LOCUS       NM_027294               1064 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus CKLF-like MARVEL transmembrane domain containing 8
            (Cmtm8), mRNA.
ACCESSION   NM_027294
VERSION     NM_027294.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1064)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1064)
  AUTHORS   Metzakopian,E., Lin,W., Salmon-Divon,M., Dvinge,H., Andersson,E.,
            Ericson,J., Perlmann,T., Whitsett,J.A., Bertone,P. and Ang,S.L.
  TITLE     Genome-wide characterization of Foxa2 targets reveals upregulation
            of floor plate genes and repression of ventrolateral genes in
            midbrain dopaminergic progenitors
  JOURNAL   Development 139 (14), 2625-2634 (2012)
   PUBMED   22696295
REFERENCE   3  (bases 1 to 1064)
  AUTHORS   Tamplin,O.J., Kinzel,D., Cox,B.J., Bell,C.E., Rossant,J. and
            Lickert,H.
  TITLE     Microarray analysis of Foxa2 mutant mouse embryos reveals novel
            gene expression and inductive roles for the gastrula organizer and
            its derivatives
  JOURNAL   BMC Genomics 9, 511 (2008)
   PUBMED   18973680
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 1064)
  AUTHORS   Han,W., Ding,P., Xu,M., Wang,L., Rui,M., Shi,S., Liu,Y., Zheng,Y.,
            Chen,Y., Yang,T. and Ma,D.
  TITLE     Identification of eight genes encoding chemokine-like factor
            superfamily members 1-8 (CKLFSF1-8) by in silico cloning and
            experimental validation
  JOURNAL   Genomics 81 (6), 609-617 (2003)
   PUBMED   12782130
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK012262.1.
            
            On Apr 6, 2007 this sequence version replaced NM_027294.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK012262.1, CB204339.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849387, SAMN01164131
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1064              AK012262.1         2-1065
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 65.2 cM"
     gene            1..1064
                     /gene="Cmtm8"
                     /gene_synonym="2700018N07Rik; Cklfsf8"
                     /note="CKLF-like MARVEL transmembrane domain containing 8"
                     /db_xref="GeneID:70031"
                     /db_xref="MGI:MGI:2447167"
     exon            1..372
                     /gene="Cmtm8"
                     /gene_synonym="2700018N07Rik; Cklfsf8"
                     /inference="alignment:Splign:2.1.0"
     CDS             226..747
                     /gene="Cmtm8"
                     /gene_synonym="2700018N07Rik; Cklfsf8"
                     /note="chemokine-like factor super family 8;
                     chemokine-like factor superfamily member 8"
                     /codon_start=1
                     /product="CKLF-like MARVEL transmembrane domain-containing
                     protein 8"
                     /protein_id="NP_081570.1"
                     /db_xref="CCDS:CCDS23597.1"
                     /db_xref="GeneID:70031"
                     /db_xref="MGI:MGI:2447167"
                     /translation="MEEQQRARSHTVTTTTSSFAENFSTTSSSFAYDREFLRTPPGLL
                     IVAEIVLGLLVWTLIAGTEYFRVPAFGWVMFVAVFYWVLTVFFLIVYITLTYTRIPQV
                     PWTTVGLCFNGSAFVLYFSAAIVDASSVSPEKEGHNFNSWAASSFFAFLVTICYAGNT
                     YFSFIAWRSRTAQ"
     exon            373..546
                     /gene="Cmtm8"
                     /gene_synonym="2700018N07Rik; Cklfsf8"
                     /inference="alignment:Splign:2.1.0"
     exon            547..663
                     /gene="Cmtm8"
                     /gene_synonym="2700018N07Rik; Cklfsf8"
                     /inference="alignment:Splign:2.1.0"
     exon            664..1064
                     /gene="Cmtm8"
                     /gene_synonym="2700018N07Rik; Cklfsf8"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      1064
                     /gene="Cmtm8"
                     /gene_synonym="2700018N07Rik; Cklfsf8"
                     /note="putative"
ORIGIN      
        1 gcagtccact gccaccggtc gccagcgatc ccgttcccgg gtctccgagc agacccagag
       61 tgcgctcgcc gaggtgttgg gacacttgcg gacctgaccc tggagatcac ccgggtttgc
      121 ccgcctccca tcatccgcga ttccctggcc cgcgatcctg agcccaggga actcattggg
      181 tgggggtagg gtcctcgggg acccgggcca gctcccgggg cgacgatgga agagcagcag
      241 cgcgcgcgct cgcacacggt caccaccact accagctcct ttgcggagaa cttctccacc
      301 accagcagca gcttcgctta cgaccgagag ttcctccgta ccccgccggg gctcctgatc
      361 gtagccgaga tcgtcttggg actgctggtg tggactctca tcgctggcac tgagtatttt
      421 agagtccctg cttttggctg ggtaatgttt gtggctgtct tctactgggt cctcaccgtc
      481 ttcttcctca ttgtctacat caccctgact tacaccagga ttccccaggt gccctggacc
      541 acagtgggcc tgtgctttaa tggcagtgcc ttcgtcttgt acttctcagc tgccatagtg
      601 gacgcatctt ctgtctcccc agagaaggaa gggcacaact tcaacagctg ggcagcctcc
      661 tcgttctttg ccttcctggt caccatctgc tatgctggaa acacgtactt cagtttcata
      721 gcctggagat cgaggacggc acagtgactc tccctcctca gataacagag aagacgacac
      781 accagaacga atcccactgt tattaaaaga aagaaagaaa gaaagaaaga aagaaagaaa
      841 gaaaggaaga aagaaaaaca gttgtagcta taatgtatat tgccccagaa ttgtatttaa
      901 ctaatgtttt tatatcttag ttaaattagc tcccagtgtc ttgttacaat tgagctggat
      961 atttacttgg ggagtgctgc ggcttctaat gaaccctgaa gtctcctgat gtccttctag
     1021 cctttatttt tcttacacaa tgtataaata aattgctaaa tgtt
//
