LOCUS       NM_197980                778 bp    mRNA    linear   ROD 10-FEB-2025
DEFINITION  Mus musculus cytochrome c oxidase assembly protein 19 (Cox19),
            mRNA.
ACCESSION   NM_197980 XM_357519
VERSION     NM_197980.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 778)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 778)
  AUTHORS   Dickinson,M.E., Flenniken,A.M., Ji,X., Teboul,L., Wong,M.D.,
            White,J.K., Meehan,T.F., Weninger,W.J., Westerberg,H., Adissu,H.,
            Baker,C.N., Bower,L., Brown,J.M., Caddle,L.B., Chiani,F., Clary,D.,
            Cleak,J., Daly,M.J., Denegre,J.M., Doe,B., Dolan,M.E., Edie,S.M.,
            Fuchs,H., Gailus-Durner,V., Galli,A., Gambadoro,A., Gallegos,J.,
            Guo,S., Horner,N.R., Hsu,C.W., Johnson,S.J., Kalaga,S., Keith,L.C.,
            Lanoue,L., Lawson,T.N., Lek,M., Mark,M., Marschall,S., Mason,J.,
            McElwee,M.L., Newbigging,S., Nutter,L.M., Peterson,K.A.,
            Ramirez-Solis,R., Rowland,D.J., Ryder,E., Samocha,K.E.,
            Seavitt,J.R., Selloum,M., Szoke-Kovacs,Z., Tamura,M., Trainor,A.G.,
            Tudose,I., Wakana,S., Warren,J., Wendling,O., West,D.B., Wong,L.,
            Yoshiki,A., MacArthur,D.G., Tocchini-Valentini,G.P., Gao,X.,
            Flicek,P., Bradley,A., Skarnes,W.C., Justice,M.J., Parkinson,H.E.,
            Moore,M., Wells,S., Braun,R.E., Svenson,K.L., de Angelis,M.H.,
            Herault,Y., Mohun,T., Mallon,A.M., Henkelman,R.M., Brown,S.D.,
            Adams,D.J., Lloyd,K.C., McKerlie,C., Beaudet,A.L., Bucan,M. and
            Murray,S.A.
  CONSRTM   International Mouse Phenotyping Consortium; Jackson Laboratory;
            Infrastructure Nationale PHENOMIN, Institut Clinique de la Souris
            (ICS); Charles River Laboratories; MRC Harwell; Toronto Centre for
            Phenogenomics; Wellcome Trust Sanger Institute; RIKEN BioResource
            Center
  TITLE     High-throughput discovery of novel developmental phenotypes
  JOURNAL   Nature 537 (7621), 508-514 (2016)
   PUBMED   27626380
  REMARK    Erratum:[Nature. 2017 Nov 16;551(7680):398. doi:
            10.1038/nature24643.. PMID: 29144450]
REFERENCE   3  (bases 1 to 778)
  AUTHORS   Dequeant,M.L., Glynn,E., Gaudenz,K., Wahl,M., Chen,J., Mushegian,A.
            and Pourquie,O.
  TITLE     A complex oscillating network of signaling genes underlies the
            mouse segmentation clock
  JOURNAL   Science 314 (5805), 1595-1598 (2006)
   PUBMED   17095659
REFERENCE   4  (bases 1 to 778)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC031792.1.
            
            On Dec 17, 2003 this sequence version replaced XM_357519.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC031792.1, DV042893.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849376
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..778
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="FVB/N"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 78.4 cM"
     gene            1..778
                     /gene="Cox19"
                     /gene_synonym="1810074D02Rik; 2810437L13Rik"
                     /note="cytochrome c oxidase assembly protein 19"
                     /db_xref="GeneID:68033"
                     /db_xref="MGI:MGI:1915283"
     exon            1..95
                     /gene="Cox19"
                     /gene_synonym="1810074D02Rik; 2810437L13Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             14..292
                     /gene="Cox19"
                     /gene_synonym="1810074D02Rik; 2810437L13Rik"
                     /note="COX19 cytochrome c oxidase assembly homolog"
                     /codon_start=1
                     /product="cytochrome c oxidase assembly protein COX19"
                     /protein_id="NP_932097.1"
                     /db_xref="CCDS:CCDS39350.1"
                     /db_xref="GeneID:68033"
                     /db_xref="MGI:MGI:1915283"
                     /translation="MSTAMNFGTKSFQPRPPDKGSFPLDHFGECKSFKEKFMRCLRDK
                     NYENALCRNESKEYLMCRMQRQLMAPEPLEKLGFRDLMEGKPEAKDEC"
     exon            96..207
                     /gene="Cox19"
                     /gene_synonym="1810074D02Rik; 2810437L13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            208..761
                     /gene="Cox19"
                     /gene_synonym="1810074D02Rik; 2810437L13Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      743..748
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Cox19"
                     /gene_synonym="1810074D02Rik; 2810437L13Rik"
                     /note="hexamer: AATACA"
     polyA_site      761
                     /gene="Cox19"
                     /gene_synonym="1810074D02Rik; 2810437L13Rik"
                     /note="major polyA site"
ORIGIN      
        1 ggatttcgcc gtgatgtcga ccgcaatgaa cttcgggacc aaaagcttcc agccgcggcc
       61 cccagacaaa ggcagcttcc cgctggacca cttcggtgaa tgtaaaagct ttaaagaaaa
      121 attcatgagg tgtctccgtg acaagaacta tgaaaatgct ttgtgcagaa atgaatctaa
      181 agagtattta atgtgcagga tgcaaaggca gctgatggca ccggagccgc tagagaagct
      241 cggctttaga gacctaatgg aagggaagcc agaggcaaag gatgaatgtt gagaagggag
      301 ccacaggacc ttgtccccag cctggagcag agctgagccc ttctgcccac agtgcagggg
      361 gacctgacac tcagcccgtg ctgccccgtg caggggctct ccctggggac tttagaacat
      421 ggctcacccc tgcagcacac accgaaatgt ttcctctgtt gacctcggtt cccctctaga
      481 gagtgtgttt ttcttccgtc tgtgtgtcac aggacccgtc aggactgaac cctgctgtga
      541 tttgatatcc cgcccagagt ggctgtcaca ccacagagcc ctggccagca ttccacagcg
      601 actcagcctg tcacagatct gagtcctcac actggaacct gtcaatgaaa ccaagcgaca
      661 ggaaaatgtc cgccttttgt gctcacagac tcatatcagc tggcttccct ttctctgtgt
      721 tctctcctgt gaacaaagct ggaatacaaa gtaggaagtg aaaaaaaaaa aaaaaaaa
//
