LOCUS       XM_006507699            2947 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus component of oligomeric golgi complex 7
            (Cog7), transcript variant X1, mRNA.
ACCESSION   XM_006507699
VERSION     XM_006507699.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000073.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006507699.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2947
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="7"
     gene            1..2947
                     /gene="Cog7"
                     /gene_synonym="5630400E24Rik; Gm167"
                     /note="component of oligomeric golgi complex 7; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 mRNAs, 4 ESTs, 286 long SRA reads, and 98% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 34 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:233824"
                     /db_xref="MGI:MGI:2685013"
     CDS             133..2481
                     /gene="Cog7"
                     /gene_synonym="5630400E24Rik; Gm167"
                     /codon_start=1
                     /product="conserved oligomeric Golgi complex subunit 7
                     isoform X1"
                     /protein_id="XP_006507762.2"
                     /db_xref="GeneID:233824"
                     /db_xref="MGI:MGI:2685013"
                     /translation="MDFSKFLADDFDVKDWINAAFRAGPKDGAAGKADGHAATLVMKL
                     QLFIQEVNHAVEETSLQALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFEQDTS
                     QSMQVLVEIDQVKSRMQLAAESLQEADKWSTLSADIEETFKTQDIAVISAKLTGMQNS
                     LMMLVDTPDYSEKCVHLEALKNRLEALASPQIVASFTSQSVDQSKVFVKVFTEIDRMP
                     QLLAYYYKCHKVQLLATWQELCQSDLPLDRQLTGLYDALLGAWHTQTQWATQVFKNPH
                     EVVTVLLIQTLGALVPSLPMCLSAGVERAGPELELTRLLEFYDTTAHFAKGLEMALLP
                     HLQDHNLVKVVELVDAVYGPYKPFQLKYGDMEENNLLIQISAVPLEHGEVIDCVQELS
                     HSVHKLFGLASAAVDRCAKFTNGLGTCGLLTALKSLFAKYVSHFTNALQSIRKKCKLD
                     DIPPNSLFQEDWTAFQNSVRIIATCGELLRQCGDFEQQLANRILSTAGKYLSDSYSPR
                     SLAGFQDSILTDKKSPAKNPWQEYNYLQKDNPAEYASLMEILYTLKEKGSSNHNLLSA
                     SRTALTRLNQQAHQLAFDSVFLRIKQQLLLVSRMDSWNTAGIGETLTDDLPAFSLTPL
                     EYISNIGQYIMSLPLNLEPFVTQEDSALELALHAGKLPFPPEQGMCAPPALWELAGDE
                     LPELDNMADNWLGSIARATMQTYCDVILQIPEVTPHSTKQLATDIDYLINVMDALGLQ
                     PSRTLQNIAALLKAKPEEYRQVSKGLPRRLAATVATMRGVNY"
ORIGIN      
        1 aagtacggcg cgcgacgagg gacattcggc ctcggcgcga gtgcgctgac ggggcggcaa
       61 gtaaagcttg gtgggtttcg acgggtgtcc cgaaggcggt gtcgctcggc gccaacccgg
      121 agaccgcgcg ccatggactt ctccaagttc ctggctgacg acttcgacgt gaaggactgg
      181 attaatgcgg ccttcagagc cggccccaaa gacggggcgg cggggaaggc ggacggtcac
      241 gcagccaccc tggtaatgaa gctgcagctg ttcatccagg aggtgaacca cgccgtggag
      301 gaaacaagtc tccaggccct ccagaacatg cccaaagtgc tccgtgatgt ggaagccctg
      361 aagcaggagg cgtctttcct gaaagagcaa atgattcttg tcaaagagga cattaaaaag
      421 tttgagcagg acacgtcaca gtccatgcag gtgctggtag agattgacca ggtgaagtcc
      481 aggatgcagc ttgctgcgga atctcttcag gaagctgaca agtggagcac gctgagtgct
      541 gatattgagg agaccttcaa aactcaagac atagctgtga tttctgcaaa gctgaccggc
      601 atgcagaaca gcttgatgat gcttgtggat actccggact actctgaaaa gtgtgtgcac
      661 ctggaggctc tgaagaacag actggaggcc ctggccagcc cccagatcgt agcatcgttc
      721 acctctcagt ctgtggatca gtctaaagtg tttgtgaagg tgtttactga aatcgaccgg
      781 atgccccagc tccttgcata ctactacaag tgtcacaagg tacagcttct agcaacctgg
      841 caagagctgt gtcagagtga ccttccactg gaccggcagc tcactggcct ctatgatgcc
      901 ctgcttggcg cgtggcacac acaaacccag tgggccacac aggttttcaa gaacccccac
      961 gaggtggtga cggtgctgct gattcagacc ctgggggcct tggtgccctc cctgcccatg
     1021 tgcctcagtg caggtgtgga gagagccgga ccggagctgg agctcaccag actgctggag
     1081 ttttacgaca ccaccgccca ctttgccaag gggctggaaa tggcgctgct cccccatctc
     1141 caggaccaca acctggtgaa agttgtggag ctggtggatg ctgtgtatgg tccctataaa
     1201 cccttccagc tgaagtacgg tgacatggag gagaacaacc ttctcataca gatcagcgct
     1261 gtgcctctgg aacacgggga agtgattgac tgcgttcagg agctgagcca ctctgtgcac
     1321 aagctctttg gcttggcatc tgcagctgtt gacagatgtg ccaaattcac caatggcctg
     1381 gggacctgtg gactgctgac agccctgaaa tccctctttg ccaagtatgt gtctcacttc
     1441 accaacgctc tccagtccat tcgaaagaag tgcaagctgg atgacattcc tcccaactcc
     1501 ctgtttcagg aagactggac cgcttttcag aattcggtca ggatcatagc cacctgtgga
     1561 gagctcttgc gccagtgtgg ggactttgag cagcagctgg caaacaggat cctgtccaca
     1621 gcggggaagt atctgtctga ctcctacagc cctcggagcc tggcaggttt tcaggacagc
     1681 atcttgacag acaagaagag ccctgccaag aacccatggc aggaatataa ttacctccag
     1741 aaagataacc ctgctgaata tgccagttta atggaaatac tttataccct caaggagaag
     1801 ggctccagta accacaacct actgtctgcg tcacgcacag ccctgacccg gctgaaccag
     1861 caggcccacc agctggcttt cgactcggtc ttcttgcgca tcaaacagca gctgctgctc
     1921 gtttccagga tggatagctg gaacacagcc ggcattggtg aaaccctgac agacgatctg
     1981 cctgccttca gcctcacacc tctcgagtac atcagcaaca ttgggcagta catcatgtcc
     2041 ctgcccctga atcttgagcc atttgtgact caagaggact ctgcattaga gttggccttg
     2101 catgctggga agctgccatt ccctcctgag caagggatgt gcgcccctcc tgctctctgg
     2161 gagctggcag gggatgaact tcccgagttg gacaacatgg ctgacaattg gctgggctcc
     2221 attgccagag ccactatgca gacctactgt gacgtgatcc tccagatccc ggaggtgacc
     2281 ccgcactcca ccaagcaact ggccaccgac atcgactatc tgatcaacgt gatggacgca
     2341 ctgggcctgc agccatcacg aaccctccag aacattgcgg cgctcttgaa ggccaagcct
     2401 gaggaatata gacaggtcag caaaggcctg ccacgccgcc ttgcagccac ggtggccacc
     2461 atgcgtggtg tgaattattg accaattgtg agaagagtgt ccaggacagg gtacaggact
     2521 ggtgactctc agaatggatt cattctcagt ggtggggcag tgtgtgtgtc tgtgtgtgtg
     2581 tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg agagagagag agagagagag agagagagca
     2641 agagagagtg agagagagag agagagagag agagagagag agagagaact ggaaattagg
     2701 catggtggta tgtgtacata agccaagcat ggtggtacat tggtacatgt ctataatccc
     2761 ttgggaggta ggggcaacag gattactgtg agtgtgatgt catcctggac tagagactca
     2821 gtatctacaa caaaaaggct ataaatgaga agtaatgtat tatttatcag agagaaattt
     2881 tcagatgatt tgtaaaaata accttatctt aaaagtgggc ttaataaaca ccgtgaagtg
     2941 ggtcaaa
//
