LOCUS       NM_183182               1970 bp    mRNA    linear   ROD 17-SEP-2023
DEFINITION  Mus musculus ciliary microtubule associated protein 2 (Cimap2),
            transcript variant 1, mRNA.
ACCESSION   NM_183182
VERSION     NM_183182.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL929585.11.
            
            [WARNING] On Nov 28, 2023 this sequence was replaced by
            NM_183182.4.
            
            On Jun 19, 2009 this sequence version replaced NM_183182.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: KP939367.1, SRR5189685.188851.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-114               AL929585.11        56617-56730         c
            115-202             AL929585.11        55394-55481         c
            203-367             AL929585.11        54831-54995         c
            368-490             AL929585.11        54527-54649         c
            491-625             AL929585.11        52860-52994         c
            626-769             AL929585.11        52601-52744         c
            770-931             AL929585.11        50905-51066         c
            932-1057            AL929585.11        49892-50017         c
            1058-1191           AL929585.11        46781-46914         c
            1192-1970           AL929585.11        30401-31179         c
FEATURES             Location/Qualifiers
     source          1..1970
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 49.67 cM"
     gene            1..1970
                     /gene="Cimap2"
                     /gene_synonym="Lexm"
                     /note="ciliary microtubule associated protein 2"
                     /db_xref="GeneID:242602"
                     /db_xref="MGI:MGI:2681853"
     exon            1..114
                     /gene="Cimap2"
                     /gene_synonym="Lexm"
                     /inference="alignment:Splign:2.1.0"
     CDS             20..1264
                     /gene="Cimap2"
                     /gene_synonym="Lexm"
                     /note="lymphocyte expansion molecule"
                     /codon_start=1
                     /product="ciliary microtubule-associated protein 2"
                     /protein_id="NP_899005.2"
                     /db_xref="CCDS:CCDS51252.1"
                     /db_xref="GeneID:242602"
                     /db_xref="MGI:MGI:2681853"
                     /translation="MRPRTHGAPPRNIMSTIPKWFKGAPFGVQSHRFDVSAVYPNQKK
                     FSTFTEAPYSRHHSVELSHIGPGTYNSKDTCFSKKFLEQKLGSGWSQAHEATRLTQLP
                     HFHYQAIKKEKEQQVHKRGPGSYNIKDFITELQKKPQSKRGLLSSGETRFRGFIGNYY
                     PGPGNYGEKGNPYTQLEEKAWNRSHSDGLMCRVSNKPPLFHQGSGLGPGTYTIKSDLE
                     TFVKKSTGNRGPYDIFSGERSSPLPYGHYSVQKMKPKELTDYKSFLDEMNSQHKKKQG
                     VFSKYPRDPKHPTERIFWTTLSQCPKNMDIAGPGSWLPHETEQKHVNRPPFLLASKRC
                     GLKAYQMILGTWNPVGVGRYLNTTLMESIDRRQRYRSLYMSEPKRYLQDLTRDRLMQK
                     RITPITKGKCRPTVDYNSDPTP"
     exon            115..202
                     /gene="Cimap2"
                     /gene_synonym="Lexm"
                     /inference="alignment:Splign:2.1.0"
     exon            203..367
                     /gene="Cimap2"
                     /gene_synonym="Lexm"
                     /inference="alignment:Splign:2.1.0"
     exon            368..490
                     /gene="Cimap2"
                     /gene_synonym="Lexm"
                     /inference="alignment:Splign:2.1.0"
     exon            491..625
                     /gene="Cimap2"
                     /gene_synonym="Lexm"
                     /inference="alignment:Splign:2.1.0"
     exon            626..769
                     /gene="Cimap2"
                     /gene_synonym="Lexm"
                     /inference="alignment:Splign:2.1.0"
     exon            770..931
                     /gene="Cimap2"
                     /gene_synonym="Lexm"
                     /inference="alignment:Splign:2.1.0"
     exon            932..1057
                     /gene="Cimap2"
                     /gene_synonym="Lexm"
                     /inference="alignment:Splign:2.1.0"
     exon            1058..1191
                     /gene="Cimap2"
                     /gene_synonym="Lexm"
                     /inference="alignment:Splign:2.1.0"
     exon            1192..1970
                     /gene="Cimap2"
                     /gene_synonym="Lexm"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggctggagt ctaggctcaa tgagacctcg cacccacggc gcccccccgc gcaacatcat
       61 gtccaccatc cccaagtggt tcaaaggggc gccctttggg gtgcagagcc acaggtttga
      121 tgtctccgct gtctatccca accagaagaa attcagcacc ttcacagagg ccccatactc
      181 cagacatcat tcggtggaac tgtcccacat aggacctggg acctataact ccaaggatac
      241 ctgcttcagc aagaagttcc tggaacagaa gttgggctca ggatggtccc aggcccacga
      301 agccactcgg ctgacccagc taccccactt ccactaccag gccatcaaga aggaaaaaga
      361 gcagcaggtg cacaagcgtg gccctggctc ctacaacatc aaagacttca taactgagct
      421 gcagaagaaa ccacagagca aacgggggct gctcagctct ggggagacac gtttccgagg
      481 ttttattggg aattattatc ctggccctgg aaattatggg gagaagggga acccgtacac
      541 acagctggag gagaaggcct ggaaccgctc acattctgac ggcctgatgt gtagagtgtc
      601 taacaagcca cccttgtttc atcagggcag tggcctggga cctggtacct acaccatcaa
      661 aagcgatctt gagacctttg tgaaaaagtc cactggtaat cgtggcccct atgacatttt
      721 ctctggtgaa cggagcagtc ctttgcccta tggacattac tctgtgcaga aaatgaagcc
      781 caaggaactg acagattaca agagctttct ggacgaaatg aactcacaac acaagaagaa
      841 acaaggggtt ttctcgaaat atccccgaga tccgaaacac cccacagaga gaattttctg
      901 gacaaccctt agtcagtgcc ccaaaaatat ggatatagct ggccctggtt cttggcttcc
      961 tcatgagacg gaacagaaac atgtcaaccg gccaccgttc ctcctggcct ccaaacggtg
     1021 cggcctaaag gcctaccaga tgattttggg aacctggaac ccagttggcg taggccgcta
     1081 tctcaacacc acgctgatgg agtccataga ccgaaggcag cgataccgtt ctctgtacat
     1141 gagtgagccc aagcgatacc tgcaagacct aacccgagac agactcatgc agaaacggat
     1201 tacacctatt acgaagggca agtgccgtcc aactgtggac tacaattcag atcctactcc
     1261 ttaaagccac tcgggaagaa cagcctgatg caaccagaga gcccaaggcc agaagagaaa
     1321 tcttgagatg ggaaaggaag cagggatctt ggagaatgcc tgggtgaggg gagaaggcag
     1381 gagggtcatc tttgctgtag ccctgcggtc aaaagtcaca gtgtctactg ggacagcagg
     1441 gggaccaggt atcttttgtt acaagagatc cattgtccta agcattccag tcagctggtg
     1501 acgtgaattt gggagccaga gagcaggtgg atggaagagg gggtcgtggg tgacttcctg
     1561 gaaccccttg cactgtgaag ctagagcgtg ggtacctaac tcaccgttgt cccagaatga
     1621 ggcggggaga ggagcatttg ttacgtagca gtctgggacc tgtaggaaaa ccccatctcc
     1681 atgctagggt gctctggaca ctcaacagag cctcgtgctg ggaggagact gctgacttcc
     1741 agtgttcagc cattgaagcg ctgtacccca ctttagcatt gtgggccacc agtgtggtta
     1801 gaggtgggtc ctcgggggtg agtgacaaca tcctgtgacg ttccccctca ctgtttacat
     1861 caatgacagt ggtgggggga gccagttgtc ccctggagaa gaggatgagg agacctgaca
     1921 gactcagcca cagaacttac ataataaagc gatttcagac atgttttcag
//
