LOCUS       NM_019877                937 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus coatomer protein complex, subunit zeta 2 (Copz2),
            mRNA.
ACCESSION   NM_019877
VERSION     NM_019877.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 937)
  AUTHORS   Wegmann,D., Hess,P., Baier,C., Wieland,F.T. and Reinhard,C.
  TITLE     Novel isotypic gamma/zeta subunits reveal three coatomer complexes
            in mammals
  JOURNAL   Mol Cell Biol 24 (3), 1070-1080 (2004)
   PUBMED   14729954
REFERENCE   2  (bases 1 to 937)
  AUTHORS   Futatsumori,M., Kasai,K., Takatsu,H., Shin,H.W. and Nakayama,K.
  TITLE     Identification and characterization of novel isoforms of COP I
            subunits
  JOURNAL   J Biochem 128 (5), 793-801 (2000)
   PUBMED   11056392
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AB040137.1.
            
            On Apr 6, 2007 this sequence version replaced NM_019877.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AB040137.1, AB047850.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-937               AB040137.1         4-940
FEATURES             Location/Qualifiers
     source          1..937
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 60.13 cM"
     gene            1..937
                     /gene="Copz2"
                     /gene_synonym="1110012D12Rik; zeta2-COP"
                     /note="coatomer protein complex, subunit zeta 2"
                     /db_xref="GeneID:56358"
                     /db_xref="MGI:MGI:1929008"
     exon            1..121
                     /gene="Copz2"
                     /gene_synonym="1110012D12Rik; zeta2-COP"
                     /inference="alignment:Splign:2.1.0"
     CDS             20..637
                     /gene="Copz2"
                     /gene_synonym="1110012D12Rik; zeta2-COP"
                     /note="nonclathrin coat protein zeta2-COP; zeta-2 COP;
                     zeta-2-coat protein"
                     /codon_start=1
                     /product="coatomer subunit zeta-2"
                     /protein_id="NP_063930.1"
                     /db_xref="CCDS:CCDS25305.1"
                     /db_xref="GeneID:56358"
                     /db_xref="MGI:MGI:1929008"
                     /translation="MQRPEAWPRPHPGEGASAAQAGGAAPPTRATEQREPSLYTIKAV
                     FILDNDGRRLLAKYYDDTFPSVKEQMVFEKNVFNKTSRTESEIAFLGGMTIVYKSSID
                     IFLYVVGSSSENELMLMSVLACLFDSLSHILRKNVEKRWLLENMDGAFLVLDETVDGG
                     VILESDPQQVIQKVNFRTDDSGLTEQSVAQVLQSAKEQIKWSLLK"
     exon            122..190
                     /gene="Copz2"
                     /gene_synonym="1110012D12Rik; zeta2-COP"
                     /inference="alignment:Splign:2.1.0"
     exon            191..272
                     /gene="Copz2"
                     /gene_synonym="1110012D12Rik; zeta2-COP"
                     /inference="alignment:Splign:2.1.0"
     exon            273..364
                     /gene="Copz2"
                     /gene_synonym="1110012D12Rik; zeta2-COP"
                     /inference="alignment:Splign:2.1.0"
     exon            365..420
                     /gene="Copz2"
                     /gene_synonym="1110012D12Rik; zeta2-COP"
                     /inference="alignment:Splign:2.1.0"
     exon            421..498
                     /gene="Copz2"
                     /gene_synonym="1110012D12Rik; zeta2-COP"
                     /inference="alignment:Splign:2.1.0"
     exon            499..550
                     /gene="Copz2"
                     /gene_synonym="1110012D12Rik; zeta2-COP"
                     /inference="alignment:Splign:2.1.0"
     exon            551..589
                     /gene="Copz2"
                     /gene_synonym="1110012D12Rik; zeta2-COP"
                     /inference="alignment:Splign:2.1.0"
     exon            590..930
                     /gene="Copz2"
                     /gene_synonym="1110012D12Rik; zeta2-COP"
                     /inference="alignment:Splign:2.1.0"
     regulatory      904..909
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Copz2"
                     /gene_synonym="1110012D12Rik; zeta2-COP"
                     /note="hexamer: AATAAA"
     polyA_site      930
                     /gene="Copz2"
                     /gene_synonym="1110012D12Rik; zeta2-COP"
                     /note="major polyA site"
ORIGIN      
        1 agtgcaggca gcgagcggaa tgcagcggcc ggaggcctgg ccacgtccgc acccggggga
       61 gggggcctca gccgcccaag ccgggggcgc agcgccgccc acccgagcca cggaacagcg
      121 ggaaccttct ctctacacca tcaaggctgt cttcatctta gataatgacg ggcgaaggct
      181 gctggccaag tattatgacg acacatttcc ctccgtgaag gagcagatgg ttttcgagaa
      241 aaatgtcttc aacaagacca gccgcaccga aagtgaaatt gcatttttgg ggggcatgac
      301 tatcgtctac aagagcagca ttgacatctt cctgtatgtg gtgggatctt cctccgagaa
      361 tgagctgatg ctcatgtctg tgcttgcctg cctgtttgac tctctgagcc acatcttaag
      421 gaagaacgtg gagaaacgct ggttgctgga gaacatggac ggagccttct tggtgctgga
      481 tgaaactgtc gatggaggtg tgattctgga gagcgacccc cagcaagtga tccagaaagt
      541 gaattttagg actgatgaca gtggcctaac agaacagagt gtggcccagg ttcttcagtc
      601 agccaaggaa cagattaaat ggtcgctatt gaaatgaaga ccttggaatc aaggctcctt
      661 ccccagagaa cttttgccag tccccgcgta agccccaaga tctcaagacg caagagagac
      721 cactctgcct tctcaggcct ctctcagaac tgatccctga ggtctcctgc cagggattct
      781 gagacgcaaa agcttgaccc cagctccctc acccctactc agcatcctaa cctggccttg
      841 gggccatggg aaccagcaaa gttgcctccc ctcggacctc tgacatcctc agtcctaggc
      901 cttaataaac ttacattttt cccccccaaa aaaaaaa
//
