LOCUS       NM_133733               4147 bp    mRNA    linear   ROD 01-AUG-2024
DEFINITION  Mus musculus CXADR-like membrane protein (Clmp), mRNA.
ACCESSION   NM_133733 XM_989553
VERSION     NM_133733.5
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4147)
  AUTHORS   Alderman,P.J., Saxon,D., Torrijos-Saiz,L.I., Sharief,M., Page,C.E.,
            Baroudi,J.K., Biagiotti,S.W., Butyrkin,V.A., Melamed,A., Kuo,C.T.,
            Vicini,S., Garcia-Verdugo,J.M., Herranz-Perez,V., Corbin,J.G. and
            Sorrells,S.F.
  TITLE     Delayed maturation and migration of excitatory neurons in the
            juvenile mouse paralaminar amygdala
  JOURNAL   Neuron 112 (4), 574-592 (2024)
   PUBMED   38086370
REFERENCE   2  (bases 1 to 4147)
  AUTHORS   Luissint,A.C., Fan,S., Nishio,H., Lerario,A.M., Miranda,J.,
            Hilgarth,R.S., Cook,J., Nusrat,A. and Parkos,C.A.
  TITLE     CXADR-Like Membrane Protein Regulates Colonic Epithelial Cell
            Proliferation and Prevents Tumor Growth
  JOURNAL   Gastroenterology 166 (1), 103-116 (2024)
   PUBMED   37716376
REFERENCE   3  (bases 1 to 4147)
  AUTHORS   Wu,Z., Zhang,X., An,Y., Ma,K., Xue,R., Ye,G., Du,J., Chen,Z.,
            Zhu,Z., Shi,G., Ding,X., Wan,M., Jiang,B., Zhang,P., Liu,J. and
            Bu,P.
  TITLE     CLMP is a tumor suppressor that determines all-trans retinoic acid
            response in colorectal cancer
  JOURNAL   Dev Cell 58 (23), 2684-2699 (2023)
   PUBMED   37944525
REFERENCE   4  (bases 1 to 4147)
  AUTHORS   Yoo,D., Park,J., Lee,C., Song,I., Lee,Y.H., Yun,T., Lee,H.,
            Heguy,A., Han,J.Y., Dasen,J.S., Kim,H. and Baek,M.
  TITLE     Little skate genome provides insights into genetic programs
            essential for limb-based locomotion
  JOURNAL   Elife 11, e78345 (2022)
   PUBMED   36288084
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 4147)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   6  (bases 1 to 4147)
  AUTHORS   Sze,K.L., Lee,W.M. and Lui,W.Y.
  TITLE     Expression of CLMP, a novel tight junction protein, is mediated via
            the interaction of GATA with the Kruppel family proteins, KLF4 and
            Sp1, in mouse TM4 Sertoli cells
  JOURNAL   J Cell Physiol 214 (2), 334-344 (2008)
   PUBMED   17620326
  REMARK    GeneRIF: Expression of CLMP, a novel tight junction protein, is
            mediated via the interaction of GATA with the Kruppel family
            proteins, KLF4 and Sp1, in mouse TM4 Sertoli cells.
REFERENCE   7  (bases 1 to 4147)
  AUTHORS   Kawabata,K., Tashiro,K., Sakurai,F., Osada,N., Kusuda,J.,
            Hayakawa,T., Yamanishi,K. and Mizuguchi,H.
  TITLE     Positive and negative regulation of adenovirus infection by
            CAR-like soluble protein, CLSP
  JOURNAL   Gene Ther 14 (16), 1199-1207 (2007)
   PUBMED   17538635
REFERENCE   8  (bases 1 to 4147)
  AUTHORS   Mulligan,M.K., Ponomarev,I., Hitzemann,R.J., Belknap,J.K.,
            Tabakoff,B., Harris,R.A., Crabbe,J.C., Blednov,Y.A., Grahame,N.J.,
            Phillips,T.J., Finn,D.A., Hoffman,P.L., Iyer,V.R., Koob,G.F. and
            Bergeson,S.E.
  TITLE     Toward understanding the genetics of alcohol drinking through
            transcriptome meta-analysis
  JOURNAL   Proc Natl Acad Sci U S A 103 (16), 6368-6373 (2006)
   PUBMED   16618939
REFERENCE   9  (bases 1 to 4147)
  AUTHORS   Eguchi,J., Wada,J., Hida,K., Zhang,H., Matsuoka,T., Baba,M.,
            Hashimoto,I., Shikata,K., Ogawa,N. and Makino,H.
  TITLE     Identification of adipocyte adhesion molecule (ACAM), a novel CTX
            gene family, implicated in adipocyte maturation and development of
            obesity
  JOURNAL   Biochem J 387 (Pt 2), 343-353 (2005)
   PUBMED   15563274
  REMARK    GeneRIF: We identified ACAM (adipocyte adhesion molecule), a novel
            homologue of the CTX (cortical thymocyte marker in Xenopus) gene
            family, which may be the critical adhesion molecule in adipocyte
            differentiation and development of obesity.
REFERENCE   10 (bases 1 to 4147)
  AUTHORS   Raschperger,E., Engstrom,U., Pettersson,R.F. and Fuxe,J.
  TITLE     CLMP, a novel member of the CTX family and a new component of
            epithelial tight junctions
  JOURNAL   J Biol Chem 279 (1), 796-804 (2004)
   PUBMED   14573622
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC140409.3 and AC158355.2.
            
            On Jun 20, 2018 this sequence version replaced NM_133733.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK028983.1, AK033723.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-341               AC140409.3         84331-84671         c
            342-499             AC140409.3         9632-9789           c
            500-701             AC158355.2         60527-60728
            702-869             AC158355.2         61783-61950
            870-992             AC158355.2         63785-63907
            993-1134            AC158355.2         70535-70676
            1135-4147           AC158355.2         71729-74741
FEATURES             Location/Qualifiers
     source          1..4147
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 21.42 cM"
     gene            1..4147
                     /gene="Clmp"
                     /gene_synonym="9030425E11Rik; ACAM; ASP5"
                     /note="CXADR-like membrane protein"
                     /db_xref="GeneID:71566"
                     /db_xref="MGI:MGI:1918816"
     exon            1..341
                     /gene="Clmp"
                     /gene_synonym="9030425E11Rik; ACAM; ASP5"
                     /inference="alignment:Splign:2.1.0"
     exon            342..499
                     /gene="Clmp"
                     /gene_synonym="9030425E11Rik; ACAM; ASP5"
                     /inference="alignment:Splign:2.1.0"
     exon            500..701
                     /gene="Clmp"
                     /gene_synonym="9030425E11Rik; ACAM; ASP5"
                     /inference="alignment:Splign:2.1.0"
     exon            702..869
                     /gene="Clmp"
                     /gene_synonym="9030425E11Rik; ACAM; ASP5"
                     /inference="alignment:Splign:2.1.0"
     exon            870..992
                     /gene="Clmp"
                     /gene_synonym="9030425E11Rik; ACAM; ASP5"
                     /inference="alignment:Splign:2.1.0"
     exon            993..1134
                     /gene="Clmp"
                     /gene_synonym="9030425E11Rik; ACAM; ASP5"
                     /inference="alignment:Splign:2.1.0"
     exon            1135..4147
                     /gene="Clmp"
                     /gene_synonym="9030425E11Rik; ACAM; ASP5"
                     /inference="alignment:Splign:2.1.0"
     regulatory      4124..4129
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Clmp"
                     /gene_synonym="9030425E11Rik; ACAM; ASP5"
                     /note="hexamer: AATAAA"
     polyA_site      4143
                     /gene="Clmp"
                     /gene_synonym="9030425E11Rik; ACAM; ASP5"
                     /note="major polyA site"
ORIGIN      
        1 agtcggtttt ctttccaaac agggaaaagt gttccacgaa gcggtagctc cttgccgcct
       61 cgccttctcc tccctaaccc tgggcccggc ccccgtcccg gcgcgagctg gtggagccag
      121 ggctagaagc cctcggtgcc cccggagcgc agcgcgcagg ggacccgggc gcggggccag
      181 cgcccgcaca tggctgcagc cccccgcgcg caccccgagg cgccgcgccc tgctcacaga
      241 aggtccgtcg gctgggctcg gtcgccctgc agccaggctg cgctgagccg ggaagtgccc
      301 gtgtccggag atcgggatgt ccctcttctt cctctggcta gtatcctatt atgttggaac
      361 gctgggaact cacactgaga tcaagagagt ggcagaggaa aaggttacct tgccctgtca
      421 ccatcaactg gggcttcccg agaaagacac cctggacatt gaatggctgc tcaccgataa
      481 tgaagggaac caaaaagtgg ttattacgta ttccagccgt catgtctaca ataacttgac
      541 cgaggagcag aagggccgag tggccttcgc ttccaacttc ctggcaggag atgcttccct
      601 gcagattgag cctctgaaac ccagtgatga aggcagatac acctgcaagg tgaagaattc
      661 aggacgctat gtctggagcc atgtcatctt gaaagtgcta gtgagaccat ccaagcccaa
      721 gtgtgagctg gaaggagagc cgaccgaagg aagtgacctg acgctgcagt gtgagtctgc
      781 ctctggaact aagcccattg tgtattattg gcagcgaatc cgggagaagg agggagaaga
      841 tgaacacctg ccacccaaat ccagaattga ttacaacaac cctggccgag tgctgctgca
      901 gaatctcacc atggcctcct ctgggcttta ccagtgcaca gcaggcaacg aggctggaaa
      961 ggagagctgt gtggtacggg tgactgtaca gtatgtgcag agcattggca tggtggcagg
     1021 agcagtgaca ggcatagtgg caggagccct gctcattttc ctcctgatat ggctgctaat
     1081 acgaaggaaa agcaaagaca gatacgagga agaagacaga cctaatgaaa tccgagaaga
     1141 cgccgaagcg ccccgagccc gccttgtgaa gcctagctcc tcttcctcag gctcccggag
     1201 ctcacgctct ggctcctcct ccacccgctc caccgggaac agtgcctcca gaagccagcg
     1261 gacgctgtcg agtgaagcag cgccgcagca gcccgggcta gccccgcagg catacagcct
     1321 cataggaccg gaagtgagag gttctgaacc aaagaaagtc caccatacga ccctgaccaa
     1381 agcagaaacc acactcagca caacgcccag ccagagcaaa gccttccaaa ctgtctgact
     1441 tagagtggac ttgacttgcg cttgccccaa agtcaggatc ttagcctagt cactggagct
     1501 cgtccaccag ccacgcaagc ccctcagcca gatacgatct cacttaagta gctgcagaaa
     1561 tggcacggac cagttctgat gagtaccctc cttatatagg ataccaaaca aacacaagga
     1621 cggaggctga ccatctatct ctaaaggcac ctcactgtgc cttcagacag agtggagggg
     1681 aggaggggcc caagcttatt tggtgaaaat aaagggaaag gtgaggctgc acacacctga
     1741 aacatcttac ctaggatgtt gcaagtcacc acagtcaaga agaagcggga atctcgtaga
     1801 tcaattttct attcatttct gcaaatttat tggattagtg tgattattca gatagtcaaa
     1861 acagaagccc acgccttata atatacctat ctgcaacatg tactgggaga actgcgttta
     1921 agaaattcac attaaaaaaa aaaaaaaaag aaggaaacac attttttttc tactttgact
     1981 tgacttcttg tgtcataagg tttgaacgtt ggttggggag gatttgcaat gtgggagaca
     2041 gagaaaaggg acttttctct tacctcatca acagccaatc ttcctatttc cgtcgaaccc
     2101 taaaataata actaaggagg gagtccaacc aagatgggac atgattctct gaagagcttt
     2161 cctttttgat attcagaggc ttgacaacag atatcaagac gattatcccg gggcagttgt
     2221 ggctctttat tccaatttga ctgactcccc taaagacttc tctgctggat gtttctagga
     2281 gaaacaaata ctcactacat gtcacttaat gaatgtcctt agggacagtc ctctagagaa
     2341 agtctctcag ggatgttgaa agatcccctt gcataccact tcctgctcct ctttctggga
     2401 acaagagcaa ccagaatttc aagactgctt ggaatagaga gggagagtag acctttctct
     2461 cagtaggtca aaggacattt gatactggcc caaaacttgg cgattctttc attctagaag
     2521 gatgcaaatg tgggactttt gatgattcta ggccttaaat tttcagcaat catttcctaa
     2581 aggcactgaa acccaaaccc ctcccatggc cctctccccg ctgagaggtt gaacggtatc
     2641 ctcgctgtct ttcttctcag cggtagactc caagagactt ggaaggagta aactgccatt
     2701 agggagtagg tggtgagcaa aacaaggggt ggtgggcggt gggagtgggt tcagctcaag
     2761 gctgttaaca tttttggcgt tggcgcttgg gaaggaatta gcagaaagga ttcactacca
     2821 gcaaaagtat caaacaactc acacaaggag aagaaaggtg tctgagaaat gtttaaaaaa
     2881 aaaaaaaaaa aaaaaggcag cctttccagg acaagtaact tgccttttag aaggttttga
     2941 agattagggc acttaaggca cagctgctaa acctgaatga gcccttcaaa gaacaaagca
     3001 aagtcagctg gtcgtggtgg gtggagcgga gcatttccta ttgttgacca gggcaaaggc
     3061 tagagaaaag cggaagtgct gtggctgctg agatgaagtg ttctctggag caggactcgg
     3121 atgcttccag gaaaaggttg aggctcacca ctgccctgtg tctctggctt cttattccta
     3181 cgtttaattg gcataagagc atcctcacag gatgtacaca catttccttc taaagtgcct
     3241 gggaaatgat gcttgcgtta agttgtttgg ggttcgtttg ggtgggcttt gtgcatgcta
     3301 aagtgaccgt cctaacctga gttttgtctt ccttttaaag aggtagaaat aagagacatt
     3361 gaggaaacaa cacaggtgcc tgtccatttg agagaaccgg catatttgaa tgcttcttat
     3421 actaactctt atctcattgt aagattttta ttttaagccc cttactctga ttacacttta
     3481 tccttcttgg aggatggtat ccaagcaaca tgtctctcct gctatataat tctgagcgtt
     3541 ctcattcctg gagtccctga gccatgcaag cttaccatga aggctgcagc tgcgctgtca
     3601 ggagcaattt tctcactgtt ccctgccttt gagcatcgga tttcctgcct gtgctttgca
     3661 agcagggatc agtccccttt gtctgaaaag gaaattccaa ttctttaaac gtgttgttag
     3721 aaaccaatac cactgaatat ccaaattact ttggaaactc tttccaatgg aaaactgcat
     3781 taaaacacgc caaacattat actgggagct gagaaattct gagagataag gcactgaagt
     3841 cttagtaacg acagagcctc agcatcagcc attcgcggtt aaataagaca gagaatgagc
     3901 tgaagatgga gcaaaagcca tgactggctc caaaccttat tccattgact ttgcaaacca
     3961 agccagctga gtctttaatg tgaaacaaat agaaaaggaa aaaacaaaaa caagcaaaca
     4021 aacaaaaaac tgatgggcaa aagcaaaaaa aaaaaaagta ataataaatg tttgtaagaa
     4081 aatgcaggag gaggaatgtg tatgtttaaa gaataaccgt ttcaataaaa tatataagcc
     4141 aaactga
//
