LOCUS       NM_001039710            1748 bp    mRNA    linear   ROD 30-JUL-2024
DEFINITION  Mus musculus coenzyme Q10B (Coq10b), transcript variant 1, mRNA;
            nuclear gene for mitochondrial product.
ACCESSION   NM_001039710
VERSION     NM_001039710.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1748)
  AUTHORS   Xu,M., Yao,J., Shi,Y., Yi,H., Zhao,W., Lin,X. and Yang,Z.
  TITLE     The SRCAP chromatin remodeling complex promotes oxidative
            metabolism during prenatal heart development
  JOURNAL   Development 148 (8) (2021)
   PUBMED   33913477
REFERENCE   2  (bases 1 to 1748)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK015454.1, AK168837.1 and AI462376.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK002294.1, AK168837.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: reported by MitoCarta
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-103               AK015454.1         2-104
            104-1718            AK168837.1         2-1616
            1719-1748           AI462376.1         1-30                c
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 28.0 cM"
     gene            1..1748
                     /gene="Coq10b"
                     /gene_synonym="1500041J02Rik; 1700030I21Rik;
                     9530077A17Rik"
                     /note="coenzyme Q10B"
                     /db_xref="GeneID:67876"
                     /db_xref="MGI:MGI:1915126"
     exon            1..221
                     /gene="Coq10b"
                     /gene_synonym="1500041J02Rik; 1700030I21Rik;
                     9530077A17Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             106..834
                     /gene="Coq10b"
                     /gene_synonym="1500041J02Rik; 1700030I21Rik;
                     9530077A17Rik"
                     /note="isoform 1 is encoded by transcript variant 1;
                     coenzyme Q-binding protein COQ10 homolog B, mitochondrial;
                     coenzyme Q10 homolog B"
                     /codon_start=1
                     /product="coenzyme Q-binding protein COQ10 homolog B,
                     mitochondrial isoform 1"
                     /protein_id="NP_001034799.1"
                     /db_xref="CCDS:CCDS35568.1"
                     /db_xref="GeneID:67876"
                     /db_xref="MGI:MGI:1915126"
                     /translation="MIMAARTSQRALARVASGCHPKSTTVTEAPARGSARDVRHLAAC
                     GVLINRTLPPCAAVLPKEICARTFFRISAPLVNKRKEYSERRILGYSMQEMYDVVSGM
                     EDYQHFVPWCKKSDIISRRSGYCKTRLEVGFPPVLERYTSIVTLVKPHLVKASCTDGK
                     LFNHLETIWRFSPGLPGYPRTCTLDFSISFEFRSLLHSQLATLFFDEVVKQMVAAFER
                     RACKLYGPETNIPRELMLHEIHHT"
     exon            222..371
                     /gene="Coq10b"
                     /gene_synonym="1500041J02Rik; 1700030I21Rik;
                     9530077A17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            372..564
                     /gene="Coq10b"
                     /gene_synonym="1500041J02Rik; 1700030I21Rik;
                     9530077A17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            565..666
                     /gene="Coq10b"
                     /gene_synonym="1500041J02Rik; 1700030I21Rik;
                     9530077A17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            667..1733
                     /gene="Coq10b"
                     /gene_synonym="1500041J02Rik; 1700030I21Rik;
                     9530077A17Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1289..1294
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Coq10b"
                     /gene_synonym="1500041J02Rik; 1700030I21Rik;
                     9530077A17Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      1317
                     /gene="Coq10b"
                     /gene_synonym="1500041J02Rik; 1700030I21Rik;
                     9530077A17Rik"
                     /note="major polyA site"
     regulatory      1701..1706
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Coq10b"
                     /gene_synonym="1500041J02Rik; 1700030I21Rik;
                     9530077A17Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1733
                     /gene="Coq10b"
                     /gene_synonym="1500041J02Rik; 1700030I21Rik;
                     9530077A17Rik"
                     /note="major polyA site"
ORIGIN      
        1 agagggctcc cggattggct gagaggcgca ggagccgtcc ctccaggccg gcctgagggc
       61 ggcgcctcgt tccgggtgcc cgcgttggct accggcttca caaagatgat catggcagct
      121 cggaccagtc agagggccct ggcgagggtg gcatcggggt gccatccgaa gtcgaccacc
      181 gtgacggaag ccccggcgcg ggggtctgcg cgcgacgtca gacacttagc tgcctgtggt
      241 gtactgataa acagaaccct tccaccgtgt gctgcagttt tgcctaaaga gatctgtgcg
      301 agaactttct tcagaatctc tgcgccacta gtaaataaac gaaaggagta ttcagagaga
      361 agaattctag ggtactcaat gcaagaaatg tatgacgtag tatcaggaat ggaggactat
      421 cagcatttcg ttccctggtg taaaaagtca gatataatat caaggcgatc tggatactgt
      481 aaaaccagat tagaagttgg gttccccccc gttctggaga gatacacatc aatagtaacc
      541 ttggtaaaac cgcacttggt aaaggcatct tgtactgatg ggaaactttt caatcatttg
      601 gagactattt ggcgttttag cccaggtctt cctggctatc caagaacttg taccttggat
      661 ttttcaattt cttttgaatt ccgctccctt ctgcactctc agctcgctac tctgttcttc
      721 gatgaagttg tgaaacaaat ggtagcagcc tttgaaagaa gagcctgtaa actgtatggt
      781 ccagagacaa acatacctcg ggaattaatg cttcatgaaa ttcaccacac ctaagaggaa
      841 aatattagct gcctccacct actcttggct agtttgttca cttctaggaa gtccttttac
      901 catctgttga gaagtcagaa agcatttgtt aaacctgcct tgattctaag cccgtgctgt
      961 tgaaaatttg cacattgaac atggacccac ttgtacatag aattatttct tcaatcaagt
     1021 gtgactctaa gtatcatgta catttgcagg ctccgaccac ctttgtaata acggatgtca
     1081 tcactgttgc taggatacca cattcctcgt ttgagtgtac agatgaacaa gtcttttaat
     1141 tctcacctta catgaaaagg ttagctgaga tacaatgtgt gttatattaa ccatatcatg
     1201 tttaagttat taggttcaga gtatttgtaa cttattgtta ttcggcatgc catatggctt
     1261 agggtatttg aataatcata tatttaccat taaaactgtg atttaaagta ttgctaatga
     1321 agtcttagca ctttgggtat tttaattgtt cttatgggta gcagtagatg attcagtgtt
     1381 gttgggaagt tgtttcccag atgtactgag tggggttttt gttctggtct tttgtttttt
     1441 gttttttgtt ttatttggtg agtggtccag agctctgagc tacttttcta gacatttgaa
     1501 acttccttcc aggtgctttg tgctgattgt gtgtcaaaat tttatctgcc actgtaggca
     1561 acagataagt aagtagttaa tttgtctcca gcaccacaca aggcattttc tatttattgt
     1621 gcatattcac tttcaataat attctgaact gatttttttt taaaaaccac aaatcagtag
     1681 aaaggctgaa gtcatgactt aataaagtta aattgtttat ttttgtatag tgaaaaaaaa
     1741 aaaaaaaa
//
