LOCUS       NM_183270                834 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus cytochrome c oxidase assembly factor 4 (Coa4), mRNA;
            nuclear gene for mitochondrial product.
ACCESSION   NM_183270
VERSION     NM_183270.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 834)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 834)
  AUTHORS   Friedel,R.H., Seisenberger,C., Kaloff,C. and Wurst,W.
  TITLE     EUCOMM--the European conditional mouse mutagenesis program
  JOURNAL   Brief Funct Genomic Proteomic 6 (3), 180-185 (2007)
   PUBMED   17967808
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK161506.1.
            
            On Jul 1, 2006 this sequence version replaced NM_183270.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC096605.1, AK161506.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-834               AK161506.1         2-835
FEATURES             Location/Qualifiers
     source          1..834
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 54.36 cM"
     gene            1..834
                     /gene="Coa4"
                     /gene_synonym="5330414O08Rik; Chchd8; E2ig2"
                     /note="cytochrome c oxidase assembly factor 4"
                     /db_xref="GeneID:68185"
                     /db_xref="MGI:MGI:1915435"
     exon            1..93
                     /gene="Coa4"
                     /gene_synonym="5330414O08Rik; Chchd8; E2ig2"
                     /inference="alignment:Splign:2.1.0"
     exon            94..834
                     /gene="Coa4"
                     /gene_synonym="5330414O08Rik; Chchd8; E2ig2"
                     /inference="alignment:Splign:2.1.0"
     CDS             104..367
                     /gene="Coa4"
                     /gene_synonym="5330414O08Rik; Chchd8; E2ig2"
                     /note="coiled-coil-helix-coiled-coil-helix
                     domain-containing protein 8;
                     coiled-coil-helix-coiled-coil-helix domain containing 8"
                     /codon_start=1
                     /product="cytochrome c oxidase assembly factor 4 homolog,
                     mitochondrial"
                     /protein_id="NP_899093.1"
                     /db_xref="CCDS:CCDS40037.1"
                     /db_xref="GeneID:68185"
                     /db_xref="MGI:MGI:1915435"
                     /translation="MSTSVPQGHNWTRPVKKDDDEEDPLDQLITRSGCAASHFAVQEC
                     MAQHQDWRQCQPQVQAFRDCMSAQQARRREELQRRKEQASAQH"
     regulatory      792..797
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Coa4"
                     /gene_synonym="5330414O08Rik; Chchd8; E2ig2"
                     /note="hexamer: AATAAA"
     polyA_site      834
                     /gene="Coa4"
                     /gene_synonym="5330414O08Rik; Chchd8; E2ig2"
                     /note="major polyA site"
ORIGIN      
        1 ggcttcctgc ggagagaaca gggggcgtcc ttattgccta cgaatccccg cgtctggggc
       61 ggaacgcgct cgcacgctct tctgcacctg cgggttcctc aagatgtcaa cctcagtccc
      121 acaaggccat aactggactc gcccggtgaa gaaggatgat gatgaggaag acccgctgga
      181 ccagctcatc acccggtctg gctgtgcagc ctcccacttt gcagtgcaag agtgcatggc
      241 ccaacaccag gactggcgcc agtgccagcc gcaagtgcag gccttcaggg attgtatgag
      301 tgcacagcag gcaagacgga gggaggagct gcagaggagg aaagagcaag ccagtgctca
      361 acactgagac cttataccat ctcacacagt gggcctgacg aaatcagcac ccagagagac
      421 ctgggaagaa gaaaccctaa gtaatagaag tggtgtaaaa tctggggaca gtcttcggga
      481 caggattgac agccagaccc aatgaggttg cacacgacgg tcaccatgag ctgatctatg
      541 gtcagatcac acatatcctc cacattcttg ttctaccaat atttgtgttt acaaccacac
      601 tccctccacc ctacctctca gtgactgtgt gccaagtact ttataagtac atacgggttg
      661 cccaatcagg ccttcatttt ccaatcacaa atttaaccac aggaagtgtt tctaaggcat
      721 tgcgttggcg atgtgcaatt cgaagagtaa cgtgaccttc ccgttgctga gagactcagg
      781 ggacaggcag aaataaagca acactcaaag gagtgaactc ggtttccgca gtga
//
