LOCUS       NM_026618                718 bp    mRNA    linear   ROD 10-OCT-2024
DEFINITION  Mus musculus cytochrome C oxidase assembly factor 3 (Coa3), mRNA;
            nuclear gene for mitochondrial product.
ACCESSION   NM_026618
VERSION     NM_026618.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 718)
  AUTHORS   Aich,A., Boshnakovska,A., Witte,S., Gall,T., Unthan-Fechner,K.,
            Yousefi,R., Chowdhury,A., Dahal,D., Methi,A., Kaufmann,S.,
            Silbern,I., Prochazka,J., Nichtova,Z., Palkova,M., Raishbrook,M.,
            Koubkova,G., Sedlacek,R., Troder,S.E., Zevnik,B., Riedel,D.,
            Michanski,S., Mobius,W., Strobel,P., Luchtenborg,C., Giavalisco,P.,
            Urlaub,H., Fischer,A., Brugger,B., Jakobs,S. and Rehling,P.
  TITLE     Defective mitochondrial COX1 translation due to loss of COX14
            function triggers ROS-induced inflammation in mouse liver
  JOURNAL   Nat Commun 15 (1), 6914 (2024)
   PUBMED   39134548
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 718)
  AUTHORS   Baumgartner,M., Olthof,A.M., Aquino,G.S., Hyatt,K.C., Lemoine,C.,
            Drake,K., Sturrock,N., Nguyen,N., Al Seesi,S. and Kanadia,R.N.
  TITLE     Minor spliceosome inactivation causes microcephaly, owing to cell
            cycle defects and death of self-amplifying radial glial cells
  JOURNAL   Development 145 (17) (2018)
   PUBMED   30093551
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 718)
  AUTHORS   Mootha,V.K., Bunkenborg,J., Olsen,J.V., Hjerrild,M.,
            Wisniewski,J.R., Stahl,E., Bolouri,M.S., Ray,H.N., Sihag,S.,
            Kamal,M., Patterson,N., Lander,E.S. and Mann,M.
  TITLE     Integrated analysis of protein composition, tissue diversity, and
            gene regulation in mouse mitochondria
  JOURNAL   Cell 115 (5), 629-640 (2003)
   PUBMED   14651853
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK019025.1.
            
            On Apr 6, 2007 this sequence version replaced NM_026618.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK019025.1, DV064362.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849389, SAMN01164131
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-718               AK019025.1         3-720
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 64.56 cM"
     gene            1..718
                     /gene="Coa3"
                     /gene_synonym="1810033A19Rik; Ccdc56; D11Ertd99e; HSPC009"
                     /note="cytochrome C oxidase assembly factor 3"
                     /db_xref="GeneID:52469"
                     /db_xref="MGI:MGI:1098757"
     exon            1..235
                     /gene="Coa3"
                     /gene_synonym="1810033A19Rik; Ccdc56; D11Ertd99e; HSPC009"
                     /inference="alignment:Splign:2.1.0"
     CDS             22..348
                     /gene="Coa3"
                     /gene_synonym="1810033A19Rik; Ccdc56; D11Ertd99e; HSPC009"
                     /note="coiled-coil domain-containing protein 56;
                     coiled-coil domain containing 56; cytochrome c oxidase
                     assembly protein 3 homolog, mitochondrial"
                     /codon_start=1
                     /product="cytochrome c oxidase assembly factor 3 homolog,
                     mitochondrial"
                     /protein_id="NP_080894.1"
                     /db_xref="CCDS:CCDS25460.1"
                     /db_xref="GeneID:52469"
                     /db_xref="MGI:MGI:1098757"
                     /translation="MAAPGAGDPLNAKNGNAPFAQRIDPSREKLTPAQLQFMRQVQLA
                     QWQKTLPQRRTRNIMTGLGIGALVLAIYGYTFYSVAQERFLDELEDEAKAARARALER
                     ERASGP"
     exon            236..718
                     /gene="Coa3"
                     /gene_synonym="1810033A19Rik; Ccdc56; D11Ertd99e; HSPC009"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      718
                     /gene="Coa3"
                     /gene_synonym="1810033A19Rik; Ccdc56; D11Ertd99e; HSPC009"
                     /note="putative"
ORIGIN      
        1 ggcttagggc ggagcagcaa catggcggcc cctggagctg gtgaccctct gaatgctaag
       61 aatggaaatg ctccattcgc tcagcgcatc gacccgtcgc gggagaaatt gaccccagcg
      121 cagttgcagt ttatgcggca ggtgcaactt gcccagtggc agaaaacact gccacagcgg
      181 cggacccgga acatcatgac cggcctgggc atcggggccc tggtgttagc tatttatggt
      241 tacaccttct actcggtggc ccaagagcgt ttccttgatg agctggaaga tgaagccaaa
      301 gctgcccgag cccgtgctct tgagagagag cgagcttcgg gaccctaact gtatggacca
      361 tcttcaaact gctggatccc ctgtatatgt tgaatgatgc ctggtggtct tacagcatca
      421 ctggcacact aacgtcggac tgtgtgattg agcccaagaa gccagagact atgcatttgg
      481 ccgctgccaa gggggggatt gctcacttca cgtgcagttt gtccagttac tcagcccttt
      541 ttatttcctt gtttgagagg tatgcaacct tgcctttacc caaactttgt ggtttacccc
      601 ttcacctccc aggggccccg actcttaagg gggagggtgt ggcttaactg cagcgttgga
      661 accttaaagt gggaaagata gggtcaagtt aaagtaataa aatgagtcat gtctcccg
//
