LOCUS       NM_053071                527 bp    mRNA    linear   ROD 06-DEC-2024
DEFINITION  Mus musculus cytochrome c oxidase subunit 6C (Cox6c), mRNA.
ACCESSION   NM_053071
VERSION     NM_053071.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 527)
  AUTHORS   Vercellino,I. and Sazanov,L.A.
  TITLE     SCAF1 drives the compositional diversity of mammalian respirasomes
  JOURNAL   Nat Struct Mol Biol 31 (7), 1061-1071 (2024)
   PUBMED   38575788
REFERENCE   2  (bases 1 to 527)
  AUTHORS   Vercellino,I. and Sazanov,L.A.
  TITLE     Structure and assembly of the mammalian mitochondrial supercomplex
            CIII2CIV
  JOURNAL   Nature 598 (7880), 364-367 (2021)
   PUBMED   34616041
REFERENCE   3  (bases 1 to 527)
  AUTHORS   Yao,Y., Liu,Q., Adrianto,I., Wu,X., Glassbrook,J., Khalasawi,N.,
            Yin,C., Yi,Q., Dong,Z., Geissmann,F., Zhou,L. and Mi,Q.S.
  TITLE     Histone deacetylase 3 controls lung alveolar macrophage development
            and homeostasis
  JOURNAL   Nat Commun 11 (1), 3822 (2020)
   PUBMED   32732898
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 527)
  AUTHORS   Kim,S.C., Sprung,R., Chen,Y., Xu,Y., Ball,H., Pei,J., Cheng,T.,
            Kho,Y., Xiao,H., Xiao,L., Grishin,N.V., White,M., Yang,X.J. and
            Zhao,Y.
  TITLE     Substrate and functional diversity of lysine acetylation revealed
            by a proteomics survey
  JOURNAL   Mol Cell 23 (4), 607-618 (2006)
   PUBMED   16916647
REFERENCE   5  (bases 1 to 527)
  AUTHORS   Stylianou,I.M., Christians,J.K., Keightley,P.D., Bunger,L.,
            Clinton,M., Bulfield,G. and Horvat,S.
  TITLE     Genetic complexity of an obesity QTL (Fob3) revealed by detailed
            genetic mapping
  JOURNAL   Mamm Genome 15 (6), 472-481 (2004)
   PUBMED   15181539
REFERENCE   6  (bases 1 to 527)
  AUTHORS   Mootha,V.K., Bunkenborg,J., Olsen,J.V., Hjerrild,M.,
            Wisniewski,J.R., Stahl,E., Bolouri,M.S., Ray,H.N., Sihag,S.,
            Kamal,M., Patterson,N., Lander,E.S. and Mann,M.
  TITLE     Integrated analysis of protein composition, tissue diversity, and
            gene regulation in mouse mitochondria
  JOURNAL   Cell 115 (5), 629-640 (2003)
   PUBMED   14651853
REFERENCE   7  (bases 1 to 527)
  AUTHORS   Da Cruz,S., Xenarios,I., Langridge,J., Vilbois,F., Parone,P.A. and
            Martinou,J.C.
  TITLE     Proteomic analysis of the mouse liver mitochondrial inner membrane
  JOURNAL   J Biol Chem 278 (42), 41566-41571 (2003)
   PUBMED   12865426
REFERENCE   8  (bases 1 to 527)
  AUTHORS   Frankfort,B.J. and Gelman,I.H.
  TITLE     Identification of novel cellular genes transcriptionally suppressed
            by v-src
  JOURNAL   Biochem Biophys Res Commun 206 (3), 916-926 (1995)
   PUBMED   7832805
REFERENCE   9  (bases 1 to 527)
  AUTHORS   Schneyder,B., Mell,O., Anthony,G. and Kadenbach,B.
  TITLE     Cross reactivity of monoclonal antibodies and cDNA hybridization
            suggest evolutionary relationships between cytochrome c oxidase
            subunits VIa and VIc and between VIIa and VIIb
  JOURNAL   Eur J Biochem 198 (1), 85-92 (1991)
   PUBMED   1645653
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY100624.1, AK013459.1 and BC094413.1.
            
            On Dec 22, 2005 this sequence version replaced NM_053071.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CN832289.1, CJ236749.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164142
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: reported by MitoCarta
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-85                BY100624.1         3-87
            86-492              AK013459.1         2-408
            493-527             BC094413.1         396-430
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="15"
                     /map="15 14.46 cM"
     gene            1..527
                     /gene="Cox6c"
                     /note="cytochrome c oxidase subunit 6C"
                     /db_xref="GeneID:12864"
                     /db_xref="MGI:MGI:104614"
     exon            1..122
                     /gene="Cox6c"
                     /inference="alignment:Splign:2.1.0"
     exon            123..252
                     /gene="Cox6c"
                     /inference="alignment:Splign:2.1.0"
     exon            253..381
                     /gene="Cox6c"
                     /inference="alignment:Splign:2.1.0"
     exon            382..503
                     /gene="Cox6c"
                     /inference="alignment:Splign:2.1.0"
     regulatory      477..482
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Cox6c"
                     /note="hexamer: AATAAA"
     polyA_site      503
                     /gene="Cox6c"
                     /note="major polyA site"
ORIGIN      
        1 gcgcttgaat acttttggac tccttaggcc accgtcgccg ggtcctccat cgactcttgc
       61 gcatgcgtgc tgctggaagg ctctccgttt ctccgagaac cgggaaggac gttggtgtag
      121 aggacattgg ctaccatgag ttccggtgcg ctgttgccca aaccacagat gcgtggtctt
      181 ctggccaagc gtctgcgggt tcatattgct ggcgcattca ttgtggccct gggagttgcc
      241 gctgcctata agtttggcgt ggctgagcca agaaagaagg cgtatgcaga attctacaga
      301 aattatgatt ccatgaaaga tttcgaagag atgaggaagg ctggtatctt tcagagtgcc
      361 aagtgatttc agaatgcaaa gaattctttg gattgcgctc caaagaagtt cattgctgac
      421 ctgcgctcct gaactatgaa acatgaatat gtgtgggcta aggaatagtt tctttcaata
      481 aacagtaatt atatggacag taaaaaaaaa aaaaaaaaaa aaaaaaa
//
