LOCUS       NM_027174               6128 bp    mRNA    linear   ROD 12-JUN-2024
DEFINITION  Mus musculus collagen, type XXII, alpha 1 (Col22a1), mRNA.
ACCESSION   NM_027174 XM_907370 XM_981889
VERSION     NM_027174.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 6128)
  AUTHORS   Leung,A.O.W., Poon,A.C.H., Wang,X., Feng,C., Chen,P., Zheng,Z.,
            To,M.K., Chan,W.C.W., Cheung,M. and Chan,D.
  TITLE     Suppression of apoptosis impairs phalangeal joint formation in the
            pathogenesis of brachydactyly type A1
  JOURNAL   Nat Commun 15 (1), 2229 (2024)
   PUBMED   38472182
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6128)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   3  (bases 1 to 6128)
  AUTHORS   Lipp,S.N., Jacobson,K.R., Colling,H.A., Tuttle,T.G., Miles,D.T.,
            McCreery,K.P. and Calve,S.
  TITLE     Mechanical loading is required for initiation of extracellular
            matrix deposition at the developing murine myotendinous junction
  JOURNAL   Matrix Biol 116, 28-48 (2023)
   PUBMED   36709857
REFERENCE   4  (bases 1 to 6128)
  AUTHORS   Zhao,W., Wiedemann,P., Wolfel,E.M., Neven,M., Peters,S., Imhof,T.,
            Koch,M., Busse,B., Amling,M., Schinke,T. and Yorgan,T.A.
  TITLE     Decreased Trabecular Bone Mass in Col22a1-Deficient Mice
  JOURNAL   Cells 10 (11), 3020 (2021)
   PUBMED   34831244
  REMARK    GeneRIF: Decreased Trabecular Bone Mass in Col22a1-Deficient Mice.
            Publication Status: Online-Only
REFERENCE   5  (bases 1 to 6128)
  AUTHORS   Holmes,G., Gonzalez-Reiche,A.S., Lu,N., Zhou,X., Rivera,J.,
            Kriti,D., Sebra,R., Williams,A.A., Donovan,M.J., Potter,S.S.,
            Pinto,D., Zhang,B., van Bakel,H. and Jabs,E.W.
  TITLE     Integrated Transcriptome and Network Analysis Reveals
            Spatiotemporal Dynamics of Calvarial Suturogenesis
  JOURNAL   Cell Rep 32 (1), 107871 (2020)
   PUBMED   32640236
REFERENCE   6  (bases 1 to 6128)
  AUTHORS   Naba,A., Clauser,K.R., Mani,D.R., Carr,S.A. and Hynes,R.O.
  TITLE     Quantitative proteomic profiling of the extracellular matrix of
            pancreatic islets during the angiogenic switch and insulinoma
            progression
  JOURNAL   Sci Rep 7, 40495 (2017)
   PUBMED   28071719
  REMARK    Publication Status: Online-Only
REFERENCE   7  (bases 1 to 6128)
  AUTHORS   Tamplin,O.J., Cox,B.J. and Rossant,J.
  TITLE     Integrated microarray and ChIP analysis identifies multiple Foxa2
            dependent target genes in the notochord
  JOURNAL   Dev Biol 360 (2), 415-425 (2011)
   PUBMED   22008794
REFERENCE   8  (bases 1 to 6128)
  AUTHORS   Juan,A.H., Derfoul,A., Feng,X., Ryall,J.G., Dell'Orso,S., Pasut,A.,
            Zare,H., Simone,J.M., Rudnicki,M.A. and Sartorelli,V.
  TITLE     Polycomb EZH2 controls self-renewal and safeguards the
            transcriptional identity of skeletal muscle stem cells
  JOURNAL   Genes Dev 25 (8), 789-794 (2011)
   PUBMED   21498568
REFERENCE   9  (bases 1 to 6128)
  AUTHORS   Shimogori,T., Lee,D.A., Miranda-Angulo,A., Yang,Y., Wang,H.,
            Jiang,L., Yoshida,A.C., Kataoka,A., Mashiko,H., Avetisyan,M.,
            Qi,L., Qian,J. and Blackshaw,S.
  TITLE     A genomic atlas of mouse hypothalamic development
  JOURNAL   Nat Neurosci 13 (6), 767-775 (2010)
   PUBMED   20436479
REFERENCE   10 (bases 1 to 6128)
  AUTHORS   Blackshaw,S., Harpavat,S., Trimarchi,J., Cai,L., Huang,H.,
            Kuo,W.P., Weber,G., Lee,K., Fraioli,R.E., Cho,S.H., Yung,R.,
            Asch,E., Ohno-Machado,L., Wong,W.H. and Cepko,C.L.
  TITLE     Genomic analysis of mouse retinal development
  JOURNAL   PLoS Biol 2 (9), E247 (2004)
   PUBMED   15226823
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC168214.7, AC123689.8 and AC157602.9.
            
            On or before Jul 26, 2009 this sequence version replaced
            XM_907370.3, XM_981889.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR10223971.15233.1,
                                           SRR10223970.17563.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-395               AC168214.7         24056-24450
            396-547             AC168214.7         48749-48900
            548-1114            AC168214.7         51095-51661
            1115-1189           AC123689.8         13619-13693
            1190-1301           AC123689.8         20376-20487
            1302-1425           AC123689.8         24962-25085
            1426-1701           AC123689.8         28412-28687
            1702-1782           AC123689.8         31966-32046
            1783-1899           AC123689.8         33176-33292
            1900-1944           AC123689.8         36538-36582
            1945-2007           AC123689.8         37658-37720
            2008-2046           AC123689.8         39616-39654
            2047-2100           AC123689.8         49751-49804
            2101-2154           AC123689.8         49955-50008
            2155-2208           AC123689.8         51147-51200
            2209-2253           AC123689.8         51634-51678
            2254-2307           AC123689.8         57888-57941
            2308-2352           AC123689.8         59201-59245
            2353-2397           AC123689.8         64284-64328
            2398-2427           AC123689.8         64711-64740
            2428-2481           AC123689.8         64984-65037
            2482-2535           AC123689.8         68865-68918
            2536-2589           AC123689.8         79381-79434
            2590-2643           AC123689.8         86490-86543
            2644-2697           AC123689.8         87168-87221
            2698-2751           AC123689.8         89555-89608
            2752-2805           AC123689.8         91233-91286
            2806-2850           AC123689.8         94683-94727
            2851-2913           AC123689.8         95247-95309
            2914-2967           AC123689.8         95746-95799
            2968-3009           AC123689.8         99469-99510
            3010-3042           AC123689.8         103189-103221
            3043-3096           AC123689.8         104402-104455
            3097-3150           AC123689.8         104711-104764
            3151-3204           AC123689.8         105540-105593
            3205-3258           AC123689.8         107460-107513
            3259-3312           AC123689.8         110088-110141
            3313-3417           AC123689.8         111735-111839
            3418-3462           AC123689.8         112766-112810
            3463-3540           AC157602.9         207227-207304       c
            3541-3576           AC157602.9         197426-197461       c
            3577-3630           AC157602.9         195732-195785       c
            3631-3675           AC157602.9         194582-194626       c
            3676-3723           AC157602.9         191253-191300       c
            3724-3837           AC157602.9         186581-186694       c
            3838-3891           AC157602.9         182872-182925       c
            3892-3945           AC157602.9         174160-174213       c
            3946-3999           AC157602.9         171791-171844       c
            4000-4053           AC157602.9         166895-166948       c
            4054-4107           AC157602.9         162949-163002       c
            4108-4161           AC157602.9         157691-157744       c
            4162-4215           AC157602.9         153312-153365       c
            4216-4260           AC157602.9         148257-148301       c
            4261-4314           AC157602.9         147551-147604       c
            4315-4368           AC157602.9         145652-145705       c
            4369-4422           AC157602.9         141566-141619       c
            4423-4494           AC157602.9         140155-140226       c
            4495-4530           AC157602.9         138448-138483       c
            4531-4575           AC157602.9         136669-136713       c
            4576-4755           AC157602.9         133517-133696       c
            4756-4822           AC157602.9         131836-131902       c
            4823-5005           AC157602.9         129735-129917       c
            5006-5083           AC157602.9         127498-127575       c
            5084-6128           AC157602.9         124097-125141       c
FEATURES             Location/Qualifiers
     source          1..6128
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="15"
                     /map="15 32.31 cM"
     gene            1..6128
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /note="collagen, type XXII, alpha 1"
                     /db_xref="GeneID:69700"
                     /db_xref="MGI:MGI:1916950"
     exon            1..395
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            396..547
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             430..5271
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /codon_start=1
                     /product="collagen alpha-1(XXII) chain precursor"
                     /protein_id="NP_081450.1"
                     /db_xref="CCDS:CCDS49627.1"
                     /db_xref="GeneID:69700"
                     /db_xref="MGI:MGI:1916950"
                     /translation="MPVFTSRRAMAVPRGNPLACLLWILLLWGGDGGCQAQRAGCKSV
                     QYDLVFLLDTSSSVGKEDFEKVRQWVANLVDTFEVGPGHTRVGVVRYSDRPTTAFELG
                     HFNSREEVKAAARRITYHGGNTNTGDALRYITSRSFSAQAGGRPGNRAFKQVAILLTD
                     GRSQDLVLDAAAAAHAAGIRIFAVGVGAALKEELDEIASEPKSAHVFHVSDFNAIDKI
                     RGKLRRRLCENVLCPSVRVEGDRFKHTNGGTKEITGFDLMDLFSVKEILGKRENGAQS
                     SYVRMGSFPVVQRTEDVFPQGLPDEYAFVTTFRFRKTSRKEDWYIWQVIDQYGIPQVS
                     IRLDGENKAVEYNAVGAMKDAVRVVFRGPRVDDLFDRDWHKMALSIQAQNVSLYIDCL
                     LVQTLPIEERENIDIQGKTVIGKRLYDSVPIDFDLQRIVIYCDSRHAELETCCDIPLG
                     PCQVTVVTEPPPAPPQLPTPGSEQIGFLKTINCSCPPGEKGERGFAGPLGLPGQKGDA
                     GPIGLMGAPGPKGEKGDSGRGPFIHGEKGEKGSLGPPGPPGRDGSKGMRGEPGELGEP
                     GLPGEVGMRGPQGPPGLPGPAGPVGAPGLRGERGERGPPGEKGERGLDGFPGKPGETG
                     EQGRPGPPGVAGLQGEKGDVGPAGPPGVPGSVVQREGLKGEQGAPGPRGHQGLPGPPG
                     APGLIGPEGRDGPPGPPGLRGKKGEMGPPGTPGALGPQGPPGPPGVPGPPGPGGPPGL
                     PGELGFPGKPGPAGHAGTPGKDGLNGPPGLPGSKGEPGDSGESGVPGMPGPRGEVGER
                     GLAGHPGEKGEVGLPGAPGFPGVHGEKGDQGEKGELGLPGLKGARGEKGEVGPAGPPG
                     LPGSPSVFTPHPRMPGEQGPKGEKGDPGEPGALGPQGHPGELGPRGPIGPPGAKGHDG
                     AQGPPGAAGNPGAPGPAGPPGLSGPPGSLGSPGVRGAPGKDGERGEKGTAGEEGSPGP
                     AGPRGDPGAPGLPGPPGKGKDGEPGLRGPPGLPGPLGIKGDRGTPGIPGSPGSRGDPG
                     IGVAGPPGPSGRPGDKGPPGSRGLPGFPGPQGPAGQDGAPGNPGERGPPGKPGPSSLL
                     SPEDINLLVKDVCNDCPPGPPGLPGLPGFKGDKGLPGKQGREGTEGKKGDTGPPGPPG
                     PPGVAGPQGSQGERGAEGEVGQKGEQGHPGVPGFMGPPGNPGPPGADGNAGVAGPPGP
                     QGPQGKEGPPGPQGPSGIPGVPGEEGKQGRDGKPGPPGEPGKTGEPGLSGAEGARGPP
                     GFKGHTGDPGPPGLRGEPGIAGPSGRDGSPGKDGDTGPAGPQGPRGTRGPPGSSGSPG
                     SPGDPGRPGALGQKGNKGESGSPGLPGFQGPRGPPGEAGEVGAPGKEGAPGKPGEPGS
                     KGERGDPGIKGDKGPPGGKGQPGDPGTPGHKGHTGLMGPQGQPGESGPPGPPGPPGQP
                     GFPGLRGESPSMDTLRRLIQEELGKQLEAKLAYLLAQMPPAHMKSSQGRPGPPGPPGK
                     DGLPGRTGPMGEPGRPGQGGLEGPSGPMGPKGERGAKGDPGTPGVGLRGEMGPPGIPG
                     QPGEPGYAKDGLPGSPGPQGETGLAGHPGPPGPPGPPGLCDPSQCAYFASLAARPSNV
                     KGP"
     exon            548..1114
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1115..1189
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1190..1301
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1302..1425
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1426..1701
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1702..1782
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1783..1899
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1900..1944
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1945..2007
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2008..2046
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2047..2100
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2101..2154
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2155..2208
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2209..2253
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2254..2307
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2308..2352
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2353..2397
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2398..2427
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2428..2481
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2482..2535
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2536..2589
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2590..2643
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2644..2697
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2698..2751
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2752..2805
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2806..2850
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2851..2913
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2914..2967
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2968..3009
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            3010..3042
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            3043..3096
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            3097..3150
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            3151..3204
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            3205..3258
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            3259..3312
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            3313..3417
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            3418..3462
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            3463..3540
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            3541..3576
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            3577..3630
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            3631..3675
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            3676..3723
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            3724..3837
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            3838..3891
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            3892..3945
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            3946..3999
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            4000..4053
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            4054..4107
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            4108..4161
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            4162..4215
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            4216..4260
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            4261..4314
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            4315..4368
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            4369..4422
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            4423..4494
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            4495..4530
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            4531..4575
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            4576..4755
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            4756..4822
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            4823..5005
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            5006..5083
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            5084..6128
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      6108..6113
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /note="hexamer: AATAAA"
     polyA_site      6128
                     /gene="Col22a1"
                     /gene_synonym="2310067L16Rik"
                     /note="major polyA site"
ORIGIN      
        1 gaaacccaga gaccggccag tgagcccctg gggaggccta gggcagcttt gttcctggac
       61 agcacaggct ggagagggct gtggcttctc cctgaggacc cgcttggccc ttttctgctt
      121 tgccctctct cacacacttg ccattcttct ctgtaacttt cagcttttcc ctccaactgc
      181 tgccttgaaa gctagctctg tttctggacc catggtctag gggaagactc ccacatttta
      241 ggacttcttt cagtggcagg cagggtgtct gtatgctaca ggggaatccc agaaggggac
      301 tgcctgagac tgggatcttc cctgaaccct gcttccagta gttctgatcc caggacacaa
      361 gcccaggctg gatcccttga acatcatcct agcaggaaat gctccactag acctcttcct
      421 gaccaagata tgcctgtctt cacgagcagg agagccatgg ctgtccccag agggaatcct
      481 ttggcctgtc ttctgtggat tctactgctc tggggagggg atggtggctg ccaggcccaa
      541 cgtgcaggtt gcaaaagtgt gcagtatgat ctggtcttcc tcctggacac gtcttctagt
      601 gtgggcaagg aggactttga gaaagtccgc cagtgggtag ccaacctggt agacaccttt
      661 gaggtgggcc ctggccacac ccgtgtgggg gttgtgcgct acagtgaccg gcccactaca
      721 gcctttgaac tgggccactt caactctcgc gaggaggtga aggcagctgc gcggcgcatc
      781 acctaccatg gcggtaacac gaacacgggt gacgccctgc gttatatcac cagccgcagc
      841 ttctccgccc aggccggcgg cagacctggg aatcgtgcct tcaagcaggt ggccatcctg
      901 ttgactgatg gtcgtagcca agacctggtg ctggatgctg cagcagctgc ccatgcagcc
      961 ggcatccgca tttttgctgt tggtgtgggt gcagcattga aggaggaact ggatgagatt
     1021 gcctcagaac ccaagtctgc gcatgtcttc catgtttccg acttcaatgc cattgacaag
     1081 atccgtggca agctgaggcg tcggctttgt gaaaatgtgc tctgcccaag tgtccgggta
     1141 gaaggagatc ggtttaaaca taccaatgga ggaaccaagg aaattacagg ttttgacttg
     1201 atggatttgt tcagtgtgaa ggaaatcttg gggaagagag aaaacggagc ccagagttcc
     1261 tatgtacgga tgggttcctt ccctgtggtg cagagaactg aagatgtgtt tccccaaggt
     1321 cttcctgatg agtatgcctt tgtcacaact ttccggttcc ggaaaacatc acggaaagaa
     1381 gattggtaca tctggcaagt cattgaccag tatggcatcc cacaggtctc tatccggctg
     1441 gatggtgaga acaaggcagt tgagtacaac gctgtgggtg ccatgaagga tgctgtccgg
     1501 gtggtcttcc gaggcccccg agttgatgac ctctttgacc gtgactggca caagatggct
     1561 ctaagcatcc aggcccagaa tgtgtccctc tacattgact gtttgctggt tcagacgctg
     1621 cctattgagg agagggagaa tatcgacatc cagggcaaga ctgtgattgg caaacgtctc
     1681 tatgacagcg ttcccattga ttttgacctg cagcggattg tgatttactg tgactcgaga
     1741 catgcagaac tggagacttg ctgtgacatc ccgttgggtc cgtgtcaggt gactgtggtg
     1801 acagagccgc cacctgcgcc tccacagctg cccacccctg ggagcgaaca gatcgggttc
     1861 ttgaagacca tcaactgctc atgccctcct ggagaaaagg gtgagagggg ctttgctggc
     1921 cctctgggac tccctggtca gaagggagat gcaggaccca ttggactaat gggtgctcct
     1981 ggacccaagg gagaaaaagg agacagtgga cgaggaccat tcatccatgg ggaaaagggt
     2041 gagaagggat ccctgggccc acctgggccc cctggaagag acggcagtaa aggcatgaga
     2101 ggagagccag gagagctagg agagccaggg ctgcctggag aagtgggcat gagggggccc
     2161 cagggacctc ctggactacc agggcctgct gggccagttg gagctccagg tcttcgagga
     2221 gaacgaggtg aaagggggcc tccaggagaa aagggggagc gaggcctgga tggattccct
     2281 gggaagcctg gagagactgg agagcaggga agacctgggc ctcctggtgt ggcaggactg
     2341 cagggagaga agggagatgt ggggcctgca ggaccccctg gtgtgccagg ctctgtggtg
     2401 cagagggaag gcctgaaggg agagcaggga gcccccggac caagaggtca ccaaggccta
     2461 cctgggcctc caggagcacc tggtttgatt ggcccagaag gcagagatgg acccccgggg
     2521 cctccaggtc tccgagggaa gaaaggagaa atgggtcccc caggaacccc tggagcactg
     2581 gggccacagg gcccgcctgg accacccggt gttccagggc cccctggacc tggaggaccc
     2641 ccgggtttac ctggcgagct cggcttcccg ggaaaacctg ggcctgctgg gcatgcgggg
     2701 acacctggaa aggatgggct gaatggacca ccaggccttc ctggctccaa gggagaacca
     2761 ggagactctg gcgaaagtgg cgtacctgga atgccaggac ctcggggtga agttggggag
     2821 cggggccttg caggtcatcc tggtgagaag ggagaagttg gccttccggg tgctccaggc
     2881 ttcccaggag tacatggaga gaaaggagac cagggagaaa aaggtgaact gggacttcca
     2941 ggtctgaaag gtgcccgagg agaaaagggt gaggttggtc cagcaggtcc ccctggctta
     3001 cctggaagtc catcagtgtt cacaccacac ccaagaatgc caggagagca agggcctaaa
     3061 ggagagaaag gtgatcctgg cgagcctgga gccctgggac cacagggcca tcctggagaa
     3121 ttgggtcctc ggggacccat tggacctccg ggtgccaagg ggcatgatgg tgcacaagga
     3181 cctcctggag cagctggaaa ccctggtgct ccaggacctg caggaccccc tggtctcagt
     3241 ggaccccctg gaagtttggg ttctcctggt gtcaggggtg cccctgggaa agatggggag
     3301 cgtggagaga agggaacagc aggggaagaa ggcagcccag ggccagctgg tccacgggga
     3361 gatcctggtg ctcctggtct cccagggcca ccaggaaagg gcaaggatgg ggagccggga
     3421 ctacgtggac cacctgggtt acctggtccc ttaggaatca agggtgaccg aggaacacct
     3481 gggattcctg gctctcctgg cagccgtggt gacccaggca ttggggttgc tggtccacct
     3541 ggtccctcag gacgaccagg agataaagga cccccgggat ctcgaggctt acctggattc
     3601 cccggccccc agggaccagc tggccaggat ggtgcaccag gaaacccagg agaaagaggg
     3661 cctcctggaa aaccaggccc ttcttcactg ctgtctccag aggacataaa tctcttagta
     3721 aaggatgtgt gcaacgactg ccctcctggt cccccaggcc tcccaggtct gccaggtttc
     3781 aaaggggaca agggtcttcc aggaaaacaa gggagagagg ggacagaagg caaaaaggga
     3841 gataccgggc ctccaggccc ccctgggcct ccaggagtag ctggaccaca gggaagccaa
     3901 ggagaacgtg gtgcagaggg tgaggtggga cagaaaggtg aacagggtca ccctggagtt
     3961 ccaggcttca tgggcccacc ggggaatcct gggccaccag gagcagatgg gaatgcaggt
     4021 gtggcggggc caccaggacc tcaagggcct cagggcaaag aaggccctcc tggtccccaa
     4081 ggtccatctg gcatcccagg agtcccagga gaagaaggca agcagggcag agatggaaag
     4141 ccaggtcccc ctggagaacc gggcaagaca ggagagccag gcctatcagg agcagaggga
     4201 gccagaggtc caccgggctt caagggacac acaggtgatc ctggcccacc tggtctgagg
     4261 ggagaacctg gcatagcagg accctctgga agggatggat caccaggaaa agatggtgac
     4321 actggacctg ctggaccaca gggtcccaga ggaacaaggg gaccaccggg cagcagtgga
     4381 tcacctggat ctccaggaga ccctggccgt ccgggagccc taggccagaa gggaaacaaa
     4441 ggagaaagtg gcagcccagg acttccaggg tttcagggtc ctcgtggacc tccaggagaa
     4501 gcaggagagg taggagctcc aggaaaggag ggtgctcctg ggaagcctgg agagccagga
     4561 tccaaaggcg agaggggaga ccctgggatc aaaggtgaca aaggaccacc aggtgggaag
     4621 ggtcagcctg gagaccctgg aaccccaggc cacaagggtc atactggcct aatgggtccc
     4681 caaggacaac caggagagag tggccctcct gggcccccag ggccacctgg ccagccagga
     4741 tttccaggac tgagggggga gtctccatcc atggacacct tacggcgcct cattcaggaa
     4801 gagcttggga agcagctaga agctaaactt gcctacctcc tagcccagat gcctccagca
     4861 cacatgaagt cctctcaagg cagacccgga cctcctggac cccctggaaa agatgggctg
     4921 ccaggtcgga caggccccat gggtgagcca ggccgtcctg gccaaggtgg tctggaagga
     4981 ccctctggac caatgggccc caaaggtgaa agaggagcca aaggtgaccc tggcacacct
     5041 ggagttggtc tccgaggaga gatgggtcct cctggaatac caggccaacc tggggaacct
     5101 ggatacgcta aagatggact tccaggaagc cctggtcctc aaggagagac aggactagct
     5161 ggacatcctg gccctcctgg tcctcctggc ccacctggcc tgtgtgaccc ctcccagtgt
     5221 gcgtactttg ccagccttgc tgcccggcca agtaatgtga agggcccata gaagattcta
     5281 gatcatcaaa acactactat ggatttctga aacttgaact cggagcccat tgggaagcca
     5341 gaagccttga aacatttcaa atccttcttc tctctcccct tcctacttcc cgccttttct
     5401 tcctgcttcc cctctttcta gtcttttctc cttgcctgcc ttaattgtct tttcccgtcc
     5461 tcagagacct cacagttatt aaaaccaaca gatactgtca gacagtcagg ttattattaa
     5521 tattattgtt attgtttgct gttatttcaa aggctaatag ttttgaggga gcttcctggt
     5581 ggacaggaag cagtttcctg gctcagctcc cctgtcatca ctggctgaag tgtgacagcc
     5641 aatttctgag gaaccctcgg tgctatgcaa ccctgaccat gtatgcactt gttgatttta
     5701 cctctttcct ggaaaggaag ctttaaggga tggagactgt attgttgttt cctcagctgt
     5761 gcctaaagat ggcccaggga aaagtaagtt tgaaatcccc acctctccag agagacttga
     5821 agcaagaaga agaatttgca gcctaaaaga attcattgac ctctggagac aaggtgcaca
     5881 tctggagttc agaactgcct cagggcattg gggggaaggt ggttatcctt ggtgcttcag
     5941 gctaccagaa ctccaaaaga agtcacatag tattggcagt agcttgtgtc agggccctct
     6001 atgaacaagc tggtgctgaa gaagagttcc caggtgtgac ttcacttcta actgtggcct
     6061 gaaccccttc aagttcctca tgctggtttc aattgtgtga gttgcaaaat aaaagttttc
     6121 aatggtca
//
