,A.
  TITLE     Structural and functional characterization of rabbit and human
            L-gulonate 3-dehydrogenase
  JOURNAL   J Biochem 137 (3), 303-314 (2005)
   PUBMED   15809331
REFERENCE   4  (bases 1 to 1410)
  AUTHORS   Kuninger,D., Kuzmickas,R., Peng,B., Pintar,J.E. and Rotwein,P.
  TITLE     Gene discovery by microarray: identification of novel genes induced
            during growth factor-mediated muscle cell survival and
            differentiation
  JOURNAL   Genomics 84 (5), 876-889 (2004)
   PUBMED   15475267
REFERENCE   5  (bases 1 to 1410)
  AUTHORS   Chen,J., Yu,L., Li,D., Gao,Q., Wang,J., Huang,X., Bi,G., Wu,H. and
            Zhao,S.
  TITLE     Human CRYL1, a novel enzyme-crystallin overexpressed in liver and
            kidney and downregulated in 58% of liver cancer tissues from 60
            Chinese patients, and four new homologs from other mammalians
  JOURNAL   Gene 302 (1-2), 103-113 (2003)
   PUBMED   12527201
REFERENCE   6  (bases 1 to 1410)
  AUTHORS   Tulsiani,D.R. and Touster,O.
  TITLE     Studies on dehydrogenases of the glucuronate-xylulose cycle in the
            livers of diabetic mice and rats
  JOURNAL   Diabetes 28 (9), 793-798 (1979)
   PUBMED   38160
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CT010506.9.
            
            On Mar 21, 2007 this sequence version replaced NM_030004.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC004074.1, AK080625.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849380, SAMN00849389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-76                CT010506.9         230172-230247       c
            77-184              CT010506.9         214522-214629       c
            185-311             CT010506.9         194686-194812       c
            312-473             CT010506.9         144732-144893       c
            474-668             CT010506.9         135357-135551       c
            669-774             CT010506.9         118129-118234       c
            775-881             CT010506.9         107681-107787       c
            882-1410            CT010506.9         106798-107326       c
FEATURES             Location/Qualifiers
     source          1..1410
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14 30.1 cM"
     gene            1..1410
                     /gene="Cryl1"
                     /gene_synonym="1110025H08Rik; A230106J09Rik; gul3dh"
                     /note="crystallin, lambda 1"
                     /db_xref="GeneID:68631"
                     /db_xref="MGI:MGI:1915881"
     exon            1..76
                     /gene="Cryl1"
                     /gene_synonym="1110025H08Rik; A230106J09Rik; gul3dh"
                     /inference="alignment:Splign:2.1.0"
     exon            77..184
                     /gene="Cryl1"
                     /gene_synonym="1110025H08Rik; A230106J09Rik; gul3dh"
                     /inference="alignment:Splign:2.1.0"
     exon            185..311
                     /gene="Cryl1"
                     /gene_synonym="1110025H08Rik; A230106J09Rik; gul3dh"
                     /inference="alignment:Splign:2.1.0"
     exon            312..473
                     /gene="Cryl1"
                     /gene_synonym="1110025H08Rik; A230106J09Rik; gul3dh"
                     /inference="alignment:Splign:2.1.0"
     exon            474..668
                     /gene="Cryl1"
                     /gene_synonym="1110025H08Rik; A230106J09Rik; gul3dh"
                     /inference="alignment:Splign:2.1.0"
     exon            669..774
                     /gene="Cryl1"
                     /gene_synonym="1110025H08Rik; A230106J09Rik; gul3dh"
                     /inference="alignment:Splign:2.1.0"
     exon            775..881
                     /gene="Cryl1"
                     /gene_synonym="1110025H08Rik; A230106J09Rik; gul3dh"
                     /inference="alignment:Splign:2.1.0"
     exon            882..1410
                     /gene="Cryl1"
                     /gene_synonym="1110025H08Rik; A230106J09Rik; gul3dh"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1392..1397
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Cryl1"
                     /gene_synonym="1110025H08Rik; A230106J09Rik; gul3dh"
                     /note="hexamer: AATAAA"
     polyA_site      1410
                     /gene="Cryl1"
                     /gene_synonym="1110025H08Rik; A230106J09Rik; gul3dh"
                     /note="major polyA site"
ORIGIN      
        1 gctaacgcag ctgtacagcc aggcccggat ctgccatggc gtccccagca gcgggcgggg
       61 tggtgatcgt aggcagtggg ctcattggtc ggagctgggc tatgctgttt gccagtggag
      121 gcttcaaggt gaaactctat gacattgagc aacagcagat aacagacgcc ctggaaaata
      181 tcaggaagga gatgaaatcc ctggagcagt ctggttctct caaaggctcc ttgagcgcag
      241 agcggcagct gtctctcatc agtggctgtg gcaacctggc cgaagcagta gagggcgctg
      301 tgcacattca ggagtgtgtt ccagagaacc tagaactgaa aaagaagatc tttgcccagc
      361 tggaccgcat tgtggatgac cgggttatcc taagcagctc cagctcttgt ctgctgcctt
      421 ccaagctgtt ctcgggcttg gctcatgtga agcagtgcat tgtggctcat cctgtcaatc
      481 caccatatta tgtccccctg gttgagctag tgccccaccc agagacagct ccagccacaa
      541 tggacagaac ctatgccttg atgaagaaga ttgggcagtc cccagtgaga gtcctgaagg
      601 agattgacgg cttcgtcctg aaccgcctgc agtacgccgt catcagtgag gcctggagac
      661 tggtggagga agaaatagta tctcctagcg acctagacct ggtcatgtca gacgggctgg
      721 gcatgcggta cgcgttcatc ggacccttgg agactatgca cctcaatgct gaaggtgtga
      781 ttagctactg tgagagatac agtgaaggga tgaagcacgt cctcagtact ttcgggcctg
      841 ttccagagtt ctcaggggcc acggtggaga gagttagtga ggacatgtgc atgaaggttc
      901 ctgatgatcc ggagcactta gctgccagga ggcagtggag ggacgactgc ctcatgaagc
      961 tctccatact gaagtaccag atgcagccca agtgaatttc ctgtaatgct gctgcccctc
     1021 cttcctgggc agctctactg gggagatgag aagctcttga tccaatccct gtgcagcatc
     1081 aagaagccca ggaagctggc ccaggcctgc tcctctgtgt ttccccatgg gcagcgatag
     1141 aggccaagta tcttgtgggc actcctgcct aaccctgcat tgggatatcg aagcactgct
     1201 taggttctga ggtgtgggtt ccctgccacc caggcaaaca ggctgaagat tctcaccttt
     1261 tctttccagt gtgattacac gtgcatttcc aggtgctgat ttgcagctct ctgttacctt
     1321 aatctacttc aaatgtattt ttttttgtaa tcattctcta atcccactct gagtgtcccg
     1381 tgaccctgca taataaagca atcactttca
//
