LOCUS       XM_036152926            2972 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus CCR4-NOT transcription complex, subunit 3
            (Cnot3), transcript variant X12, mRNA.
ACCESSION   XM_036152926
VERSION     XM_036152926.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000073.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2972
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="7"
     gene            1..2972
                     /gene="Cnot3"
                     /gene_synonym="A930039N10Rik"
                     /note="CCR4-NOT transcription complex, subunit 3; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 16 ESTs, 539 long SRA reads, and 99% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 27 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:232791"
                     /db_xref="MGI:MGI:2385261"
     CDS             431..2689
                     /gene="Cnot3"
                     /gene_synonym="A930039N10Rik"
                     /codon_start=1
                     /product="CCR4-NOT transcription complex subunit 3 isoform
                     X7"
                     /protein_id="XP_036008819.1"
                     /db_xref="GeneID:232791"
                     /db_xref="MGI:MGI:2385261"
                     /translation="MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKY
                     EADLKKEIKKLQRLRDQIKTWVASNEIKDKRQLIENRKLIETQMERFKVVERETKTKA
                     YSKEGLGLAQKVDPAQKEKEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDK
                     DQKQDRIEGLKRHIEKHRYHVRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDP
                     DFEENEFLYDDLDLEDIPQALVATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPA
                     NCTTENSEDDKKRGRSTDSEVSQSPAKNGSKPVHSNQHPQSPAVPPTYPSGPPPTTSA
                     LSSTPGNNGASTPAAPTSALGPKASPAPSHNSGTPAPYAQAVAPPNASGPSNAQPRPP
                     SAQPSGGSGGGSGGSSSNSNSGTGGGAGKQNGATSYSSVVADSPAEVTLSSSGGSSAS
                     SQALGPTSGPHNPAPSTSKESSTAAPSGAGNVASGSGNNSGGPSLLVPLPVNPPSSPT
                     PSFSEAKAAGTLLNGPPQFSTTPEIKAPEPLSSLKSMAERAAISSGIEDPVPTLHLTD
                     RDIILSSTSAPPTSSQPPLQLSEVNIPLSLGVCPLGPVSLTKEQLYQQAMEEAAWHHM
                     PHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVEFYQRLSTETLFFIFYYLEGTKA
                     QYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFT
                     FEYRYLEDRDLQ"
ORIGIN      
        1 atcttggacc gggcccgttc agcttccgtg gagccgtcgg cagccgctgc cgggcctttc
       61 cttgatccct gaatccccta ctcggtcgtc tagaacaatc ccgggcccac ttcctctatc
      121 aacaacccaa ccctacttcc ggctttcgcg ccctcttatc gcgatagcgc ccgggctcgg
      181 ggcgcgagga aagaggaaaa aaaaaaaaaa aaaaggcggc gggcgggcgc tcgcctctct
      241 ctcccccctc ctcgcctgtc gcgatacgct ccgcagcggc ggcgccagct cctgcggtga
      301 gcgtcagggg gaagcctctt tggaagagat ggatcttgtg gaggaaaaag tccccaagac
      361 ccgagggtgc agttaacgtt cggccatttt caagagagta tgaagagagt gcgtctgtag
      421 ggcagggaag atggcggaca agcgcaaact ccaaggtgag attgatcgct gcctcaagaa
      481 ggtgtccgaa ggggtggagc agtttgaaga tatttggcaa aagctccaca atgcagccaa
      541 cgcgaaccag aaagaaaagt atgaggctga cctaaagaag gagattaaga agctacaacg
      601 gctgagggac cagatcaaga catgggtagc atcaaatgag atcaaggaca aaaggcagct
      661 tattgaaaac cgcaagctca ttgagacgca aatggaacgg ttcaaagttg tggaacgaga
      721 gaccaaaacc aaagcgtata gcaaggaggg tctgggtctg gctcagaagg tggatcctgc
      781 ccagaaggag aaggaagaag ttggccagtg gctcacgaac accattgaca ccttaaatat
      841 gcaggtggac cagtttgaga gtgaagtgga gtcactgtcg gtacagacac gcaagaagaa
      901 aggcgacaag gatcagaagc aggaccggat tgagggcttg aagcggcata tcgagaagca
      961 ccgctaccat gttcgtatgc tggagaccat cctgcgaatg ctggacaatg actccatcct
     1021 ggttgatgcc atccgcaaga tcaaggatga tgtggagtac tacgttgact catcccagga
     1081 ccccgacttt gaagagaacg aattcctcta tgacgacctg gacctcgagg acattccaca
     1141 ggcgctggtc gccacctccc cccccagcca cagccacatg gaggacgaga tcttcaacca
     1201 gtctagcagt acacccacct caacaacctc cagctctccc atcccaccca gcccagcaaa
     1261 ctgcactacg gaaaactctg aagatgataa gaagagaggc cgatctacag atagtgaagt
     1321 cagccagtct ccagccaaaa atggctccaa gcctgtccac agcaaccagc acccccagtc
     1381 cccagctgtg ccgcccacct acccctctgg ccccccacct accacttctg ccttgagctc
     1441 cacccctggc aacaatgggg cctctacccc agcagcacct acaagtgccc tgggccctaa
     1501 ggccagtcca gctcccagcc acaactcggg tactcctgca ccctatgccc aggctgtggc
     1561 cccacctaat gccagcgggc ccagcaatgc ccagccacgg ccccccagtg cccagccaag
     1621 cgggggaagt ggtggtggca gcggagggag cagcagcaat agtaacagtg gcacaggcgg
     1681 aggggctggc aagcagaacg gtgccacaag ctatagttcg gttgtggcag acagccctgc
     1741 agaggtgacc ctgagtagca gtgggggcag cagtgccagc agccaagccc ttgggcccac
     1801 ttcgggccct cacaacccag ctcccagcac ctcaaaggaa tccagtacgg cagccccatc
     1861 aggggctggg aatgtggctt caggctcagg gaataactcg gggggaccca gcctcttggt
     1921 gccactgcct gtaaatcccc ccagttctcc aacgcccagc ttcagtgaag ccaaggcagc
     1981 tggtaccctg cttaatggtc ctccacagtt cagcaccacc ccagaaatca aggcccctga
     2041 accactcagc tctctgaaat ccatggcaga acgggcagct atcagctctg gtattgagga
     2101 ccctgtgcca acgttacacc taactgatcg agacatcatc ctgagcagca catcagcacc
     2161 acccacctca tcccagccac ccctgcagct gtcagaggtg aacataccat tgtcactggg
     2221 tgtctgtcca ctggggccag tttccctcac caaggagcag ctataccaac aggccatgga
     2281 agaggccgcc tggcaccaca tgccccaccc ctctgactcc gagcgcattc ggcagtacct
     2341 cccccggaac ccttgcccga caccccccta ccaccaccag atgccacccc cacactcgga
     2401 cactgtggag ttctaccagc gcctgtcaac tgagacgctc ttcttcatct tctactatct
     2461 ggagggaacc aaggcacagt acttggcagc caaggcccta aagaagcagt cctggcgatt
     2521 ccacaccaag tatatgatgt ggttccagag gcacgaggag cctaagacca tcacagatga
     2581 gtttgagcag ggcacctaca tctactttga ctacgagaag tggggccagc ggaagaagga
     2641 aggcttcacc tttgagtacc gctacctgga ggaccgggac ctccagtgac accggccccc
     2701 ctctaccctc tccctccctc gcatgctgat ccccctgccc aggtgagggc cctgccctgg
     2761 aagactgggg gaggcccaag gccatgggac accctccccc ccaggaagca gggaagggat
     2821 agggaggttt tctcttcctc tctgccctac cctgggggcc tgggggcaag ggctgccccc
     2881 tcctcccctc cccagtgagg gacatttttt ggtaaaccta ttttcatttt ggaaaatatt
     2941 tatgaataaa tagttttata tgacggctgg ca
//
