LOCUS       XM_036152929            2657 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus CCR4-NOT transcription complex, subunit 3
            (Cnot3), transcript variant X16, mRNA.
ACCESSION   XM_036152929
VERSION     XM_036152929.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000073.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2657
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="7"
     gene            1..2657
                     /gene="Cnot3"
                     /gene_synonym="A930039N10Rik"
                     /note="CCR4-NOT transcription complex, subunit 3; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 ESTs, 539 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     13 samples with support for all annotated introns"
                     /db_xref="GeneID:232791"
                     /db_xref="MGI:MGI:2385261"
     CDS             116..2374
                     /gene="Cnot3"
                     /gene_synonym="A930039N10Rik"
                     /codon_start=1
                     /product="CCR4-NOT transcription complex subunit 3 isoform
                     X7"
                     /protein_id="XP_036008822.1"
                     /db_xref="GeneID:232791"
                     /db_xref="MGI:MGI:2385261"
                     /translation="MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKY
                     EADLKKEIKKLQRLRDQIKTWVASNEIKDKRQLIENRKLIETQMERFKVVERETKTKA
                     YSKEGLGLAQKVDPAQKEKEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDK
                     DQKQDRIEGLKRHIEKHRYHVRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDP
                     DFEENEFLYDDLDLEDIPQALVATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPA
                     NCTTENSEDDKKRGRSTDSEVSQSPAKNGSKPVHSNQHPQSPAVPPTYPSGPPPTTSA
                     LSSTPGNNGASTPAAPTSALGPKASPAPSHNSGTPAPYAQAVAPPNASGPSNAQPRPP
                     SAQPSGGSGGGSGGSSSNSNSGTGGGAGKQNGATSYSSVVADSPAEVTLSSSGGSSAS
                     SQALGPTSGPHNPAPSTSKESSTAAPSGAGNVASGSGNNSGGPSLLVPLPVNPPSSPT
                     PSFSEAKAAGTLLNGPPQFSTTPEIKAPEPLSSLKSMAERAAISSGIEDPVPTLHLTD
                     RDIILSSTSAPPTSSQPPLQLSEVNIPLSLGVCPLGPVSLTKEQLYQQAMEEAAWHHM
                     PHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVEFYQRLSTETLFFIFYYLEGTKA
                     QYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFT
                     FEYRYLEDRDLQ"
ORIGIN      
        1 ccctcctcgc ctgtcgcgat acgctccgca gcggcggcgc cagctcctgc ggtgagcgtc
       61 agcagcggcc attttcaaga gagtatgaag agagtgcgtc tgtagggcag ggaagatggc
      121 ggacaagcgc aaactccaag gtgagattga tcgctgcctc aagaaggtgt ccgaaggggt
      181 ggagcagttt gaagatattt ggcaaaagct ccacaatgca gccaacgcga accagaaaga
      241 aaagtatgag gctgacctaa agaaggagat taagaagcta caacggctga gggaccagat
      301 caagacatgg gtagcatcaa atgagatcaa ggacaaaagg cagcttattg aaaaccgcaa
      361 gctcattgag acgcaaatgg aacggttcaa agttgtggaa cgagagacca aaaccaaagc
      421 gtatagcaag gagggtctgg gtctggctca gaaggtggat cctgcccaga aggagaagga
      481 agaagttggc cagtggctca cgaacaccat tgacacctta aatatgcagg tggaccagtt
      541 tgagagtgaa gtggagtcac tgtcggtaca gacacgcaag aagaaaggcg acaaggatca
      601 gaagcaggac cggattgagg gcttgaagcg gcatatcgag aagcaccgct accatgttcg
      661 tatgctggag accatcctgc gaatgctgga caatgactcc atcctggttg atgccatccg
      721 caagatcaag gatgatgtgg agtactacgt tgactcatcc caggaccccg actttgaaga
      781 gaacgaattc ctctatgacg acctggacct cgaggacatt ccacaggcgc tggtcgccac
      841 ctcccccccc agccacagcc acatggagga cgagatcttc aaccagtcta gcagtacacc
      901 cacctcaaca acctccagct ctcccatccc acccagccca gcaaactgca ctacggaaaa
      961 ctctgaagat gataagaaga gaggccgatc tacagatagt gaagtcagcc agtctccagc
     1021 caaaaatggc tccaagcctg tccacagcaa ccagcacccc cagtccccag ctgtgccgcc
     1081 cacctacccc tctggccccc cacctaccac ttctgccttg agctccaccc ctggcaacaa
     1141 tggggcctct accccagcag cacctacaag tgccctgggc cctaaggcca gtccagctcc
     1201 cagccacaac tcgggtactc ctgcacccta tgcccaggct gtggccccac ctaatgccag
     1261 cgggcccagc aatgcccagc cacggccccc cagtgcccag ccaagcgggg gaagtggtgg
     1321 tggcagcgga gggagcagca gcaatagtaa cagtggcaca ggcggagggg ctggcaagca
     1381 gaacggtgcc acaagctata gttcggttgt ggcagacagc cctgcagagg tgaccctgag
     1441 tagcagtggg ggcagcagtg ccagcagcca agcccttggg cccacttcgg gccctcacaa
     1501 cccagctccc agcacctcaa aggaatccag tacggcagcc ccatcagggg ctgggaatgt
     1561 ggcttcaggc tcagggaata actcgggggg acccagcctc ttggtgccac tgcctgtaaa
     1621 tccccccagt tctccaacgc ccagcttcag tgaagccaag gcagctggta ccctgcttaa
     1681 tggtcctcca cagttcagca ccaccccaga aatcaaggcc cctgaaccac tcagctctct
     1741 gaaatccatg gcagaacggg cagctatcag ctctggtatt gaggaccctg tgccaacgtt
     1801 acacctaact gatcgagaca tcatcctgag cagcacatca gcaccaccca cctcatccca
     1861 gccacccctg cagctgtcag aggtgaacat accattgtca ctgggtgtct gtccactggg
     1921 gccagtttcc ctcaccaagg agcagctata ccaacaggcc atggaagagg ccgcctggca
     1981 ccacatgccc cacccctctg actccgagcg cattcggcag tacctccccc ggaacccttg
     2041 cccgacaccc ccctaccacc accagatgcc acccccacac tcggacactg tggagttcta
     2101 ccagcgcctg tcaactgaga cgctcttctt catcttctac tatctggagg gaaccaaggc
     2161 acagtacttg gcagccaagg ccctaaagaa gcagtcctgg cgattccaca ccaagtatat
     2221 gatgtggttc cagaggcacg aggagcctaa gaccatcaca gatgagtttg agcagggcac
     2281 ctacatctac tttgactacg agaagtgggg ccagcggaag aaggaaggct tcacctttga
     2341 gtaccgctac ctggaggacc gggacctcca gtgacaccgg cccccctcta ccctctccct
     2401 ccctcgcatg ctgatccccc tgcccaggtg agggccctgc cctggaagac tgggggaggc
     2461 ccaaggccat gggacaccct cccccccagg aagcagggaa gggataggga ggttttctct
     2521 tcctctctgc cctaccctgg gggcctgggg gcaagggctg ccccctcctc ccctccccag
     2581 tgagggacat tttttggtaa acctattttc attttggaaa atatttatga ataaatagtt
     2641 ttatatgacg gctggca
//
