LOCUS       NM_007759                900 bp    mRNA    linear   ROD 24-SEP-2024
DEFINITION  Mus musculus cellular retinoic acid binding protein II (Crabp2),
            mRNA.
ACCESSION   NM_007759
VERSION     NM_007759.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 900)
  AUTHORS   Kibalnyk,Y., Afanasiev,E., Noble,R.M.N., Watson,A.E.S.,
            Poverennaya,I., Dittmann,N.L., Alexiou,M., Goodkey,K.,
            Greenwell,A.A., Ussher,J.R., Adameyko,I., Massey,J., Graf,D.,
            Bourque,S.L., Stratton,J.A. and Voronova,A.
  TITLE     The chromatin regulator Ankrd11 controls cardiac neural crest
            cell-mediated outflow tract remodeling and heart function
  JOURNAL   Nat Commun 15 (1), 4632 (2024)
   PUBMED   38951500
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 900)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   3  (bases 1 to 900)
  AUTHORS   Queen,R., Crosier,M., Eley,L., Kerwin,J., Turner,J.E., Yu,J.,
            Alqahtani,A., Dhanaseelan,T., Overman,L., Soetjoadi,H., Baldock,R.,
            Coxhead,J., Boczonadi,V., Laude,A., Cockell,S.J., Kane,M.A.,
            Lisgo,S. and Henderson,D.J.
  TITLE     Spatial transcriptomics reveals novel genes during the remodelling
            of the embryonic human arterial valves
  JOURNAL   PLoS Genet 19 (11), e1010777 (2023)
   PUBMED   38011284
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 900)
  AUTHORS   Larange,A., Takazawa,I., Kakugawa,K., Thiault,N., Ngoi,S.,
            Olive,M.E., Iwaya,H., Seguin,L., Vicente-Suarez,I., Becart,S.,
            Verstichel,G., Balancio,A., Altman,A., Chang,J.T., Taniuchi,I.,
            Lillemeier,B., Kronenberg,M., Myers,S.A. and Cheroutre,H.
  TITLE     A regulatory circuit controlled by extranuclear and nuclear
            retinoic acid receptor alpha determines T cell activation and
            function
  JOURNAL   Immunity 56 (9), 2054-2069 (2023)
   PUBMED   37597518
REFERENCE   5  (bases 1 to 900)
  AUTHORS   Derk,J., Como,C.N., Jones,H.E., Joyce,L.R., Kim,S., Spencer,B.L.,
            Bonney,S., O'Rourke,R., Pawlikowski,B., Doran,K.S. and
            Siegenthaler,J.A.
  TITLE     Formation and function of the meningeal arachnoid barrier around
            the developing mouse brain
  JOURNAL   Dev Cell 58 (8), 635-644 (2023)
   PUBMED   36996816
REFERENCE   6  (bases 1 to 900)
  AUTHORS   Ruberte,E., Friederich,V., Morriss-Kay,G. and Chambon,P.
  TITLE     Differential distribution patterns of CRABP I and CRABP II
            transcripts during mouse embryogenesis
  JOURNAL   Development 115 (4), 973-987 (1992)
   PUBMED   1333403
REFERENCE   7  (bases 1 to 900)
  AUTHORS   Harnish,D.C., Jiang,H., Soprano,K.J., Kochhar,D.M. and Soprano,D.R.
  TITLE     Retinoic acid receptor beta 2 mRNA is elevated by retinoic acid in
            vivo in susceptible regions of mid-gestation mouse embryos
  JOURNAL   Dev Dyn 194 (3), 239-246 (1992)
   PUBMED   1334737
REFERENCE   8  (bases 1 to 900)
  AUTHORS   Elder,J.T., Astrom,A., Pettersson,U., Voorhees,J.J. and Trent,J.M.
  TITLE     Assignment of the human CRABP-II gene to chromosome 1q21 by
            nonisotopic in situ hybridization
  JOURNAL   Hum Genet 89 (5), 487-490 (1992)
   PUBMED   1321791
REFERENCE   9  (bases 1 to 900)
  AUTHORS   MacGregor,T.M., Copeland,N.G., Jenkins,N.A. and Giguere,V.
  TITLE     The murine gene for cellular retinoic acid-binding protein type II.
            Genomic organization, chromosomal localization, and
            post-transcriptional regulation by retinoic acid
  JOURNAL   J Biol Chem 267 (11), 7777-7783 (1992)
   PUBMED   1313808
REFERENCE   10 (bases 1 to 900)
  AUTHORS   Mark,M.P., Bloch-Zupan,A., Wolf,C., Ruberte,E. and Ruch,J.V.
  TITLE     Involvement of cellular retinoic acid-binding proteins I and II
            (CRABPI and CRABPII) and of the cellular retinol-binding protein I
            (CRBPI) in odontogenesis in the mouse
  JOURNAL   Differentiation 48 (2), 89-98 (1991)
   PUBMED   1663469
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC158233.2.
            
            On Nov 17, 2006 this sequence version replaced NM_007759.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AI893628.1, CX565125.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-218               AC158233.2         116993-117210
            219-397             AC158233.2         120415-120593
            398-514             AC158233.2         120778-120894
            515-900             AC158233.2         121287-121672
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 38.78 cM"
     gene            1..900
                     /gene="Crabp2"
                     /gene_synonym="Crabp-2; CrabpII"
                     /note="cellular retinoic acid binding protein II"
                     /db_xref="GeneID:12904"
                     /db_xref="MGI:MGI:88491"
     exon            1..218
                     /gene="Crabp2"
                     /gene_synonym="Crabp-2; CrabpII"
                     /inference="alignment:Splign:2.1.0"
     CDS             149..565
                     /gene="Crabp2"
                     /gene_synonym="Crabp-2; CrabpII"
                     /note="CRABP-II"
                     /codon_start=1
                     /product="cellular retinoic acid-binding protein 2"
                     /protein_id="NP_031785.1"
                     /db_xref="CCDS:CCDS17460.1"
                     /db_xref="GeneID:12904"
                     /db_xref="MGI:MGI:88491"
                     /translation="MPNFSGNWKIIRSENFEEMLKALGVNMMMRKIAVAAASKPAVEI
                     KQENDTFYIKTSTTVRTTEINFKIGEEFEEQTVDGRPCKSLVKWESGNKMVCEQRLLK
                     GEGPKTSWSRELTNDGELILTMTADDVVCTRVYVRE"
     exon            219..397
                     /gene="Crabp2"
                     /gene_synonym="Crabp-2; CrabpII"
                     /inference="alignment:Splign:2.1.0"
     exon            398..514
                     /gene="Crabp2"
                     /gene_synonym="Crabp-2; CrabpII"
                     /inference="alignment:Splign:2.1.0"
     exon            515..900
                     /gene="Crabp2"
                     /gene_synonym="Crabp-2; CrabpII"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcggctgtgc aattgtcctc cacgcggctt ggtccccagg tggaaggatc tgttctgcaa
       61 aggagacagc aaagtatctt tagcctaaag gactcagcgt ccagtgttct agttgaagat
      121 ctaaagagaa agccaccttg ctgccactat gcctaacttt tctggcaact ggaagatcat
      181 ccgatcggaa aactttgagg aaatgctaaa agctctgggg gtgaacatga tgatgaggaa
      241 gatcgctgtg gctgcagcct ccaagccagc agtcgagatc aaacaggaga atgacacttt
      301 ctacatcaaa acctccacca ctgtgcgaac cacggagatt aacttcaaga tcggggagga
      361 atttgaggag cagaccgtgg atgggagacc ctgtaagagt ttggtgaaat gggagagtgg
      421 aaacaaaatg gtgtgcgagc agaggcttct gaagggggag ggccccaaga cctcctggag
      481 ccgagaactg accaatgatg gagagctgat cctgacaatg acagcagatg acgttgtgtg
      541 caccagggtc tacgtccgag agtgagtgcc tacgggtcca agaactgcct gagacgactt
      601 ccgtgcccgc tacaggacac aaacctccct cccacgtcca tcttacaaac tagctctccc
      661 cttactcctg agggttactg cttcctccaa ggccttttgt tctttgcctt ctctaagcca
      721 gagaggggca gaagctcaga accctcccac cgccatttgc ccctcccagg tcagcagtcc
      781 cagctccaca ccagggtcct tcctggaaga gactgtctct ctggcctcta ctccttatcc
      841 ttgtagtctg tgtgatttag aatatttatt ggttaatttt attaaaatgt tttaaaatgt
//
