LOCUS       XM_030242408            2969 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus CCR4-NOT transcription complex, subunit 3
            (Cnot3), transcript variant X19, mRNA.
ACCESSION   XM_030242408
VERSION     XM_030242408.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000073.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030242408.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2969
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="7"
     gene            1..2969
                     /gene="Cnot3"
                     /gene_synonym="A930039N10Rik"
                     /note="CCR4-NOT transcription complex, subunit 3; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 mRNAs, 16 ESTs, 620 long SRA reads, 7 Proteins, and
                     99% coverage of the annotated genomic feature by RNAseq
                     alignments, including 27 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:232791"
                     /db_xref="MGI:MGI:2385261"
     CDS             431..2686
                     /gene="Cnot3"
                     /gene_synonym="A930039N10Rik"
                     /codon_start=1
                     /product="CCR4-NOT transcription complex subunit 3 isoform
                     X8"
                     /protein_id="XP_030098268.1"
                     /db_xref="GeneID:232791"
                     /db_xref="MGI:MGI:2385261"
                     /translation="MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKY
                     EADLKKEIKKLQRLRDQIKTWVASNEIKDKRQLIENRKLIETQMERFKVVERETKTKA
                     YSKEGLGLAQKVDPAQKEKEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDK
                     DKQDRIEGLKRHIEKHRYHVRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPD
                     FEENEFLYDDLDLEDIPQALVATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPAN
                     CTTENSEDDKKRGRSTDSEVSQSPAKNGSKPVHSNQHPQSPAVPPTYPSGPPPTTSAL
                     SSTPGNNGASTPAAPTSALGPKASPAPSHNSGTPAPYAQAVAPPNASGPSNAQPRPPS
                     AQPSGGSGGGSGGSSSNSNSGTGGGAGKQNGATSYSSVVADSPAEVTLSSSGGSSASS
                     QALGPTSGPHNPAPSTSKESSTAAPSGAGNVASGSGNNSGGPSLLVPLPVNPPSSPTP
                     SFSEAKAAGTLLNGPPQFSTTPEIKAPEPLSSLKSMAERAAISSGIEDPVPTLHLTDR
                     DIILSSTSAPPTSSQPPLQLSEVNIPLSLGVCPLGPVSLTKEQLYQQAMEEAAWHHMP
                     HPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVEFYQRLSTETLFFIFYYLEGTKAQ
                     YLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTF
                     EYRYLEDRDLQ"
ORIGIN      
        1 atcttggacc gggcccgttc agcttccgtg gagccgtcgg cagccgctgc cgggcctttc
       61 cttgatccct gaatccccta ctcggtcgtc tagaacaatc ccgggcccac ttcctctatc
      121 aacaacccaa ccctacttcc ggctttcgcg ccctcttatc gcgatagcgc ccgggctcgg
      181 ggcgcgagga aagaggaaaa aaaaaaaaaa aaaaggcggc gggcgggcgc tcgcctctct
      241 ctcccccctc ctcgcctgtc gcgatacgct ccgcagcggc ggcgccagct cctgcggtga
      301 gcgtcagggg gaagcctctt tggaagagat ggatcttgtg gaggaaaaag tccccaagac
      361 ccgagggtgc agttaacgtt cggccatttt caagagagta tgaagagagt gcgtctgtag
      421 ggcagggaag atggcggaca agcgcaaact ccaaggtgag attgatcgct gcctcaagaa
      481 ggtgtccgaa ggggtggagc agtttgaaga tatttggcaa aagctccaca atgcagccaa
      541 cgcgaaccag aaagaaaagt atgaggctga cctaaagaag gagattaaga agctacaacg
      601 gctgagggac cagatcaaga catgggtagc atcaaatgag atcaaggaca aaaggcagct
      661 tattgaaaac cgcaagctca ttgagacgca aatggaacgg ttcaaagttg tggaacgaga
      721 gaccaaaacc aaagcgtata gcaaggaggg tctgggtctg gctcagaagg tggatcctgc
      781 ccagaaggag aaggaagaag ttggccagtg gctcacgaac accattgaca ccttaaatat
      841 gcaggtggac cagtttgaga gtgaagtgga gtcactgtcg gtacagacac gcaagaagaa
      901 aggcgacaag gataagcagg accggattga gggcttgaag cggcatatcg agaagcaccg
      961 ctaccatgtt cgtatgctgg agaccatcct gcgaatgctg gacaatgact ccatcctggt
     1021 tgatgccatc cgcaagatca aggatgatgt ggagtactac gttgactcat cccaggaccc
     1081 cgactttgaa gagaacgaat tcctctatga cgacctggac ctcgaggaca ttccacaggc
     1141 gctggtcgcc acctcccccc ccagccacag ccacatggag gacgagatct tcaaccagtc
     1201 tagcagtaca cccacctcaa caacctccag ctctcccatc ccacccagcc cagcaaactg
     1261 cactacggaa aactctgaag atgataagaa gagaggccga tctacagata gtgaagtcag
     1321 ccagtctcca gccaaaaatg gctccaagcc tgtccacagc aaccagcacc cccagtcccc
     1381 agctgtgccg cccacctacc cctctggccc cccacctacc acttctgcct tgagctccac
     1441 ccctggcaac aatggggcct ctaccccagc agcacctaca agtgccctgg gccctaaggc
     1501 cagtccagct cccagccaca actcgggtac tcctgcaccc tatgcccagg ctgtggcccc
     1561 acctaatgcc agcgggccca gcaatgccca gccacggccc cccagtgccc agccaagcgg
     1621 gggaagtggt ggtggcagcg gagggagcag cagcaatagt aacagtggca caggcggagg
     1681 ggctggcaag cagaacggtg ccacaagcta tagttcggtt gtggcagaca gccctgcaga
     1741 ggtgaccctg agtagcagtg ggggcagcag tgccagcagc caagcccttg ggcccacttc
     1801 gggccctcac aacccagctc ccagcacctc aaaggaatcc agtacggcag ccccatcagg
     1861 ggctgggaat gtggcttcag gctcagggaa taactcgggg ggacccagcc tcttggtgcc
     1921 actgcctgta aatcccccca gttctccaac gcccagcttc agtgaagcca aggcagctgg
     1981 taccctgctt aatggtcctc cacagttcag caccacccca gaaatcaagg cccctgaacc
     2041 actcagctct ctgaaatcca tggcagaacg ggcagctatc agctctggta ttgaggaccc
     2101 tgtgccaacg ttacacctaa ctgatcgaga catcatcctg agcagcacat cagcaccacc
     2161 cacctcatcc cagccacccc tgcagctgtc agaggtgaac ataccattgt cactgggtgt
     2221 ctgtccactg gggccagttt ccctcaccaa ggagcagcta taccaacagg ccatggaaga
     2281 ggccgcctgg caccacatgc cccacccctc tgactccgag cgcattcggc agtacctccc
     2341 ccggaaccct tgcccgacac ccccctacca ccaccagatg ccacccccac actcggacac
     2401 tgtggagttc taccagcgcc tgtcaactga gacgctcttc ttcatcttct actatctgga
     2461 gggaaccaag gcacagtact tggcagccaa ggccctaaag aagcagtcct ggcgattcca
     2521 caccaagtat atgatgtggt tccagaggca cgaggagcct aagaccatca cagatgagtt
     2581 tgagcagggc acctacatct actttgacta cgagaagtgg ggccagcgga agaaggaagg
     2641 cttcaccttt gagtaccgct acctggagga ccgggacctc cagtgacacc ggcccccctc
     2701 taccctctcc ctccctcgca tgctgatccc cctgcccagg tgagggccct gccctggaag
     2761 actgggggag gcccaaggcc atgggacacc ctccccccca ggaagcaggg aagggatagg
     2821 gaggttttct cttcctctct gccctaccct gggggcctgg gggcaagggc tgccccctcc
     2881 tcccctcccc agtgagggac attttttggt aaacctattt tcattttgga aaatatttat
     2941 gaataaatag ttttatatga cggctggca
//
