LOCUS       NM_001033980            1190 bp    mRNA    linear   ROD 30-JUL-2024
DEFINITION  Mus musculus CBY1 interacting BAR domain containing 2 (Cibar2),
            mRNA.
ACCESSION   NM_001033980 XM_488153 XM_902521 XM_917402 XM_924926
VERSION     NM_001033980.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1190)
  AUTHORS   Stauber,M., Weidemann,M., Dittrich-Breiholz,O., Lobschat,K.,
            Alten,L., Mai,M., Beckers,A., Kracht,M. and Gossler,A.
  TITLE     Identification of FOXJ1 effectors during ciliogenesis in the foetal
            respiratory epithelium and embryonic left-right organiser of the
            mouse
  JOURNAL   Dev Biol 423 (2), 170-188 (2017)
   PUBMED   27914912
REFERENCE   2  (bases 1 to 1190)
  AUTHORS   Li,F.Q., Chen,X., Fisher,C., Siller,S.S., Zelikman,K., Kuriyama,R.
            and Takemaru,K.I.
  TITLE     BAR Domain-Containing FAM92 Proteins Interact with Chibby1 To
            Facilitate Ciliogenesis
  JOURNAL   Mol Cell Biol 36 (21), 2668-2680 (2016)
   PUBMED   27528616
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC163442.16 and BC147233.1.
            
            On Jan 13, 2010 this sequence version replaced NM_001033980.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK131790.1, BC147233.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164139 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-81                AC163442.16        34229-34309
            82-1141             BC147233.1         1-1060
            1142-1190           AC163442.16        45253-45301
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 69.09 cM"
     gene            1..1190
                     /gene="Cibar2"
                     /gene_synonym="1700120B06Rik; Fam92b"
                     /note="CBY1 interacting BAR domain containing 2"
                     /db_xref="GeneID:436062"
                     /db_xref="MGI:MGI:3588213"
     exon            1..156
                     /gene="Cibar2"
                     /gene_synonym="1700120B06Rik; Fam92b"
                     /inference="alignment:Splign:2.1.0"
     CDS             137..1015
                     /gene="Cibar2"
                     /gene_synonym="1700120B06Rik; Fam92b"
                     /note="protein FAM92B; family with sequence similarity 92,
                     member B"
                     /codon_start=1
                     /product="CBY1-interacting BAR domain-containing protein
                     2"
                     /protein_id="NP_001029152.2"
                     /db_xref="CCDS:CCDS22717.1"
                     /db_xref="GeneID:436062"
                     /db_xref="MGI:MGI:3588213"
                     /translation="MNVVLSRDSQVRAMENTVTNAERYFGQFCSLLASYTRKTARLRD
                     KADQLVKQLIDFANTENPELRATIRDFAEDLAKVQDYRQAEVERLEAKVISPLKLYGA
                     QIKQTRADIKKCKRVQNNEIKQLEKLEKLRQKSPSDRQMISQAETSAQRASVDTNRST
                     LHLVETVDAFQEQKLKDLRRIFSDFVTIEMVFHAKAVEVYSSAFQTLENYDLERDLQD
                     FRAKTRGIYGHGEARPLTDTNPAPSVPWPLASQSAQSTMARQGKEAGGEEDSETDSVE
                     EIPLEDLKGQQQGPRD"
     exon            157..391
                     /gene="Cibar2"
                     /gene_synonym="1700120B06Rik; Fam92b"
                     /inference="alignment:Splign:2.1.0"
     exon            392..460
                     /gene="Cibar2"
                     /gene_synonym="1700120B06Rik; Fam92b"
                     /inference="alignment:Splign:2.1.0"
     exon            461..562
                     /gene="Cibar2"
                     /gene_synonym="1700120B06Rik; Fam92b"
                     /inference="alignment:Splign:2.1.0"
     exon            563..568
                     /gene="Cibar2"
                     /gene_synonym="1700120B06Rik; Fam92b"
                     /inference="alignment:Splign:2.1.0"
     exon            569..673
                     /gene="Cibar2"
                     /gene_synonym="1700120B06Rik; Fam92b"
                     /inference="alignment:Splign:2.1.0"
     exon            674..787
                     /gene="Cibar2"
                     /gene_synonym="1700120B06Rik; Fam92b"
                     /inference="alignment:Splign:2.1.0"
     exon            788..889
                     /gene="Cibar2"
                     /gene_synonym="1700120B06Rik; Fam92b"
                     /inference="alignment:Splign:2.1.0"
     exon            890..1190
                     /gene="Cibar2"
                     /gene_synonym="1700120B06Rik; Fam92b"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1163..1168
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Cibar2"
                     /gene_synonym="1700120B06Rik; Fam92b"
                     /note="hexamer: AGTAAA"
     polyA_site      1190
                     /gene="Cibar2"
                     /gene_synonym="1700120B06Rik; Fam92b"
                     /note="major polyA site"
ORIGIN      
        1 agcagagtcc cttgagctta gccagaccac acagctgggc ccagtactag ctgccttctc
       61 tctgactagg ggacccctgg ggccctgtcc ttatcctccc caagatcctg gcagcaggtg
      121 cctctctctg tccacaatga acgtcgtcct ctccagggac agccaggtga gggccatgga
      181 gaacacggtg acaaatgctg agaggtattt cggtcagttc tgctcactgc tggcctccta
      241 cacacgcaag acggcccgac ttcgtgacaa ggctgaccag ctggtgaagc agctgataga
      301 ctttgccaac acggagaacc ctgagctgcg ggccaccatt cgagacttcg ccgaggacct
      361 tgccaaagtg caggattatc ggcaggcaga ggttgagagg ctggaggcca aggtcatcag
      421 ccccctgaag ctctacggtg cccaaataaa gcagacccgg gcagatatca agaaatgtaa
      481 acgtgtccaa aataacgaga ttaaacaact ggaaaagctg gagaaactga ggcagaagtc
      541 accctcagat cgacaaatga tctcccaggc ggagaccagt gcacagaggg cctcagtgga
      601 caccaaccgt tctaccctcc acctagtgga gaccgtggat gccttccagg aacagaaact
      661 gaaggacctc cggagaatct tctctgactt tgtgaccatc gagatggttt tccacgcaaa
      721 ggcggtggag gtgtattcca gcgctttcca gaccttggag aactatgacc tggagagaga
      781 cctgcaggac ttcagagcca agacgcgtgg aatttacggg catggtgaag ctcggccgct
      841 cacagacacc aaccccgctc catctgtccc ctggcctctg gccagccaga gtgctcagag
      901 taccatggca cgccagggga aggaggctgg aggtgaagag gacagtgaga ctgattccgt
      961 ggaggagatc cccctggagg acctcaaggg acaacagcaa ggaccccgag actaggaaga
     1021 ggatttcagt ggcaggagga aggcataggc tggcctggac cttggtgcat tctgcttgtg
     1081 ttctcagggt cagggattcc ctggggtctc gctttcttta ttggcacagt aggccgctct
     1141 accggcctat actccctgtg tcagtaaaag atacgtgaat ctcaactgca
//
