LOCUS       XM_006528381            4692 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus CHM Rab escort protein (Chm), transcript
            variant X1, mRNA.
ACCESSION   XM_006528381
VERSION     XM_006528381.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000086.8) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006528381.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4692
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="X"
     gene            1..4692
                     /gene="Chm"
                     /gene_synonym="Rep-1"
                     /note="CHM Rab escort protein; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     mRNAs, 6 ESTs, 918 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 17 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:12662"
                     /db_xref="MGI:MGI:892979"
     CDS             50..1840
                     /gene="Chm"
                     /gene_synonym="Rep-1"
                     /codon_start=1
                     /product="rab proteins geranylgeranyltransferase component
                     A 1 isoform X1"
                     /protein_id="XP_006528444.1"
                     /db_xref="GeneID:12662"
                     /db_xref="MGI:MGI:892979"
                     /translation="MADNLPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSQDLHK
                     DVEEAGALQKNPASVMSAQATEAAEAAEAAEAAEATEAAEAACLPTAEESLSTRSCEL
                     PAEQSQCTGPESSPQVNDAEVGEKETQSDAKSSTEQSSEILPKVQDNTETPKRNVITY
                     SQIIKEGRRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVP
                     CSRADVFNSKQLTMVEKRMLMKFLTFCVEYEDHPDEYKAYEETTFSEYLKTQKLTPNL
                     QYFVLHSIAMTSETTSSTVDGLKATKKFLQCLGRYGNTPFLFPLYGQGELPQCFCRMC
                     AVFGGIYCLRHSVQCLVVDKESRKCKAIVDQFGQRIISKHFVIEDSYLSENTCSGVQY
                     RQISRAVLITDGSVLKPDSDQQVSILTVPAEESGSFAVRVIELCSSTMTCMKGTYLVH
                     LTCMSSKTAREDLERVVQKLFTPYTEIEAENEQVEKPRILWALYFNMRDSSDISRDCY
                     NDLPSNVYVCSGPDCNLGNDNAVQQAETVFQKICPNEDFCPAPPNPEDIILDGDSSQQ
                     EVSESSVIPETNSETPKESTVLGDSEEPSE"
ORIGIN      
        1 agaaattcac atctacaaac tacagtcaca tgacacgttt cctgtcaaga tggcggataa
       61 tctcccttcg gactttgatg tgatcgtaat agggacgggt ctgcctgaat ccatcattgc
      121 agctgcatgt tcaaggagtg gccagagggt tctgcatgtt gattctcagg atttgcacaa
      181 agatgttgaa gaagctggtg cactgcagaa aaatcctgct tcagtgatgt ccgcacaggc
      241 cacagaggcc gcagaggctg cagaggccgc agaggctgca gaggccacag aggctgcaga
      301 ggccgcttgc cttcctactg cagaggagtc cttaagcacg aggagctgtg aactacctgc
      361 agaacaaagt cagtgcacgg ggccagagag ttcaccacaa gtaaatgatg ctgaagtagg
      421 agagaaagaa actcagagtg atgcaaaaag ttcaacagaa caatcaagtg aaattttgcc
      481 taaagtacaa gacaacacag agacaccaaa gagaaatgta attacttact cacagattat
      541 taaagaaggc cgaagattta acattgattt agtatcaaaa cttctctatt ctcggggatt
      601 actaattgat cttctaatca aatcaaatgt tagtcggtat gcagagttta aaaacattac
      661 gaggattctt gcatttcgag aaggaactgt ggaacaggtc ccctgttcca gagcagatgt
      721 cttcaatagc aaacaactta ctatggtaga aaagcgaatg cttatgaaat ttcttacatt
      781 ttgtgtggaa tatgaagacc atcccgatga gtacaaagca tacgaggaaa ctacattttc
      841 tgaatactta aaaactcaaa aattaacccc caacctacaa tattttgtcc tgcactcaat
      901 tgcaatgaca tcagagacaa caagcagtac tgtagatggt ctcaaagcta ctaaaaagtt
      961 tcttcagtgt cttgggcggt atggcaacac tccatttctg tttcctttat atggccaagg
     1021 agaacttcca cagtgttttt gcagaatgtg tgctgtgttt ggtggaatct attgtcttcg
     1081 ccattcagta cagtgccttg tagtggacaa agaatccaga aaatgtaaag caattgtaga
     1141 tcagtttggt caaaggataa tctctaaaca tttcgttatt gaagacagtt acctttctga
     1201 gaatacatgt tccggtgtac agtacaggca aatttccagg gcagtcctga ttacagatgg
     1261 atcagtacta aaacccgatt ctgatcaaca ggtctccatt ttgacagtgc cagcagaaga
     1321 gtcaggaagt tttgctgttc gagtcattga gttatgctct tcaacaatga catgcatgaa
     1381 aggcacatac ttggtacatt tgacttgcat gtcttctaaa acagcaagag aagatttaga
     1441 acgagtagtc cagaaattgt ttactccata tacagaaatc gaagcagaaa atgaacaggt
     1501 tgaaaagcca agaattctat gggcactcta cttcaatatg agagactctt cggatatcag
     1561 cagagattgt tataatgatt taccgtccaa tgtctatgtg tgctctggcc ctgactgtaa
     1621 tctaggaaat gataatgcag tccaacaggc ggaaacagtt ttccagaaaa tctgcccaaa
     1681 tgaagacttc tgtccagccc caccaaatcc tgaagatatt attcttgatg gagacagctc
     1741 acaacaagaa gtttcagaat ccagtgtcat accagaaacc aactcagaaa ctcccaagga
     1801 aagtacagtc ctaggagact cagaagagcc ctctgaatag tggatgtgca tcagacataa
     1861 cattctattt ggaaattcct gtcgccttca cagtcttctt gatagaagga atatttgaaa
     1921 tctttcaaaa agcaacaacc aatttattag gaaaaattag gagaaacagg ttccagaaat
     1981 ccaaaaagga attttttcaa caagggcatt tccagaaaca taaaacactt ataaagcaca
     2041 ttaacttacc tgttttaaca taccaaacct gtgagattag caggtgaaaa atatgaaagg
     2101 actgattccc agaaatgtag ttatgatggg aaaggggtcc tatgcttcgt taacaattat
     2161 gtggtgttca cagaaatttg ttcgccaatt gtgatctttt tgttgttgtt gttgttgaaa
     2221 gccacatctg gagagtcagc tcacatactt attttggtta tttgaattat attttcaatc
     2281 tgagcatgat ataacagata aaagcatgtg taaatacggt agaataaagc taaactatca
     2341 tgaactggcc aggagcctat atttggagta aaagttggtt ttatttccta tgttaaaagc
     2401 tgaatatgtt aatactaagg tgtttagaca ttttgctaat tttaatttct tagtaattag
     2461 tgatttgtat ataaatcaca tacacaattg gccaaacttc aaagattaag aaatagaaga
     2521 atacaagcaa acatttgata ggatgattct actgagtcaa cggaagcact aagtccttat
     2581 ccacagaact aatttcatca tagctgtgtt actcaaaata ttaggcaaat tgttaaactt
     2641 atcttcagtt tctccagata tgaagtgaaa catgcctcct ataacagagc agtcttgaag
     2701 atcaatgcag cactaacatt agaatggttc ttctggacat tgatctgtgg aaaaatatca
     2761 aaccaacctc atgatcacag tgttatattt attgcagtaa atttttaatg ccagtctgtt
     2821 tcctaaactc attaataaca ggtggaatgg tagttcttga agtcttagga atactttata
     2881 aattaacgtt cctcttctgg caacaaaacc atcaagacct gaacagagtg tagcaattaa
     2941 taacctgtaa tatacatttt acatgagaaa aatgagggct atccattgac agaaaaccta
     3001 tttgcaatgc ctacatttaa atgtctctaa gctctgatgg tctactttct tgagcaatag
     3061 tttagaccta gaactgccta taaataaata aacaataaat aaacgcaatg cttcctgtca
     3121 gggagccatg gctccaagga aaagcacaga attctccatg tgcagctgct tccctaacct
     3181 ggccaggttt cagcgatgtt aaagctccca gcacagattc ataagaaatg taaaaatcca
     3241 aggaatgtag ctcttgctga cccttgaaga aggagttgga ttgagaaaat gggaaaaatt
     3301 tcccagactt ccaggctgtt cctctcaggt tgcctgtacc tcccgctgta cagctctctc
     3361 ctctggggta tccaatcctt tttataatgt cacacaaatc agggacagaa tcactttata
     3421 acctactttg tcacaaagct tcagctctta tgtcagctgt tgtttcctga agcccaccta
     3481 gggcatgcac taaatgccaa gtacgctcct gtaatgcacc aggtactggc cctgcctctc
     3541 cataccagca atatgaaagt ttctcttgga tggggacgtt aagttggaat acaatcacag
     3601 ttatgtcaca ccagtaaaag tgttatactt tgttataatc ttagagttaa ggcctcctaa
     3661 atgtagaatg cacatttatc taaggagact attaagctag atagggttag aataattaga
     3721 agaactagac acctttggac actgcagctc tgtacattgt agaacaacac agaaactatt
     3781 ttttatttca tggcccagcg tacacaatat ctttttttca tccttttggt gcaatcagaa
     3841 aaaaaaaaaa aaaaactctc ttccaggtca tttactgagt atattattaa aatgcttaaa
     3901 gctcctgaat atgattaata atgactgaaa taccacaaaa ttgttttcaa aattgtagac
     3961 agacctattt cttgttgcct cagagtgtca tactaaacct ttgaagagca ttttcttttg
     4021 ttttcttaat tattgcttaa tacttggttt tactgtatta aggtcaaaac aataccaaca
     4081 acaaacctta aggttgtatt ataaaacctt acaacacaat gtttgctgtt ttacacaatg
     4141 caaacatttc agtaatttta aattttgaag ttgctggtat caaaattttt ttatttgttt
     4201 gttgaaagta tttaaatatg catgcctgtt tctggaaacg aaaaatggta tatcattaag
     4261 tgataagatc caataactaa tcctatgttg cttttgtata tttttctagt tggtgtgcct
     4321 gtctaagaaa gcatatataa taaatgtcag tttctatttt tatataataa aatggccatg
     4381 ggtaacttct agactagtgg acatttctaa cataatatct ataattataa tgttaattaa
     4441 taattattaa cttctggcaa gattgtttct agaattatct gccctagtat tgttatctag
     4501 ttcctaatag tagcaatcat ttaaaggaat ttaaaaaaac attttcttgc aaatacttat
     4561 gtgctactgg tattgaataa tttgtctttt gctcagtaaa agttcttacg tatttaaaaa
     4621 ggcatgagtc tataataatt tgcatactgt aacagggaat tttcagagaa aataaagact
     4681 tttcaatgct tt
//
