LOCUS       XM_006523067            1154 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus claudin 14 (Cldn14), transcript variant X1,
            mRNA.
ACCESSION   XM_006523067
VERSION     XM_006523067.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000082.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006523067.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="16"
     gene            1..1154
                     /gene="Cldn14"
                     /note="claudin 14; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 mRNAs, 5 ESTs, 1 long
                     SRA read, 11 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 7 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:56173"
                     /db_xref="MGI:MGI:1860425"
     CDS             229..948
                     /gene="Cldn14"
                     /codon_start=1
                     /product="claudin-14 isoform X1"
                     /protein_id="XP_006523130.1"
                     /db_xref="GeneID:56173"
                     /db_xref="MGI:MGI:1860425"
                     /translation="MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAV
                     SYLKGLWMECVWHSTGIYQCQIYRSLLALPRDLQAARALMVISCLLSGMACACAVVGM
                     KCTRCAKGTPAKTTFAVLGGALFLLAGLLCMVAVSWTTNDVVQNFYNPLLPSGMKFEI
                     GQALYLGFISSSLSLIGGTLLCLSCQDEAPYRPYPPQSRAGATTTATAPAYRPPAAYK
                     DNRAPSVTSAAHSGYRLNDYV"
ORIGIN      
        1 gtaattgacc agacaactct ctctcaaaca cactggcctt agagcttcca ttcggcgaat
       61 gaggcaaagc cagaagactg tggtgtcctt gctgtgtctc cgtggtctac ctgagagcat
      121 caaggtggat gggactggag ctgttctgct tcctgcgggc acctaaggac cagatccatc
      181 cctggggacc tgggcactgc tcagcgcggc tagcaggggc ccttagccat ggccagcaca
      241 gcggtccagc tcctaggctt cctgcttagc ttcctgggca tggtaggaac gctcatcacc
      301 accatcctgc cacactggcg gaggacggcc catgtgggca ccaacatcct gactgccgta
      361 tcctacctga agggactgtg gatggaatgt gtgtggcaca gcacaggcat ctaccagtgt
      421 cagatctacc gctcactgct ggcgctgccc cgggacttgc aggccgcccg ggcgctcatg
      481 gtcatctcct gcctgttgtc gggcatggcc tgcgcctgcg cagtagtggg catgaagtgc
      541 acacgctgcg ccaaaggcac acccgccaag accacctttg cagtgctggg gggcgcgctc
      601 ttcctgctgg ccggcctgct gtgcatggtg gccgtgtcct ggaccacgaa tgacgtggtg
      661 cagaattttt ataacccgct gctgcccagt ggcatgaagt ttgaaatcgg ccaggccctg
      721 tacctgggct tcatctcctc atccctgtct ctcatcgggg gcaccctgct ctgcttatcc
      781 tgccaggacg aggcccccta cagaccctac ccgccccagt ccagggccgg agctaccacc
      841 acggctaccg cccctgccta ccgcccacca gcggcctaca aggacaaccg tgccccctcg
      901 gtgacctcag ccgcgcacag tgggtacagg ctgaatgact acgtgtgagt tccttccccg
      961 ggcttctgcc agggatgctg ggccccaaag gaccaatgat ggatgtggga aggatgcaga
     1021 gagcaagccc ggaacacagg gaaggaggtg ctcttcaaag caaagacttc taaaaagtgc
     1081 tggtttttta tttattatat gtatttatgc gggtggctta ataagagctc aataaagagt
     1141 gtcttggaag cgtg
//
