LOCUS       XM_030251742            5079 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus Cobl-like 1 (Cobll1), transcript variant
            X17, mRNA.
ACCESSION   XM_030251742
VERSION     XM_030251742.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000068.8) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030251742.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5079
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="2"
     gene            1..5079
                     /gene="Cobll1"
                     /gene_synonym="1810047P18Rik; Coblr1; D430044D16Rik"
                     /note="Cobl-like 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 176 ESTs, 178
                     long SRA reads, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 31 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:319876"
                     /db_xref="MGI:MGI:2442894"
     CDS             290..3955
                     /gene="Cobll1"
                     /gene_synonym="1810047P18Rik; Coblr1; D430044D16Rik"
                     /codon_start=1
                     /product="cordon-bleu protein-like 1 isoform X17"
                     /protein_id="XP_030107602.1"
                     /db_xref="GeneID:319876"
                     /db_xref="MGI:MGI:2442894"
                     /translation="MGQAVTRRLRARARAAASSAMDRSVPDPLPRSAPRTPAMQPAGS
                     AGKTKGKAPLPPAETKGTDVSSAEDPVESTAVVTEQQDNMIDKDIELSVVLPGDILKS
                     TTVHGSKPMMDLLVFLCAQYHLNPSSHTIDLLSAEENLIKFKPNTPIGMLDVEKVILK
                     PKSLDKKKPTPIIPEKTVRVVINFKKTQKTIVRVSPHAPLQDLAPIICSKCEFDPLHT
                     VLLKDYQAQEPLDLTKSLNDLGLRELYAMDISRESCQISHNPDIVKEKENKGIFSFFQ
                     RSKKKREQTASAPATPLVSKHRPSFTRSNTISKPYISNTLPSDAPKKRRAPLPPMPTS
                     QGAAQGQERRASCVERSTSVDDTDKSSSEAIMVRTGSLQLSSTSIGTSSLKRTKRKAP
                     APPSKTPLAQTDERNSAMAHGLPLEDGIAPDSMLELSSPEGMSTPAGVSSDYSLEEID
                     EKEELSEASKDPAGSISVKSPDIASASTDMRITVEKDPDSALGISDGETSPSSKGKTQ
                     EGRSTEGQGPYHPVVGHIGNEDRVSDSIKDMKTLGPNQESVQNEIMVCATSTDYVKNR
                     PGKMETTIEGEGEALKKASDMETDRLSGSPACRMDNVKSSRENHLTASPGPDQKLNQP
                     GVEKTKMQDAAIQATPARGTFDGNHEVSNSSDPRADETVQTSDGSISAQHSSASLQDS
                     VNASREFRSQGTSTYVQDRLPEKEPACTYGNNVPLSPVDGSNKNPAASYLKNFPLYRQ
                     DSNPKPKPSNEITREYIPKIGMTTYKIVPPKSLEMAKDWESEAMGRKDDQKMLPVGQR
                     HTIENMTETSMQTEVPATSKSSQQPQPDLKPKPSSGTERHLHRTLSSPTGTETNPPKA
                     PRVTTDTGTIPFAPNLEDINNILESKFRSRASNPQAKPSSFFLQMQKRASGHYVTSAA
                     AKSVHTAPGPAPKEPTIKEVQRDPQLSPEQHPSSLSERTHSAPLPNISKADDDIIQKP
                     AETSPPPVAPKPMTLRAETSPPPVFPKPMTLPAETSPPPVFPKPMTLPAETSLPLVFP
                     KPMTLRAETSPPPVAAKPVALPGSQGTSLNLKTLKTFGAPRPYSSSGPSPFALAVVKR
                     SQSFSKACPESASEGSSALPPAATQDEKTHTVNKPTVGSQHGDGDKQNNPVQNEHSSQ
                     VLTPADGPSFTLKRQSSLTFQSSDPEHVRQSLLTAIRSGEAAAKLKRVTVPSNTISVN
                     GKSGLSQSMSIDAQDSR"
ORIGIN      
        1 gggttcgcga ggcttcccaa agctactcag tgtcagtggg gactaaaacg agcagcctag
       61 acgcttcctc tccaccggcc tcccccgcgg tacctaaaag ccgcgtgctc cgcggagggg
      121 tgcggggtgg ggtaggaaat tcctcctcgc tccacgtccc cgcccgctcg ccctacccgt
      181 cccctctccg gctggctgct ctgctcgctc cgatgctgac ctcgtcaccc tcacttctgc
      241 agagcgaggt ggccgaggcg gctgcgagct cggggctccc ggcagggcca tggggcaggc
      301 agtgacgcgc cgcctccgag cccgagcccg cgccgcggcc agcagcgcga tggaccgcag
      361 cgtcccggat cccctacccc gcagcgcgcc ccgcaccccc gccatgcagc ccgcgggctc
      421 cgcagggaaa acaaaaggga aggcgcctct tcctccggcc gagacgaagg gcactgatgt
      481 ctcttctgct gaagaccctg tagaatctac tgctgtcgtc acagagcaac aagacaatat
      541 gatagataaa gatattgagc tctcagtggt cctgccggga gatatcctca agtctactac
      601 tgttcatggc agtaagccaa tgatggactt gctcgtgttc ctctgtgctc agtatcactt
      661 aaatccgtca agtcacacaa ttgatttgct ctctgctgaa gagaacctta tcaaatttaa
      721 gccaaacaca ccaataggaa tgctggatgt agagaaggta attttaaagc caaaatctct
      781 ggataagaaa aagcctacac ctataatccc agagaaaact gtgagagtag tgatcaactt
      841 taagaaaaca cagaagacca tagtgagagt tagtccccac gcaccccttc aagatcttgc
      901 tcccatcata tgcagtaaat gtgagtttga tccgttgcat accgtgctgt tgaaggatta
      961 ccaggctcag gagcccctcg acttgacaaa atctcttaat gacttgggac taagagagtt
     1021 atatgccatg gatatcagca gagagtcctg ccaaatatca cacaacccgg acattgtgaa
     1081 ggagaaagaa aacaaaggga ttttcagttt tttccaacgc agcaagaaaa agcgagagca
     1141 aactgccagt gctcctgcga ccccactagt gagcaagcat cgtccatctt tcacgaggtc
     1201 caacaccatt tccaaaccgt acatttccaa taccctgccc tcggatgcac ccaagaagag
     1261 acgtgcccca ctgccaccga tgcccacatc ccagggtgct gctcaaggcc aggagagacg
     1321 agcgtcttgt gtggagagat ccaccagtgt ggacgacaca gataagagtt cctctgaagc
     1381 gatcatggtg aggacaggat cactgcagct cagcagcacg tcgataggaa cttcatctct
     1441 gaagagaacg aagcgaaaag cacctgcccc accttcgaaa acccccctgg ctcagactga
     1501 tgaaaggaac tctgcaatgg ctcatggcct acctttggaa gatgggattg ctccagacag
     1561 catgttggaa ctgagctctc ccgagggaat gtccacccca gctggtgtaa gctctgatta
     1621 cagtcttgag gagatagatg aaaaggaaga actcagcgag gcatctaaag atccggctgg
     1681 aagtatttct gtgaagtcgc ctgacattgc ttcagcatcg actgatatga gaattacagt
     1741 ggagaaggat cctgattcag ccctcggcat cagtgatgga gagacctctc caagctccaa
     1801 gggaaaaact caagaaggca gaagcacaga ggggcaaggg ccgtatcatc ctgttgtagg
     1861 ccatataggc aatgaggaca gagtatctga cagtataaaa gacatgaaga cactgggccc
     1921 aaaccaggag agtgttcaaa atgaaatcat ggtctgtgcc acaagcacag attatgtgaa
     1981 aaacagaccg gggaaaatgg aaaccaccat agaaggcgaa ggcgaagctc tgaagaaagc
     2041 cagcgacatg gaaactgata gattgtcagg ctctcctgca tgtagaatgg acaatgttaa
     2101 aagttcgagg gaaaatcatc taacagcatc gccaggacca gatcaaaaat tgaatcaacc
     2161 aggtgtagag aagacgaaaa tgcaggatgc agcaattcag gccacccctg cccgcggcac
     2221 ttttgatggg aatcacgaag tcagtaattc atctgacccc agggctgatg agactgtgca
     2281 gacttcggat ggcagcatat cagctcagca ctcctctgca agtctccagg attctgtaaa
     2341 tgcctcaaga gaattcagga gtcagggcac ctcaacttat gtacaagata gactccctga
     2401 gaaagagcca gcttgtacat atgggaacaa tgtccctttg tcacctgtag atggaagtaa
     2461 taagaatcca gctgcttctt acctaaagaa ctttccactt tataggcaag actccaaccc
     2521 caagccaaaa ccgtcaaatg aaatcacgag agagtatata cctaaaattg gaatgactac
     2581 ttataaaata gtacctccga aatccctgga aatggcgaaa gactgggaat cagaagcaat
     2641 ggggaggaaa gatgaccaaa agatgctccc tgtagggcag aggcatacga ttgagaatat
     2701 gacagaaact tccatgcaaa cagaagtccc tgctacttct aaaagctcac agcagcctca
     2761 gcctgacctt aaaccaaagc ccagctcagg aacagagcgt catttgcaca ggactttgag
     2821 ctcaccaact ggtaccgaga cgaaccctcc caaagcaccc agagtgacta cagacactgg
     2881 caccattcct tttgcgccaa atttggaaga tataaacaat attttggagt caaaatttag
     2941 atcccgagct tcaaatcccc aggccaaacc aagttcattc tttttgcaga tgcaaaagag
     3001 agcatcaggc cactatgtga catctgcagc tgctaagagc gtccacactg cccctgggcc
     3061 tgcccctaaa gagccaacaa tcaaggaggt gcagagggac ccacagcttt ctccagaaca
     3121 gcatccttct tccttaagtg aaaggactca ctctgctccg ctgcccaata tttcaaaagc
     3181 tgatgatgat ataattcaga agcctgccga gacctctcct cctcctgtag ctcccaaacc
     3241 aatgactctt cgtgccgaga cctctcctcc tcctgtattt cccaaaccaa tgactcttcc
     3301 tgctgagacc tctcctcctc ctgtatttcc caaaccaatg actcttcctg ccgagacctc
     3361 tcttcctctt gtatttccca aaccaatgac tcttcgagcc gagacctctc ctcctcctgt
     3421 agctgccaag cctgtggctc tccctggtag tcagggaaca tcactaaacc tgaagacctt
     3481 gaaaacattt ggggccccaa gaccatactc cagttctggc ccctcaccct ttgcccttgc
     3541 tgtggtgaaa aggtcacagt cgttcagtaa ggcatgccca gagtcagcca gtgagggctc
     3601 ctctgccctg cctccagctg ccacacagga tgaaaagaca catacagtaa acaagcctac
     3661 ggtgggctcc caacatggtg atggtgataa gcaaaataat cctgtacaga atgagcacag
     3721 ttctcaagtg ctgactccag ctgatggccc atcgttcacc cttaagagac agagttctct
     3781 aacattccag agctctgacc cagagcacgt acgacagagc ttgctcactg caatccggtc
     3841 tggagaggct gctgccaagt tgaagagagt tactgttcca tcgaatacaa tatctgtgaa
     3901 tgggaagtcg ggcctcagcc agtccatgtc cattgacgcc caggacagtc gctaatatta
     3961 ccctgctgtg acacacttca ccgaccagct ttctgcctac aagaaatatt cacaaatata
     4021 tatttagatg tacattaata tataaatcta ttcaggagta aacatttgta ttatggattt
     4081 aatgccaaaa gaaaaatgaa tagaatctat aatttataat aagttttggc ctttttgtta
     4141 tagctaaata ctgctgcttt agaaatgtta aacaaggtgt aaatgacttg tttttttcca
     4201 atgaagaaca atcactgctt atggtttttt tttttcctta tggatatact gtgcaccatg
     4261 aaacaaaggt gtaaattgag atttatagac atactgtatg acacagaaac aggcaagcac
     4321 agactaacat ttactgcctc agcgttaggc tataattaga aagataattt atagtacggc
     4381 ctttgttgct gaaagacgtg gaagactagt aaatcaaata gataatgttc agttattttt
     4441 attgaagaat cactatgaga cttattttat gtattcttta attacaagtg tcagatctgt
     4501 aggtaacagt tgagtatttt taaatagaac actttaacct ttagaagtaa aattgcacaa
     4561 gaagacttta agatattttc tgtatataat tatgatgttg ttacacagat attgcatatt
     4621 ttctaatgcc agaggcctta aaatatccct gtgaaaatgt tgatacattg tggcagttat
     4681 ttcacttttg ctataaggag gaattgaggg ttagtttatg tccacattca aaactttgaa
     4741 gtcagacatt tgcaaaatcc tgattttttt ttaattaaag aaaatgctaa gttagtcatt
     4801 tatgtatctc agatgctagc catctaaata ataatatata ttttcctgaa agccaaaatc
     4861 gttgagagaa acagtacttg atgtgtcggc ttccagtggc ccagaagttt agaacgtgtt
     4921 agtgtcctgg acttccttaa taattttatt cctcttttat tcaaaagact gctcagacac
     4981 ctgacactga actttttcct aaagctactg gagtatctgt catcctgaca cataggaacc
     5041 tttttccgtt taataaaagc aagttatata tttacagtc
//
