LOCUS       NM_145450               1915 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus clathrin binding box of aftiphilin containing 1
            (Clba1), mRNA.
ACCESSION   NM_145450 NM_181987
VERSION     NM_145450.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1915)
  AUTHORS   McClintock,T.S., Glasser,C.E., Bose,S.C. and Bergman,D.A.
  TITLE     Tissue expression patterns identify mouse cilia genes
  JOURNAL   Physiol Genomics 32 (2), 198-206 (2008)
   PUBMED   17971504
  REMARK    GeneRIF: BC022687 is most abundantly expressed in tissues rich in
            highly ciliated cells, such as olfactory sensory neurons, and is
            predicted to be important to cilia.
REFERENCE   2  (bases 1 to 1915)
  AUTHORS   Fuchs,S., Resch,K., Thiel,C., Ulbrich,M., Platzer,M., Jockusch,H.
            and Schmitt-John,T.
  TITLE     Comparative transcription map of the wobbler critical region on
            mouse chromosome 11 and the homologous region on human chromosome
            2p13-14
  JOURNAL   BMC Genet 3, 14 (2002)
   PUBMED   12174196
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK081297.1.
            
            On Apr 6, 2007 this sequence version replaced NM_145450.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK081297.1, BC022687.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1915              AK081297.1         2-1916
FEATURES             Location/Qualifiers
     source          1..1915
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="12"
                     /map="12 61.2 cM"
     gene            1..1915
                     /gene="Clba1"
                     /gene_synonym="C130001I08Rik; Flj20080"
                     /note="clathrin binding box of aftiphilin containing 1"
                     /db_xref="GeneID:217887"
                     /db_xref="MGI:MGI:2443738"
     exon            1..834
                     /gene="Clba1"
                     /gene_synonym="C130001I08Rik; Flj20080"
                     /inference="alignment:Splign:2.1.0"
     CDS             415..1380
                     /gene="Clba1"
                     /gene_synonym="C130001I08Rik; Flj20080"
                     /note="uncharacterized protein C14orf79 homolog;
                     clathrin-binding box of aftiphilin-containing protein 1"
                     /codon_start=1
                     /product="uncharacterized protein CLBA1"
                     /protein_id="NP_663425.2"
                     /db_xref="CCDS:CCDS49192.1"
                     /db_xref="GeneID:217887"
                     /db_xref="MGI:MGI:2443738"
                     /translation="MQGGQEVGRESVSDLAEEPGEGSPHQTARGQSGDGLERRRICCD
                     GPVVLPDTNANSSRLDEGLPTSCPHPGELSGGWGEFEGFRESSAKSEQFSQSFELLGR
                     ATECQPLRTPSVPEEGSSCQVQQGGPWVTGTAAGPSSESIPSYEKVFRLAFQEVAVEQ
                     APEDVCSLDHFLERSNEGAASVPRLCSESRKLWRALQNTDTASASRCLWGESHCRENL
                     LPVLGVDAAQKSPPGGQGHVLEGSDLRKPEELLAVSGFHLHHCKALIQTKLSGTSSSR
                     QGSLITYSLFLKTPLQGNGRYITIPQKKIFTPRNLKMAFFNNDVC"
     exon            835..971
                     /gene="Clba1"
                     /gene_synonym="C130001I08Rik; Flj20080"
                     /inference="alignment:Splign:2.1.0"
     exon            972..1101
                     /gene="Clba1"
                     /gene_synonym="C130001I08Rik; Flj20080"
                     /inference="alignment:Splign:2.1.0"
     exon            1102..1218
                     /gene="Clba1"
                     /gene_synonym="C130001I08Rik; Flj20080"
                     /inference="alignment:Splign:2.1.0"
     exon            1219..1915
                     /gene="Clba1"
                     /gene_synonym="C130001I08Rik; Flj20080"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      1915
                     /gene="Clba1"
                     /gene_synonym="C130001I08Rik; Flj20080"
                     /note="putative"
ORIGIN      
        1 atctccccgc cgggcgccgg gaggcgcgtc gcggcggcga aggtgggtgc gcgccttgcg
       61 ggcctctggg agctcgggac cccctccgtc tgcgcctggg acctggtccc ggagcccgcg
      121 agactcccgt ctgggacgcg atccccgagc tccctgccct cagcctccgg cctcgcagac
      181 cgggttctgc agctcatcca ccaggacttg cgtctgccca caggccctcc ttcgcctcac
      241 ttgtttggcc ctaggatacg cccccgtgcc ggactagtca tccgcgagtg ccaggagggg
      301 tcgactccac ggaggcacgt gaacactccc aggaagccct gggcaactcc agctcagccg
      361 ctgcatgttt tttgagcagc tttccttcgg gtcggctggc ctggctacac caagatgcaa
      421 ggcgggcagg aggtggggag agagtcagtg agtgacctcg cagaggagcc tggagagggg
      481 tccccccacc agacagctag aggacagagt ggtgatggtt tggaacggag gcggatctgc
      541 tgcgacggtc ccgtggttct gccggacacg aacgctaaca gctccaggct ggatgagggt
      601 cttcccacca gctgtccaca cccgggggag ctcagcggcg ggtggggaga gttcgaaggc
      661 ttccgggagt cttcagctaa gtcggagcag ttttctcagt cttttgaact cctggggaga
      721 gccacggaat gtcagccgct gagaacccct tcagtccccg aagagggcag ttcttgccag
      781 gtgcagcagg gtggaccctg ggtgacagga actgctgctg gcccatcttc agagtccatt
      841 cccagctatg agaaggtttt taggcttgcg tttcaagaag tcgccgtgga acaggctcct
      901 gaagacgttt gctccctgga ccatttcttg gaaagaagca atgaaggggc tgcatctgtg
      961 ccgagactct gttctgaatc taggaagctc tggagagccc tgcagaacac cgacactgcg
     1021 tctgcttcga ggtgtctctg gggcgaatct cactgtcggg aaaacctcct tcctgtgctt
     1081 ggtgtagacg ctgctcagaa gagcccccct ggaggccagg gtcatgtcct ggaaggttct
     1141 gacttgagaa aacctgaaga gctgctggct gtcagcggtt tccacctgca ccactgcaaa
     1201 gccctgattc agaccaagct ctcagggacg tccagtagca gacagggcag cctgattacc
     1261 tacagcctgt ttctgaagac accgctccaa gggaacgggc gctacatcac cattccacaa
     1321 aaaaagatct ttactccacg caacctgaaa atggcattct ttaataatga tgtctgctaa
     1381 aaacaggagt actttgtacc tttatgagat gttttacatt ttcttactgg cttgctttgg
     1441 tactagaact tgagaattct gtggcactgt ttcccagttc catgttagtt tcctaggacc
     1501 tctgtcaaac taccgtataa cacgtgctca ggtctgatag ggagcaccga tgataagggg
     1561 cagagccagt ctccatggag tttctgggga cactgtaggc tggtaccagg tacctgttga
     1621 cccctgcgtg gctcacagtt ggatccatga gttcagaagt cagaagatag ctgctgatca
     1681 cttgcaggaa catgacctgg ccctcccccg tgctgtttcc tggggtgtta tacctatctt
     1741 tctctgtgtt ggatcctcac ccagcagcct cggggacaag cttccctctg agtgggaggg
     1801 tgggaggaca cactgggtgt cccttggtca tctgctgaga caagggtttt actccagagg
     1861 catacacaag caggcagtgc tgcattttgt aaacttttat taaaaagaac tgtgt
//
