LOCUS       NM_001097980            1081 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus claudin 34B1 (Cldn34b1), mRNA.
ACCESSION   NM_001097980 XM_001475498
VERSION     NM_001097980.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1081)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX005164.9.
            
            On Feb 7, 2008 this sequence version replaced XM_001475498.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN00849384
                              [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-137               BX005164.9         135984-136120       c
            138-1081            BX005164.9         132656-133599       c
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 72.38 cM"
     gene            1..1081
                     /gene="Cldn34b1"
                     /gene_synonym="EG546400; Gm16390"
                     /note="claudin 34B1"
                     /db_xref="GeneID:100040937"
                     /db_xref="MGI:MGI:3648403"
     exon            1..137
                     /gene="Cldn34b1"
                     /gene_synonym="EG546400; Gm16390"
                     /inference="alignment:Splign:2.1.0"
     exon            138..1081
                     /gene="Cldn34b1"
                     /gene_synonym="EG546400; Gm16390"
                     /inference="alignment:Splign:2.1.0"
     CDS             163..792
                     /gene="Cldn34b1"
                     /gene_synonym="EG546400; Gm16390"
                     /codon_start=1
                     /product="uncharacterized protein LOC100040937 precursor"
                     /protein_id="NP_001091449.1"
                     /db_xref="CCDS:CCDS53231.1"
                     /db_xref="GeneID:100040937"
                     /db_xref="MGI:MGI:3648403"
                     /translation="MPLKKCHGQMGGFALTTVAWLLCCISTGLPQWQVWHYEDPVVLK
                     PTVALVGMWRACVFHTDRNSSNTRVCYQYNYDGSIPLYIRGNQHLLLVSSFLGLFGKI
                     TTIIALSNVHMGRVRRNATCNPFRLSGILNIIASSFLYLAVLFNYIAIMSKWGIAFPP
                     SFNLPFQPDTRKMGSAMALAIIAAVLFQLSGTICLSSNLDIGKMPRSKM"
ORIGIN      
        1 agaggtggtg gtgaagctag caaggagtct caaagtccta gtgagaggac caatttcctt
       61 gtcgactcta ctgcctcgca taactgactg ccaagcaaca tcatctacta tcagttcact
      121 tgtgaattgt gtctctgttc tcaagtattc actgccgtca tcatgccgtt gaaaaagtgc
      181 catggccaaa tgggaggttt tgctttgacc actgtggcct ggctactttg ctgcatatcc
      241 acaggccttc ctcagtggca agtgtggcac tatgaagatc ctgtggtcct caagcctaca
      301 gtggctttag tgggcatgtg gagagcctgc gttttccaca ccgacagaaa ctccagcaac
      361 accagagtat gttaccaata caactacgat ggctccattc ctttgtatat tcggggaaac
      421 cagcacttgc tgctggtttc tagctttctt gggctttttg ggaaaatcac caccattatt
      481 gctctttcga atgtgcatat gggaagagta cggaggaatg ccacctgcaa tcctttcaga
      541 ctttcaggca tactgaacat cattgctagc agctttcttt accttgctgt tttgttcaat
      601 tacatagcca tcatgagcaa atgggggatt gccttcccac catctttcaa tttgcctttc
      661 cagccagaca ctcggaagat gggaagtgcc atggctttgg caattatagc tgcagtttta
      721 tttcaactaa gtggcacaat ttgcctttct tcaaatttag acataggcaa gatgccccga
      781 tccaaaatgt aaatcgctac cttacatagc cttgaaatgc cagcaaagat aatgagtatt
      841 cttcacatgt ctacacaaat tttcaaagaa cttgaaagga tgccaattgt ggcctgcggg
      901 gaaaaaataa tccagttgac tttctcttat cttttttttt tggcttcttt tgtgtttcct
      961 taatgcatta tttggattgt gggcttttat taaataaaat attattttat gggtagtatt
     1021 gatttatgtt ctacttgctg tcaacagtag caaataatca ataaacctga tccatattca
     1081 a
//
