LOCUS       XM_006528431             849 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus claudin 34C3 (Cldn34c3), transcript variant
            X1, mRNA.
ACCESSION   XM_006528431
VERSION     XM_006528431.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000086.8) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006528431.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..849
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="X"
     gene            1..849
                     /gene="Cldn34c3"
                     /note="claudin 34C3; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 long SRA reads, 5
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 19 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:382265"
                     /db_xref="MGI:MGI:3645501"
     CDS             107..811
                     /gene="Cldn34c3"
                     /codon_start=1
                     /product="uncharacterized protein Cldn34c3 isoform X1"
                     /protein_id="XP_006528494.1"
                     /db_xref="GeneID:382265"
                     /db_xref="MGI:MGI:3645501"
                     /translation="MFISKRAARNRTLAGFHIFDASMVLLNKSANHQIRGFTLATIAC
                     IMCNTSMALPEWRNCYLNNSMLSYPSLAFVNIWEAYICHHNHNSSHLRDCHYYTCHNN
                     LVPLDIRVSQILLLVANVVGLVGTVCSVFALQQLNTEELHKNNDYNPFVLSAVLNAIA
                     STFIFLAVMCNHLSVPSKEEVSFLQSFQMPNFSNAQRAGRAMGLAYISAILFLLSAII
                     FISYCPSMEIKMFPRV"
ORIGIN      
        1 tactactcag ctactaaaaa caaggacatc ttgaaatttg cagtcagatg catggaacga
       61 gaaaaggtca tcctgagtga tgtaaaccag atccagaaat acaaacatgt ttatcagcaa
      121 gagagctgca agaaatagga cccttgctgg tttccacata tttgatgcca gcatggtcct
      181 gctaaacaag tctgccaatc accaaataag aggtttcact ttagctacaa tagcatgcat
      241 aatgtgcaat acctctatgg cccttccaga atggcgaaat tgctacttga acaactccat
      301 gctttcctac ccaagtctgg cttttgtgaa tatttgggag gcctacatct gccaccacaa
      361 ccacaactca agccacctga gagattgcca ttactacacc tgccataaca accttgttcc
      421 tttggatatc cgggtatctc aaattctgct cctggttgca aacgttgttg gtctggttgg
      481 gacagtttgt tctgtctttg ctctacagca gttaaacaca gaggaactgc ataagaataa
      541 tgactacaat ccatttgttc tttcagctgt cctcaatgct attgctagca cctttatttt
      601 tcttgctgtt atgtgtaatc acctctccgt gcccagcaag gaagaggtat ctttcctgca
      661 atctttccaa atgccaaatt tttccaatgc tcaaagagca ggcagagcca tgggattggc
      721 atacatatct gccatattgt ttttattaag tgctataatt tttatttctt actgtccttc
      781 aatggaaatc aaaatgtttc cccgtgtctg aaaataaatt tgcagcatac ataaccttga
      841 aaatcaaaa
//
