LOCUS       NM_001378274             857 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus claudin 34C2 (Cldn34c2), mRNA.
ACCESSION   NM_001378274 NM_001378243 XM_006528427
VERSION     NM_001378274.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 857)
  AUTHORS   Seker M, Fernandez-Rodriguez C, Martinez-Cruz LA and Muller D.
  TITLE     Mouse Models of Human Claudin-Associated Disorders: Benefits and
            Limitations
  JOURNAL   Int J Mol Sci 20 (21), 5504 (2019)
   PUBMED   31694170
  REMARK    Review article
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 857)
  AUTHORS   Baltzegar DA, Reading BJ, Brune ES and Borski RJ.
  TITLE     Phylogenetic revision of the claudin gene family
  JOURNAL   Mar Genomics 11, 17-26 (2013)
   PUBMED   23726886
REFERENCE   3  (bases 1 to 857)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   4  (bases 1 to 857)
  AUTHORS   Lal-Nag M and Morin PJ.
  TITLE     The claudins
  JOURNAL   Genome Biol 10 (8), 235 (2009)
   PUBMED   19706201
  REMARK    Review article
REFERENCE   5  (bases 1 to 857)
  AUTHORS   Van Itallie CM and Anderson JM.
  TITLE     Claudins and epithelial paracellular transport
  JOURNAL   Annu Rev Physiol 68, 403-429 (2006)
   PUBMED   16460278
  REMARK    Review article
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX649235.2.
            
            On Feb 6, 2020 this sequence version replaced NM_001378243.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN01164131,
                              SAMN01164132 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            RefSeq Select criteria           :: based on longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-117               BX649235.2         52121-52237
            118-158             BX649235.2         57535-57575
            159-857             BX649235.2         77309-78007
FEATURES             Location/Qualifiers
     source          1..857
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 49.81 cM"
     gene            1..857
                     /gene="Cldn34c2"
                     /gene_synonym="EG625591; Gm6604"
                     /note="claudin 34C2"
                     /db_xref="GeneID:625591"
                     /db_xref="MGI:MGI:3644765"
     exon            1..117
                     /gene="Cldn34c2"
                     /gene_synonym="EG625591; Gm6604"
                     /inference="alignment:Splign:2.1.0"
     exon            118..158
                     /gene="Cldn34c2"
                     /gene_synonym="EG625591; Gm6604"
                     /inference="alignment:Splign:2.1.0"
     exon            159..857
                     /gene="Cldn34c2"
                     /gene_synonym="EG625591; Gm6604"
                     /inference="alignment:Splign:2.1.0"
     CDS             181..819
                     /gene="Cldn34c2"
                     /gene_synonym="EG625591; Gm6604"
                     /codon_start=1
                     /product="claudin 34C2"
                     /protein_id="NP_001365203.1"
                     /db_xref="GeneID:625591"
                     /db_xref="MGI:MGI:3644765"
                     /translation="MVLLNKSANHQIRGFTLATIACIMCNTSMALPEWRICYLNNSML
                     SYPSLAFVNIWEAYICHHNHNSSHLRDCHYYTCHNNLVPLDIRVSQILLLVANVVGLV
                     GTVCSVFALQQLYTEELHKNNDYNPFVLSAVLNAIASTFIFLAVMCNHLSVPSKEEVS
                     FLQSFQMPIFSNAQRAGRAMGLAYISAILFLLSAIIFISYCPSMEIKMFPRV"
ORIGIN      
        1 gaatggaata ctactcagct actaaaaaca aggacatctt gaaatttgca gtcagatgca
       61 tggaacgaga aaaggtcatc ctgagtgatg taaaccagat ccagaaatac aaacatgttt
      121 atcagcaaga gagctgcaag aaataggacc cttgctggtt tccacatatt tgatgccagc
      181 atggtcctgc taaacaagtc tgccaatcac caaataagag gtttcacttt agctacaata
      241 gcatgcataa tgtgcaatac ctctatggcc cttccagaat ggcgaatttg ctacttgaac
      301 aactccatgc tttcctaccc aagtctggct tttgtgaata tttgggaggc ctacatctgc
      361 caccacaacc acaactcaag ccacctgaga gattgccatt actacacctg ccataacaac
      421 cttgttcctt tggatatccg ggtatctcaa attctgctcc tggttgcaaa tgttgttggt
      481 ctggttggga cagtttgttc tgtctttgct ctacagcagt tatacacaga ggaactgcat
      541 aagaataatg actacaatcc atttgttctt tcagctgtcc tcaatgctat tgctagcacc
      601 tttatttttc ttgctgttat gtgtaatcac ctctccgtgc ccagcaagga agaggtatct
      661 ttcctgcaat ctttccaaat gccaattttt tccaatgctc aaagagcagg cagagccatg
      721 ggattggcat acatatctgc catattgttt ttattaagtg ctataatttt tatttcttac
      781 tgtccttcaa tggaaatcaa aatgtttccc cgtgtctgaa aataaatttg cagcatacat
      841 aaccttgaaa atcaaaa
//
