LOCUS       NM_031402               4006 bp    mRNA    linear   ROD 17-DEC-2022
DEFINITION  Mus musculus cysteine-rich secretory protein LCCL domain containing
            1 (Crispld1), transcript variant 1, mRNA.
ACCESSION   NM_031402
VERSION     NM_031402.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4006)
  AUTHORS   Wan Y, Rogers MB and Szabo-Rogers HL.
  TITLE     A six-gene expression toolbox for the glands, epithelium and
            chondrocytes in the mouse nasal cavity
  JOURNAL   Gene Expr Patterns 27, 46-55 (2018)
   PUBMED   29122676
REFERENCE   2  (bases 1 to 4006)
  AUTHORS   Holmfeldt P, Ganuza M, Marathe H, He B, Hall T, Kang G, Moen J,
            Pardieck J, Saulsberry AC, Cico A, Gaut L, McGoldrick D,
            Finkelstein D, Tan K and McKinney-Freeman S.
  TITLE     Functional screen identifies regulators of murine hematopoietic
            stem cell repopulation
  JOURNAL   J Exp Med 213 (3), 433-449 (2016)
   PUBMED   26880577
  REMARK    Erratum:[J Exp Med. 2016 Oct 17;213(11):2525. PMID: 27679570]
REFERENCE   3  (bases 1 to 4006)
  AUTHORS   Tang T, Li L, Tang J, Li Y, Lin WY, Martin F, Grant D, Solloway M,
            Parker L, Ye W, Forrest W, Ghilardi N, Oravecz T, Platt KA, Rice
            DS, Hansen GM, Abuin A, Eberhart DE, Godowski P, Holt KH, Peterson
            A, Zambrowicz BP and de Sauvage FJ.
  TITLE     A mouse knockout library for secreted and transmembrane proteins
  JOURNAL   Nat Biotechnol 28 (7), 749-755 (2010)
   PUBMED   20562862
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK133870.1, AK134273.1 and AK132405.1.
            
            [WARNING] On May 11, 2023 this sequence was replaced by
            NM_031402.3.
            
            On Jan 19, 2007 this sequence version replaced NM_031402.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK134273.1, AF329198.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849381
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2492              AK133870.1         2-2493
            2493-3169           AK134273.1         2429-3105
            3170-3374           AK132405.1         2909-3113
            3375-4006           AK134273.1         3310-3941
FEATURES             Location/Qualifiers
     source          1..4006
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1"
     gene            1..4006
                     /gene="Crispld1"
                     /gene_synonym="Cocoacrisp; Lcrisp1"
                     /note="cysteine-rich secretory protein LCCL domain
                     containing 1"
                     /db_xref="GeneID:83691"
                     /db_xref="MGI:MGI:1934666"
     exon            1..347
                     /gene="Crispld1"
                     /gene_synonym="Cocoacrisp; Lcrisp1"
                     /inference="alignment:Splign:2.1.0"
     exon            348..668
                     /gene="Crispld1"
                     /gene_synonym="Cocoacrisp; Lcrisp1"
                     /inference="alignment:Splign:2.1.0"
     CDS             411..1913
                     /gene="Crispld1"
                     /gene_synonym="Cocoacrisp; Lcrisp1"
                     /note="LCCL domain containing cysteine-rich secretory
                     protein 1"
                     /codon_start=1
                     /product="cysteine-rich secretory protein LCCL
                     domain-containing 1 precursor"
                     /protein_id="NP_113579.2"
                     /db_xref="CCDS:CCDS35519.1"
                     /db_xref="GeneID:83691"
                     /db_xref="MGI:MGI:1934666"
                     /translation="MMCKAQEWLRVTALLFVARAVPAMVVPNATLLEKLLEKYMDEDG
                     EWWTAKQRGKRAITDNDMQSILDLHNKLRSQVYPTASNMEYMTWDVELERSAESWAEM
                     CLWEHGPASLLPSIGQNLGAHWGRYRPPTFHVQAWYDEVRDFSYPYENECDPYCPFRC
                     SGPVCTHYTQVVWATSSRIGCAVNLCHNMNIWGQIWPKAVYLVCNYSPKGNWWGHAPY
                     KHGRPCSACPPSFGGGCRENLCYKEGSDRYYTPREEETNEIERQQSQVHDTHVRTRSD
                     DSDRNDVISTQQMSQIVSCEVRLRDQCKGTTCNRYECPAGCLDSKAKVIGSVHYEMQS
                     SICRAAIHYGIIDNEGGWVDVTRQGRKHYFIKSNRNGIQTIGKYHSANSFTVSKVTVQ
                     AVTCETTVEQLCPFHKPASHCPRVYCPRNCMQSNPHYARVIGTRIYSDLSSICRAAVH
                     AGVVRNHGGYVDVMPVDKRKMYTASFQNGIFSESLQNPTGGKAFRVFAVV"
     exon            669..787
                     /gene="Crispld1"
                     /gene_synonym="Cocoacrisp; Lcrisp1"
                     /inference="alignment:Splign:2.1.0"
     exon            788..920
                     /gene="Crispld1"
                     /gene_synonym="Cocoacrisp; Lcrisp1"
                     /inference="alignment:Splign:2.1.0"
     exon            921..1036
                     /gene="Crispld1"
                     /gene_synonym="Cocoacrisp; Lcrisp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1037..1137
                     /gene="Crispld1"
                     /gene_synonym="Cocoacrisp; Lcrisp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1138..1278
                     /gene="Crispld1"
                     /gene_synonym="Cocoacrisp; Lcrisp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1279..1339
                     /gene="Crispld1"
                     /gene_synonym="Cocoacrisp; Lcrisp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1340..1406
                     /gene="Crispld1"
                     /gene_synonym="Cocoacrisp; Lcrisp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1407..1537
                     /gene="Crispld1"
                     /gene_synonym="Cocoacrisp; Lcrisp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1538..1581
                     /gene="Crispld1"
                     /gene_synonym="Cocoacrisp; Lcrisp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1582..1654
                     /gene="Crispld1"
                     /gene_synonym="Cocoacrisp; Lcrisp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1655..1730
                     /gene="Crispld1"
                     /gene_synonym="Cocoacrisp; Lcrisp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1731..1861
                     /gene="Crispld1"
                     /gene_synonym="Cocoacrisp; Lcrisp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1862..4006
                     /gene="Crispld1"
                     /gene_synonym="Cocoacrisp; Lcrisp1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2473..2478
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Crispld1"
                     /gene_synonym="Cocoacrisp; Lcrisp1"
                     /note="putative"
     regulatory      3985..3990
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Crispld1"
                     /gene_synonym="Cocoacrisp; Lcrisp1"
                     /note="putative"
ORIGIN      
        1 agcgcctggc gccagggctc tgcaagctga agcaggaggt ccccggggag tttttccttt
       61 gtcccacctc accctagatc tctggaacac cgggagccca actctgagag ctgctttcag
      121 gggcactttg ctaactttga agcccgtgcc cactgctcct cccaggtttg ctttgagtcg
      181 cagagctagg ggctcgcgtc cccaggggtc agccagctcc tcactctgac tcccgtggtg
      241 gcctggtcct tgtcgcctct gtgaagggca gagtcaaggc aaggagcagc tgcagagaca
      301 agcagttctg ccaggctccg ctctccgggg aacatcacac tggagagcca caaggagtgg
      361 aagagcctgt cttggagatt ttccccgggg aaacccagag gccattcatt atgatgtgta
      421 aggcacagga gtggctcaga gtgaccgcac tgctatttgt ggctagagca gttccagcta
      481 tggtggttcc taatgccact ttgctggaga aacttttgga aaaatacatg gatgaggatg
      541 gtgaatggtg gacagctaag caaagaggga aaagagccat cacagacaat gatatgcaga
      601 gcatcttgga tctccataat aaactgagaa gtcaggtgta cccaacagct tctaatatgg
      661 agtatatgac atgggatgtg gagctggaaa gatctgcaga atcctgggct gaaatgtgtt
      721 tgtgggaaca tggccccgcg agcctgctgc cctccattgg acagaatttg ggggcacact
      781 ggggaagata ccgaccccca acctttcatg tacaagcatg gtatgatgaa gtgagagact
      841 ttagctaccc atatgaaaat gagtgtgacc cttactgtcc tttcagatgt tctggccctg
      901 tttgtacaca ctacactcag gtggtgtggg ctactagtag cagaataggc tgtgccgtca
      961 atctgtgcca caacatgaac atctgggggc agatatggcc caaggcagtc tacttggtgt
     1021 gcaattactc ccccaaggga aactggtggg gccacgcacc ttacaaacat ggaaggcctt
     1081 gttctgcttg cccacccagt tttggaggag gctgtagaga aaacttgtgc tacaaagaag
     1141 ggtcagacag gtattatacc cctcgagaag aagaaacaaa tgaaattgaa cggcagcagt
     1201 ctcaggtcca tgacacccat gttcgaacaa gatcagatga cagtgacaga aatgacgtca
     1261 tcagcactca gcagatgtct cagattgttt cttgtgaagt aagattgaga gaccagtgta
     1321 aagggaccac ctgcaacagg tatgagtgcc ctgcaggctg cttggacagt aaagctaaag
     1381 taattgggag tgtacattat gaaatgcaat ccagtatctg ccgagctgcc atccactatg
     1441 ggataataga caatgaaggt gggtgggtag atgtcactcg acaagggaga aagcattact
     1501 tcatcaaatc caacagaaat ggcattcaaa caattggaaa atatcattct gctaattcct
     1561 tcacagtctc caaagttaca gttcaagctg tgacctgtga aactacagtg gaacagctct
     1621 gtccattcca taagcctgct tctcattgcc ccagagtgta ctgtcctcga aactgtatgc
     1681 agtcaaatcc acattatgct cgtgtaatcg ggaccagaat ttattctgat ctgtctagta
     1741 tctgcagagc agcggtgcat gctggggtgg ttcgaaatca tggtggttat gtggatgtca
     1801 tgcctgtgga taaaagaaag atgtacactg cttcttttca gaatggaata ttctcagaaa
     1861 gtttacagaa ccctacagga ggaaaggcat tccgtgtatt cgctgttgtt tgaccgggaa
     1921 cacttggaag ggtaacagaa agcctgctcc aaatgccaca tttctgatgt ctgtatacaa
     1981 ctgtaacatt gctgtacaga agagaaaacg tattgccagc ccaccatgag actacaaatg
     2041 cgggccactc ttgatagaca aagtctataa aataaaatat tagctttggg gaaattaatg
     2101 aacattaatg gttttagaaa tcctgtgtta aatattgcta tattttctta gcagttattt
     2161 ctacagttaa ttacatagtc atgatgttct acatttctta tattatatgg tgctttgtat
     2221 atgccactga tgaagtatat ctaaagtgac tgtgaatggc ccttagagaa ttatctgtgc
     2281 attgaaaagc aatcagcctg aaaactaaat gaaactttta agtcactttt gtttttcaaa
     2341 ccagtccagt attcagttct gacctatttt aaatctctat ctgccttacc cttaggactg
     2401 ggcagttttt tctcttgtgt taagtttcat tgtgcagaat attaagtcct gatgtggcac
     2461 ttgttatttt gtattaaaat agtcttttaa tttccaagtg agaatatttg gttccttggg
     2521 aggggccaca ctggcatgtg gggaaagccc aagcagtgtg atggaatcat gtagtaacta
     2581 gagggggaga tggcagtcag agcttgctga cagagttgtt atttgaactg agttcacttt
     2641 tttcatcttt tttcatttgt atcctggcag gtacttctgc aggccaggaa gtataattaa
     2701 agagagagag agagagagag agagagagag agagagagag agagagagag agactaacga
     2761 actggtgcat tatattatta ttaccactgg ttttcataat ggtaaacagc tttatgtata
     2821 aacctttcat tagtgtgatc ctatggtagt gatgcatttg tttctgtgaa aatatatgtg
     2881 ctttgatact taaattctgt aaaatgttag ggtatttttt attcctgctg gtgaattttt
     2941 ccataagaat attaaaagta ataagtttca aaaagattat ttttactttt acatgcatgg
     3001 tttgacttgg aatcattcta aaaaaaaaaa aacagagttg attttattta tctaaattga
     3061 cttactgaca tcaatataaa taagtggttc ctagtagaaa tgcacaattt ctacctaatc
     3121 atgcagagat ttgctttttg gaaaaatagt catttattta gaaacattat aacaagagaa
     3181 atgttgaata agaggagtgc tatgaattta ataaaaaaga aatgaagtat cagacaacaa
     3241 ggtaatgatt ataattatgg aagagctgag tagaaaataa ctacttcaaa tatttttata
     3301 tgagtaggga tatagaagcc aatacaatgg agataatttg aatgcaggga tcagggaaag
     3361 gaactgggta atacaaaaga aaaatgaaaa gcagagtgtc agaagtaatt tcagaaaagt
     3421 agtttaagaa taaggcaaaa ttgcctggtc atttcttgag gattagcaga cagttaaatt
     3481 gctcaaaggg aaatcaagag ttttaaaaca tagtgttcta gaattatttt ttcccaaaat
     3541 acacattatc aattttctcc atactgggta ttttcacttt atagagaact agatttcata
     3601 ggacatttta tacaagtgtt taatcgtaac tttcctgcat gtgtgtgcgt ggttgcatgt
     3661 gtctttcatc ctctgtgttc tgggaactct tcttcctgga gaatttccat cccttttgcc
     3721 aggctaaggt tctgtagact gctctctagt tcagtttata gagactgaga catttttgag
     3781 ggggaagaga tggaagggag gggattgagg gtggttggta tatacagcgt atgtgtgaaa
     3841 ataaaagtgt agtatgatgt ggtaaaagac aatattgggc acgcaatata ccatatctta
     3901 gtttttgtta ttctcatttt tattttcatt ttccatgaaa aaactgttca cctcgcatat
     3961 tatagtgctt ctgttggtga acatattaaa aactgatcat tttcaa
//
