LOCUS       NM_001033199            2997 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus chloride channel accessory 4B (Clca4b), mRNA.
ACCESSION   NM_001033199 XM_619968 XM_897158 XM_917160 XM_924728
VERSION     NM_001033199.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2997)
  AUTHORS   Tang T, Li L, Tang J, Li Y, Lin WY, Martin F, Grant D, Solloway M,
            Parker L, Ye W, Forrest W, Ghilardi N, Oravecz T, Platt KA, Rice
            DS, Hansen GM, Abuin A, Eberhart DE, Godowski P, Holt KH, Peterson
            A, Zambrowicz BP and de Sauvage FJ.
  TITLE     A mouse knockout library for secreted and transmembrane proteins
  JOURNAL   Nat Biotechnol 28 (7), 749-755 (2010)
   PUBMED   20562862
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK136515.1.
            
            On Oct 2, 2009 this sequence version replaced NM_001033199.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK136515.1, BC139088.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849377, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2997              AK136515.1         6-3002
FEATURES             Location/Qualifiers
     source          1..2997
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 69.2 cM"
     gene            1..2997
                     /gene="Clca4b"
                     /gene_synonym="Clca7"
                     /note="chloride channel accessory 4B"
                     /db_xref="GeneID:99709"
                     /db_xref="MGI:MGI:2139790"
     exon            1..195
                     /gene="Clca4b"
                     /gene_synonym="Clca7"
                     /inference="alignment:Splign:2.1.0"
     CDS             31..2808
                     /gene="Clca4b"
                     /gene_synonym="Clca7"
                     /note="calcium activated chloride channel; chloride
                     channel calcium activated 7; chloride channel calcium
                     activated 4B"
                     /codon_start=1
                     /product="calcium-activated chloride channel regulator 4
                     precursor"
                     /protein_id="NP_001028371.1"
                     /db_xref="CCDS:CCDS38660.1"
                     /db_xref="GeneID:99709"
                     /db_xref="MGI:MGI:2139790"
                     /translation="MMAFSRGPVFLLFLLYLLWGSDTSLIKLNGNGYEDIIIAIDPAV
                     PEDTTIIEHIKGMVTKASTYLFEATEKRFFFKNVSILIPESWKNSSQYRRPKQESYKH
                     ADIKVAPPAFEGRDEPYTRQFTQCEEKAEYIHFTPDFVLGRKQVEYGDSGKLLVHEWA
                     HLRWGVFDEYNEDQPFYSASSKKIEATRCSTGITGMNRVHTCQGGSCITRRCRTNSTT
                     KLYEKDCQFFPDKVQSEKASIMFMQSIDSVTEFCKKENHNREAPTLHNEKCQWRSTWE
                     VISSSEDFNSSTPMETPPAPPFFSLLRISERIVCLVLDVSGSMSSSDRLNRMNQAAKY
                     FLSQIIENRSWVGMVHFSSQATIVHELIQMNSDIERNKLLQTLPTSAIGGTSICSGIK
                     TAFQVFKNGEYQTDGTEILLLSDGEDSTAKDCIDEVKDSGSIVHFIALGPSADLAVTN
                     MSILTGGNHKLATDEAQNNGLIDAFGALASENTDITQKSLQLESKGAILNNSLWLNDT
                     VVIDSTVGRDTFFLVTWSKQAPAIYLRDPKGTQTTNFTMDFVSKMAYLSIPGTAEVGV
                     WTYNLEAKENSEILTITVTSRAANSSVPPISVNAKVNTDTNTFPSPMIVYAEVLQGYT
                     PIIGARVTATIESNSGKTEELVLLDNGAGADAFKDDGVYSRFFTAYSVNGRYSLKVRA
                     DGGTNSARRSLRHPSSRAAYIPGWVVDGEIQGNPPRPEMTEATQPVLENFSRTASGGA
                     FVMSNVPIGPLPDQYPPNRITDLQATLDGEEISLTWTAPGDDYDVGRVQQYIIRTSEN
                     IIDLRDNFNNSLRVDTTKLTPKEANSKETFAFKPENISEENATYIFIAIESVDKNNLS
                     SGPSNIAQVAMFTPQAEPVPDESPRSSGVSISTIVLSVVGSVVLVCIIVSTTICILKN
                     KRSSSGAATTF"
     exon            196..336
                     /gene="Clca4b"
                     /gene_synonym="Clca7"
                     /inference="alignment:Splign:2.1.0"
     exon            337..484
                     /gene="Clca4b"
                     /gene_synonym="Clca7"
                     /inference="alignment:Splign:2.1.0"
     exon            485..593
                     /gene="Clca4b"
                     /gene_synonym="Clca7"
                     /inference="alignment:Splign:2.1.0"
     exon            594..771
                     /gene="Clca4b"
                     /gene_synonym="Clca7"
                     /inference="alignment:Splign:2.1.0"
     exon            772..990
                     /gene="Clca4b"
                     /gene_synonym="Clca7"
                     /inference="alignment:Splign:2.1.0"
     exon            991..1218
                     /gene="Clca4b"
                     /gene_synonym="Clca7"
                     /inference="alignment:Splign:2.1.0"
     exon            1219..1396
                     /gene="Clca4b"
                     /gene_synonym="Clca7"
                     /inference="alignment:Splign:2.1.0"
     exon            1397..1503
                     /gene="Clca4b"
                     /gene_synonym="Clca7"
                     /inference="alignment:Splign:2.1.0"
     exon            1504..1719
                     /gene="Clca4b"
                     /gene_synonym="Clca7"
                     /inference="alignment:Splign:2.1.0"
     exon            1720..1987
                     /gene="Clca4b"
                     /gene_synonym="Clca7"
                     /inference="alignment:Splign:2.1.0"
     exon            1988..2158
                     /gene="Clca4b"
                     /gene_synonym="Clca7"
                     /inference="alignment:Splign:2.1.0"
     exon            2159..2392
                     /gene="Clca4b"
                     /gene_synonym="Clca7"
                     /inference="alignment:Splign:2.1.0"
     exon            2393..2997
                     /gene="Clca4b"
                     /gene_synonym="Clca7"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aaagagaggc ctctgggtga ccaggctgga atgatggctt tctccagagg gcctgttttc
       61 ctcctcttcc tcttgtacct gctttggggg tcagacactt ccttgataaa gctgaatggg
      121 aatggttatg aagacatcat tattgccatt gatcctgctg tgccagaaga tacaacaata
      181 attgaacaca taaagggaat ggtgactaaa gcatctacat acctttttga agctacagaa
      241 aaaagatttt tcttcaaaaa tgtgtctata ttaattcctg agagttggaa aaacagttcc
      301 cagtacagaa ggccaaaaca ggagagttac aagcatgctg acattaaagt ggcacctccc
      361 gccttcgagg gcagagatga gccctacacc aggcagttca cacagtgtga agagaaagca
      421 gaatacattc acttcacccc tgactttgta ctggggagaa aacaagttga atatggagat
      481 tcaggaaaac tgttggtcca tgaatgggcc caccttcgct ggggagtatt tgatgagtac
      541 aacgaagacc agccattcta cagtgcttca tcaaagaaaa tcgaagcaac aaggtgctcc
      601 acaggtatca cgggtatgaa tagagtccat acatgccaag ggggcagctg tataaccaga
      661 aggtgcagaa ctaattccac cacaaagtta tatgaaaagg attgtcagtt cttcccagat
      721 aaagttcaat cagaaaaggc atccataatg ttcatgcaaa gtatcgattc tgtgactgag
      781 ttctgtaaaa aagaaaacca taatcgagag gctccaactc tacataatga aaagtgccaa
      841 tggagaagca cttgggaagt aatcagcagt tctgaggatt ttaacagcag cacgcccatg
      901 gagacaccac cggctccacc cttcttctcc ctgctgagga tcagtgagag aattgtgtgc
      961 ctagttcttg atgtgtcagg gagtatgagt tcttctgacc gtctgaatag aatgaaccaa
     1021 gcagcaaaat actttctaag ccagataatt gaaaataggt cctgggtagg gatggtgcac
     1081 tttagtagcc aggccactat tgtgcatgag ctgatccaaa tgaacagtga catcgagaga
     1141 aacaagctct tgcaaacttt acctacaagt gccattggag ggacgtccat ctgctctgga
     1201 atcaagactg catttcaggt atttaaaaat ggagaatacc aaacagatgg gactgagatc
     1261 ttgctgttga gtgatgggga ggacagcaca gccaaagact gtattgacga ggtgaaagac
     1321 agcgggtcca tagttcattt cattgccttg ggaccatcgg ctgacttagc tgtaacaaac
     1381 atgagcattt taacaggtgg aaaccataag cttgctacag atgaagccca gaacaatgga
     1441 ctcattgatg ctttcggggc cctggcttca gaaaatactg atatcaccca gaagtcactt
     1501 cagcttgaaa gtaagggtgc catactgaat aatagcctct ggctgaatga cactgttgta
     1561 attgacagca ccgtgggaag ggacacattc tttcttgtca cctggagcaa acaagcccct
     1621 gccatttatc tcagggatcc caaaggaaca caaaccacca atttcacaat ggactttgtt
     1681 tccaaaatgg cctatctcag tatcccagga acagctgagg tgggcgtttg gacttacaac
     1741 ctggaagcca aagaaaactc agagatacta acaattacag taacctctcg ggcagcaaat
     1801 tcttctgtgc caccaatctc tgtaaatgct aaggtaaaca cggacactaa cactttcccc
     1861 agcccaatga ttgtgtatgc tgaagttcta caagggtaca ctcctatcat tggagcccga
     1921 gtgacagcca ccatagaatc taacagtggg aagacagaag agctagtcct gctggacaac
     1981 ggtgcagggg ctgatgcttt caaggatgat ggggtctact ccaggttctt cacagcttat
     2041 tcagtgaatg gcaggtatag cttaaaagtc cgtgcagatg gaggaacaaa ctctgccagg
     2101 aggagtttac gccacccatc aagcagagct gcatacatac caggctgggt agtagatgga
     2161 gaaattcaag ggaacccacc cagacccgaa atgactgagg ctactcagcc agtcctagag
     2221 aatttcagca ggacagcatc tggaggtgcc tttgtgatgt ccaatgttcc aattggtcca
     2281 ttgcctgatc agtacccacc aaatcgaatc acagacctcc aggccacact cgatggggaa
     2341 gagatcagtc taacatggac ggccccagga gatgattatg atgttggaag agttcaacag
     2401 tatatcataa gaacaagcga aaatatcatt gatctcagag acaattttaa taattctctt
     2461 cgggttgata ctactaaact tacaccaaaa gaagccaact ccaaagaaac ctttgccttt
     2521 aaaccagaaa atatctcaga agaaaatgca acctacatat tcattgccat tgaaagtgtc
     2581 gacaaaaaca atttgagttc gggaccatcc aacatcgcac aagtggcaat gttcacccct
     2641 caggcagagc ctgtccctga tgaaagtcca cgttcatcag gagttagtat ttctactatt
     2701 gtgctgtctg tggtgggctc tgttgtacta gtttgtatta ttgtaagtac cactatttgt
     2761 atcttaaaga acaaaaggtc ctcatcagga gctgcaacaa cattttgaaa ggcaacatga
     2821 atcaaaagat atttctgagt ttttaaagca tattccatgt gatcatgaac tcaaatatca
     2881 tttcaagagg gtctaaaaga tactttaatc acacccattc catgagaaac taccaatatt
     2941 aatgatttat aattttattc atttatcata gtgatatata aatctggttt tatattg
//
