LOCUS       NM_025379               1176 bp    mRNA    linear   ROD 06-DEC-2024
DEFINITION  Mus musculus cytochrome c oxidase subunit 7B (Cox7b), mRNA; nuclear
            gene for mitochondrial product.
ACCESSION   NM_025379
VERSION     NM_025379.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1176)
  AUTHORS   Vercellino,I. and Sazanov,L.A.
  TITLE     SCAF1 drives the compositional diversity of mammalian respirasomes
  JOURNAL   Nat Struct Mol Biol 31 (7), 1061-1071 (2024)
   PUBMED   38575788
REFERENCE   2  (bases 1 to 1176)
  AUTHORS   Vercellino,I. and Sazanov,L.A.
  TITLE     Structure and assembly of the mammalian mitochondrial supercomplex
            CIII2CIV
  JOURNAL   Nature 598 (7880), 364-367 (2021)
   PUBMED   34616041
REFERENCE   3  (bases 1 to 1176)
  AUTHORS   Basta,J.M., Singh,A.P., Robbins,L., Stout,L., Pherson,M. and
            Rauchman,M.
  TITLE     The core SWI/SNF catalytic subunit Brg1 regulates nephron
            progenitor cell proliferation and differentiation
  JOURNAL   Dev Biol 464 (2), 176-187 (2020)
   PUBMED   32504627
REFERENCE   4  (bases 1 to 1176)
  AUTHORS   Yao,Y., Liu,Q., Adrianto,I., Wu,X., Glassbrook,J., Khalasawi,N.,
            Yin,C., Yi,Q., Dong,Z., Geissmann,F., Zhou,L. and Mi,Q.S.
  TITLE     Histone deacetylase 3 controls lung alveolar macrophage development
            and homeostasis
  JOURNAL   Nat Commun 11 (1), 3822 (2020)
   PUBMED   32732898
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 1176)
  AUTHORS   Brici,D., Zhang,Q., Reinhardt,S., Dahl,A., Hartmann,H., Schmidt,K.,
            Goveas,N., Huang,J., Gahurova,L., Kelsey,G., Anastassiadis,K.,
            Stewart,A.F. and Kranz,A.
  TITLE     Setd1b, encoding a histone 3 lysine 4 methyltransferase, is a
            maternal effect gene required for the oogenic gene expression
            program
  JOURNAL   Development 144 (14), 2606-2617 (2017)
   PUBMED   28619824
REFERENCE   6  (bases 1 to 1176)
  AUTHORS   Cox,B.J., Vollmer,M., Tamplin,O., Lu,M., Biechele,S.,
            Gertsenstein,M., van Campenhout,C., Floss,T., Kuhn,R., Wurst,W.,
            Lickert,H. and Rossant,J.
  TITLE     Phenotypic annotation of the mouse X chromosome
  JOURNAL   Genome Res 20 (8), 1154-1164 (2010)
   PUBMED   20548051
REFERENCE   7  (bases 1 to 1176)
  AUTHORS   Tamplin,O.J., Kinzel,D., Cox,B.J., Bell,C.E., Rossant,J. and
            Lickert,H.
  TITLE     Microarray analysis of Foxa2 mutant mouse embryos reveals novel
            gene expression and inductive roles for the gastrula organizer and
            its derivatives
  JOURNAL   BMC Genomics 9, 511 (2008)
   PUBMED   18973680
  REMARK    Publication Status: Online-Only
REFERENCE   8  (bases 1 to 1176)
  AUTHORS   Cui,X.S., Li,X.Y., Shen,X.H., Bae,Y.J., Kang,J.J. and Kim,N.H.
  TITLE     Transcription profile in mouse four-cell, morula, and blastocyst:
            Genes implicated in compaction and blastocoel formation
  JOURNAL   Mol Reprod Dev 74 (2), 133-143 (2007)
   PUBMED   16998848
  REMARK    Review article
REFERENCE   9  (bases 1 to 1176)
  AUTHORS   Mootha,V.K., Bunkenborg,J., Olsen,J.V., Hjerrild,M.,
            Wisniewski,J.R., Stahl,E., Bolouri,M.S., Ray,H.N., Sihag,S.,
            Kamal,M., Patterson,N., Lander,E.S. and Mann,M.
  TITLE     Integrated analysis of protein composition, tissue diversity, and
            gene regulation in mouse mitochondria
  JOURNAL   Cell 115 (5), 629-640 (2003)
   PUBMED   14651853
REFERENCE   10 (bases 1 to 1176)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC089538.1.
            
            On Jul 16, 2005 this sequence version replaced NM_025379.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC089538.1, SRR1660817.338295.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: reported by MitoCarta
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
FEATURES             Location/Qualifiers
     source          1..1176
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 47.36 cM"
     gene            1..1176
                     /gene="Cox7b"
                     /gene_synonym="1110004F07Rik"
                     /note="cytochrome c oxidase subunit 7B"
                     /db_xref="GeneID:66142"
                     /db_xref="MGI:MGI:1913392"
     exon            1..171
                     /gene="Cox7b"
                     /gene_synonym="1110004F07Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             132..374
                     /gene="Cox7b"
                     /gene_synonym="1110004F07Rik"
                     /EC_number="7.1.1.9"
                     /note="cytochrome c oxidase subunit 7B, mitochondrial;
                     cytochrome c oxidase polypeptide VIIb; cytochrome c
                     oxidase subunit VIIb"
                     /codon_start=1
                     /product="cytochrome c oxidase subunit 7B, mitochondrial
                     precursor"
                     /protein_id="NP_079655.1"
                     /db_xref="CCDS:CCDS41096.1"
                     /db_xref="GeneID:66142"
                     /db_xref="MGI:MGI:1913392"
                     /translation="MLPLAKNALSRLQVRSIQQVVARQSHQKRAPSFHDKYGNAILAG
                     GAIFCVSTWTYTATQIGIEWNMSPVGRVTPKEWRDQ"
     exon            172..296
                     /gene="Cox7b"
                     /gene_synonym="1110004F07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            297..1001
                     /gene="Cox7b"
                     /gene_synonym="1110004F07Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      489..494
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Cox7b"
                     /gene_synonym="1110004F07Rik"
                     /note="hexamer: AATAAA"
     polyA_site      509
                     /gene="Cox7b"
                     /gene_synonym="1110004F07Rik"
                     /note="major polyA site"
     regulatory      979..984
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Cox7b"
                     /gene_synonym="1110004F07Rik"
                     /note="hexamer: AAGAAA"
     polyA_site      998
                     /gene="Cox7b"
                     /gene_synonym="1110004F07Rik"
ORIGIN      
        1 atctcaccaa ttctcatttg ggctccctgc tgaaagccat tttgtttttc aggacgcttt
       61 gcaagggtag ctggggtgaa tttgcaccaa ggcagcagca tagtcgccgc agttccatct
      121 tcgtctccgc gatgttgccc ttagccaaaa acgcactaag ccgtctccaa gttcgaagca
      181 ttcagcaagt ggtggcaagg cagagccacc agaagagggc acctagtttc catgacaaat
      241 atgggaatgc tatattagca ggtggagcca tcttctgtgt ttctacatgg acatatacag
      301 ccacacaaat tggaatagaa tggaacatgt cccctgttgg cagagtcacc ccaaaggaat
      361 ggagagatca gtagtcgtgc cagctggtac aataatcaag gaattgttta aaaccaactt
      421 ataagtgaat gccaagtcaa agaatcatgt actcattata ctatggcaga ttgaagaaca
      481 aataaagaaa taaagtacct taaccttcat tctaggcttt gtttttttcc tttgtaaatg
      541 aagcccaagc atggtgactt ctcatttatt taagctgtat tgtctcttaa aatggctttt
      601 taccctatga ggtggtatga gggaaatcta tgatcaggag ggcaccttta tagtaagctg
      661 aaattacaga gaatgaagaa ataagcacag agctgtttta ggagcccact gggtcattgg
      721 ccatataggt tatgcttact gccctctacc tcgtggttat atttggaatt gccattagct
      781 cccttctgct tagagactgg actgtcacca aacccaaggg gatagtgatc ctgtaatgat
      841 cctgtgtgaa ctaggtttgc taaagactac cacctcctta cactgtatgg catattcatc
      901 tgaaataggt gctaattttt cagcataatc cttaatcttt aggatctgtc atacttccta
      961 gtaatttaac tgttgctgaa gaaataaagg ctatctgtta aaaaaaaaaa aaaaaaaaaa
     1021 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1081 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1141 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//
