LOCUS       XM_036160164            3979 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus C-type lectin domain family 16, member A
            (Clec16a), transcript variant X7, mRNA.
ACCESSION   XM_036160164
VERSION     XM_036160164.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000082.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3979
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="16"
     gene            1..3979
                     /gene="Clec16a"
                     /gene_synonym="4932416N17Rik; curt; mKIAA0350"
                     /note="C-type lectin domain family 16, member A; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 28 ESTs, 226 long SRA reads, 1 Protein, and
                     99% coverage of the annotated genomic feature by RNAseq
                     alignments, including 35 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:74374"
                     /db_xref="MGI:MGI:1921624"
     CDS             255..3080
                     /gene="Clec16a"
                     /gene_synonym="4932416N17Rik; curt; mKIAA0350"
                     /codon_start=1
                     /product="protein CLEC16A isoform X7"
                     /protein_id="XP_036016057.1"
                     /db_xref="GeneID:74374"
                     /db_xref="MGI:MGI:1921624"
                     /translation="MFGRSRSWVGGGHSKSSRNIHSLDHLKYLYHVLTKNTTVTEQNR
                     NLLVETIRSITEILIWGDQNDSSVFDFFLEKNMFVFFLNILRQKSGRYVCVQLLQTLN
                     ILFENISHETSLYYLLSNNYVNSIIVHKFDFSDEEIMAYYISFLKTLSLKLNNHTVHF
                     FYNEHTNDFALYTEAIKFFNHPESMVRIAVRTITLNVYKVDNQAMLHYIRDKTAVPYF
                     SNLVWFIGSHVIELDNCVQTDEEHRNRGKLSDLVAEHLDHLHYLNDILIINCEFLNDV
                     LTDHLLNRLFLPLYVYSLENPDKGGERPKISLPVSLYLLSQVFLIIHHAPLVNSLAEV
                     ILNGDLSETYTKPAQDVPRSSAKPSIRCFIKPTETLERSLEMNKHKGKKRMQKRPNYK
                     NVGEEEDEERGSAEDAQEDAEKTKEIEMVIMKLGKLSEVAAAGTSVQEQNTTDEEKSA
                     ATNSENAQWSRPFLDMVYHALDSPDDDYHALFVLCLLYAMSHNKGMDPEKLKRIQLPV
                     PSEAEKTTYNHLLAERLIRIMNNAAQPDGRIRLATLELSCLLLKQQVLTSSGCVIKDV
                     HLACLEGAREESVHLVRHFYKGEEIFLDMFEDEYRSMTIKPMNVEYLMMDASILLPPT
                     GTPLTGIDFVKRLPCGDVEKTRRAIRVFFMLRSLSLQLRGEPETQLPLTREEDLIKTD
                     DVLDLNNSDLIACTVITKDGGMVQRFLAVDIYQMSLVEPDVSRLGWGVVKFAGLLQDM
                     QVTGVEDDSRALNITIHKPASSPHSKPFPILQATFVFSDHIRCIIAKQRLAKGRIQAR
                     RMKMQRIAALLDLPIQPTTEVLGFGLCSSSSSSQHLPFRFYEQCRRGSSDPTVQRSVF
                     ASVDKVPGFAVAQCINQHSSPSLSSPSPPFASGSPGGSGSTSHCDSGGSSSAPSATQS
                     PAVRSGRKGRRRVFSLSEADSHGGHWV"
ORIGIN      
        1 ctgtcgtcaa gagcctcgcc ggagaacttc atttcccaga tttcctcgcg gcggcggccg
       61 taaagcgcgg cggtcgaacg gccggttccg gctgaatgtc agtgcggggc tttgggctgg
      121 ggagcaaggt gcttggcagt ctctccaccg cccccgccgc cgctggctgg gcttgagatg
      181 tcgccgcgga caccgggccg ctgggcggct cggacatgaa accgtgaggc aggcgacagg
      241 gctggtctgc ggacatgttt ggacgctcac ggagctgggt gggcgggggc cacagcaagt
      301 cctcccgcaa catccactcc ttggaccacc tgaagtacct gtaccatgtt ttaacaaaaa
      361 acaccactgt cacagaacaa aatcggaacc tgctcgtgga gaccatccgt tccatcactg
      421 agatcctgat ttggggcgat caaaatgaca gctctgtgtt tgacttcttc ctggagaaga
      481 atatgtttgt tttcttcttg aacattctgc ggcagaaatc aggccgttat gtgtgtgtgc
      541 agctgctaca gaccttgaac attctctttg agaacatcag ccacgagaca tcgctctatt
      601 atttgctgtc taataactat gtaaactcga tcattgtcca taaatttgac ttttccgacg
      661 aggagatcat ggcgtattac atatcgttcc tgaaaacgct ttcattaaag ctcaacaacc
      721 acactgtcca tttcttttac aatgagcaca ccaatgactt tgccctgtac acagaagcca
      781 tcaagttctt caatcatccc gaaagcatgg ttcgaattgc cgtgagaacc atcactttga
      841 atgtctacaa agtggataac caggccatgc tgcactacat cagagacaaa accgctgtcc
      901 cgtacttctc caatttggtc tggttcattg ggagccatgt gatcgaactt gacaactgtg
      961 tgcagacaga tgaggagcac cggaatcggg ggaaactgag tgacctggtg gctgagcact
     1021 tggaccacct gcactatctc aacgacatcc tgatcatcaa ctgcgagttc ctcaatgacg
     1081 tactcaccga ccacctgctc aacaggcttt tcctgccgct ctacgtgtac tccctggaga
     1141 accccgacaa gggaggagaa cggccaaaaa tcagcctgcc tgtgtccctc tatcttctct
     1201 cccaggtctt cctcattata catcacgccc cgctggtgaa ctctctggct gaagtcattc
     1261 tgaatggtga tctatctgag acatacacaa agcctgcaca ggatgttccc agaagttctg
     1321 ccaagcccag catccggtgc ttcattaagc ccactgagac actcgagcgg tcccttgaga
     1381 tgaacaagca caagggcaag aagcggatgc aaaagagacc caactacaaa aacgttgggg
     1441 aggaggagga cgaggagaga gggtctgctg aagatgccca ggaagacgct gagaagacta
     1501 aagagattga gatggtgatc atgaagcttg gcaagctctc agaggtggcc gctgctggga
     1561 cctcagtgca ggagcagaac accacagacg aggagaagag cgccgccacg aactcagaga
     1621 atgcacagtg gagcagaccc ttcctggata tggtgtacca tgccctggac agccctgacg
     1681 atgactatca cgccctcttc gtgctctgcc tcctgtatgc catgtctcat aacaaaggca
     1741 tggatcctga aaaactaaaa cgaattcagc tcccagtgcc aagtgaagct gagaaaacca
     1801 cctacaacca tctgctggcc gagaggctca tcaggatcat gaacaatgct gctcagccag
     1861 atggcaggat ccggttggct acactggagc tgagctgcct gctcctgaag cagcaagtac
     1921 tgaccagctc tggctgtgtc atcaaggatg tgcacctggc ctgtttggag ggtgcaagag
     1981 aagagagtgt ccaccttgta cgtcatttct ataagggaga agagattttc ttggacatgt
     2041 ttgaagatga gtacaggagc atgacaataa agcccatgaa tgtggagtat ctcatgatgg
     2101 atgcttccat cctcctgccc ccaacgggca ctccactgac tggcattgac tttgtgaagc
     2161 ggctgccatg tggtgatgtg gagaagacga ggcgggccat ccgggtattc ttcatgctgc
     2221 gttccctgtc actgcagctg cgaggggaac ctgagaccca gttgccactg actcgggagg
     2281 aggacctgat caaaacagat gatgtcttgg atctgaataa cagtgacttg attgcatgca
     2341 cagtcatcac caaggatggt ggtatggtcc agcggttcct ggctgtggac atttaccaga
     2401 tgagcctggt ggagcctgac gtatccagac ttggctgggg agtggtcaag tttgctggcc
     2461 ttctacagga catgcaggtg acaggagtgg aggatgacag ccgtgccctg aacatcacca
     2521 ttcacaagcc tgcctccagc ccgcactcta agcccttccc tatcctgcag gccaccttcg
     2581 tgttctcgga tcatatccgc tgcattattg ccaagcagcg cctggccaag ggccgcatcc
     2641 aggccaggcg catgaagatg cagaggatag ccgcccttct ggacctccca atccagccga
     2701 caacagaagt cctgggattt ggactctgct cctcctcctc ctcctcccag cacctgcctt
     2761 tccgtttcta tgagcagtgc cgcagaggca gcagtgaccc gacagtgcaa cgctctgtgt
     2821 ttgcatccgt agacaaggtg ccaggctttg ctgtggccca gtgcataaac cagcatagct
     2881 ctccatccct gtcatcaccg tcgccaccat ttgccagtgg gagccctggt ggcagtggaa
     2941 gcaccagcca ctgtgactca ggaggctctt cctctgcacc ctcagcaacc cagagcccgg
     3001 cagtcaggag tggcaggaaa ggacgccggc gtgtgttcag cctgtcggag gccgacagtc
     3061 acggcggcca ctgggtttag tgcttcgacc aacagctgcc acggcaactc acgcacagtc
     3121 aaatcagatg cccccacgac tccagaacag cctcagcctc acctagacca gtcagtgatt
     3181 gggaatgaaa tggatgtcaa ctccaagccc agcaagaact catcggccag gagctctgag
     3241 ggggagacaa tgcacctgtc ccctagcctc cttcccgccc agcagcccac catctccttg
     3301 ctctacgagg acactgctga cacactgagt gtcgagtcac tgaccattgt ccccccggtc
     3361 gatccccaca gcctccgagc cctctctggc atctcccagc tccccacact gcctgcagca
     3421 gatacggaga ccccagctga gggtgctgta aacccagagc ctgcggaacc cacagagcac
     3481 tgagtgcgcc agagctctcc ctttgtgtgt gcggcccgct ggtagggacc ccccatgcat
     3541 tttgtgacag caagacacac tgggagcacc cacaattctc cgtggccctg aaaactgccc
     3601 ctcatacctc tccctacaag acaaccacca agcactcatt tgctctgacc tctcgctgag
     3661 caggctggga tcctagaaac ggcctcctgt gtagagacga tggcattggc cacctcagag
     3721 gggtctgggg ccctgcccct gatcctgaca gccgcagggg gcaggaccca ctggcaccgt
     3781 cctttgggca gctcctttgt cttccctccc agtgtgcaca gaagtggaca aggttactct
     3841 gggtagaaac ctgtggagaa gcaaacctag ataagcatct cctcgagcta gttatttctg
     3901 gttttggcaa caaatgaaga gatttatttt aaaagaatct attttggagg aggggcaaaa
     3961 agaaaaagcc ctcaaccat
//
