LOCUS       XM_030250728            3027 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus choline kinase alpha (Chka), transcript
            variant X12, mRNA.
ACCESSION   XM_030250728
VERSION     XM_030250728.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000085.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030250728.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3027
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="19"
     gene            1..3027
                     /gene="Chka"
                     /gene_synonym="Chetk-alpha; Chk; ChoK; CK; CK/EK-alpha;
                     EK; EtnK-alpha"
                     /note="choline kinase alpha; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     mRNAs, 43 ESTs, 795 long SRA reads, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 30 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:12660"
                     /db_xref="MGI:MGI:107760"
     CDS             1221..2066
                     /gene="Chka"
                     /gene_synonym="Chetk-alpha; Chk; ChoK; CK; CK/EK-alpha;
                     EK; EtnK-alpha"
                     /codon_start=1
                     /product="choline kinase alpha isoform X2"
                     /protein_id="XP_030106588.1"
                     /db_xref="GeneID:12660"
                     /db_xref="MGI:MGI:107760"
                     /translation="MVLESVMFAILAERSLGPKLFGIFPQGRLEQFIPSRRLDTEELR
                     LPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLNQVLRLKFSREARVQQLHKIL
                     SYNLPLELENLRSLLQYTRSPVVFCHNDCQEGNILLLEGQENSERRKLMLIDFEYSSY
                     NYRGFDIGNHFCEWMYDYTYEKYPFFRANIQKYPSRKQQLHFISSYLTTFQNDFESLS
                     SEEQFATKEDMLLEVNRFALASHFLWGLWSIVQAKISSIEFGYMEYAQARFEAYFDQK
                     RKLGV"
ORIGIN      
        1 cctttacagg accctcgcga cccctagaca aggccccgcc cccggtgcgc cgacccctcc
       61 ctcatcgtgg actcaccgcc tgagcctagg aggggctgtg ccgcagccaa tgggaaagcg
      121 gcgtggcgag ggtggcggcg gttgtgatgc gccaaagcgt ccaatcagcg gcgagcgcgg
      181 gggcgggcgg tgacgctggg ctctccgcgt gcagcgctgt aaaggagcga gcgccgcggc
      241 cccctatagc agtcgcctgc cgtcagcctc ccgcgctcgt ctctcgttac tgctgcctga
      301 cgtccattgc tgcctctccc cgccgtcgcc gacgtcgcct ccccgcgcgc tcccacaacc
      361 gccgcccggc cggtcagtga agccggcgag ccattccccg cgccggcccc cagaggcggg
      421 catccagccg gaccctgagt gtggccctct cgtgctgtgg ccgcccgcgc cttctcggcc
      481 gcttgtccag catgaaaacc aagttctgca ccgggggcga ggccgagccg tcgcctctcg
      541 ggctgctgct gagctgcggt ggcaacgctg ccccgacgcc cggcgtaggg cagcagcggg
      601 acgccgcagg cgagctggag tccaagcagc ttggtggccg aacccaacct ctcgcgctgc
      661 cgccgccgcc gccgccgccc ctgccgctgc ccccgccgcc atcaccgccg ctagcggacg
      721 aacaacccga gccccggacc aggcgcaggg cctacctgtg gtgtaaggaa ttcctgcccg
      781 gagcctggcg aggccttcgc gaggaccagt tccacatcag tgtcatcagg ggtggtctca
      841 gtaacatgct gttccagtgc tccctgccag actccatagc cagcgttggc gatgagcctc
      901 ggaaagtgct cttgcggctc tatggggcaa tcttaaagat ggcttgtcca tgcgatcgtg
      961 cctggagcac tctggtttcc aggtgacaga cacgattcac ggtgtttttg ataaagctgt
     1021 ggaatggcaa gaggtcctgt aataaagagg gatccgaaca agctcagaat gaaaatgaat
     1081 ttcaatttcc actgtaggag gcgccgagga gactgctccc agcctacagg ggagaggact
     1141 acagcagagg acaccttgag ggccttcgct tgagctcccc tgagagtctc tgcagtatcg
     1201 ggcttcaggg ggctgaggcg atggttctgg agagtgttat gtttgccatt cttgcagaga
     1261 ggtcacttgg gccaaaactc tttggcatct ttccccaagg ccgactggag cagtttatcc
     1321 cgagccggcg attggacact gaagagttac gtttaccaga tatttctgca gaaatagctg
     1381 agaaaatggc cacatttcat ggtatgaaaa tgccattcaa taaggaacca aaatggcttt
     1441 ttggaacaat ggaaaaatac ctgaatcaag tactaagact caaattcagc agggaggcca
     1501 gagttcagca actgcacaag atcctctctt acaacctgcc tcttgagctc gagaacctga
     1561 ggtcattgct gcagtatact agatctccag ttgtattttg tcataatgac tgtcaagaag
     1621 gtaatatctt attgttggaa ggccaggaga actctgaaag gcggaagctg atgcttattg
     1681 actttgagta cagcagttac aattacaggg gatttgacat tggaaatcat ttctgtgaat
     1741 ggatgtatga ttatacctat gagaagtatc ctttcttcag agcgaacatt cagaagtatc
     1801 cttcccgaaa acaacagctc cattttattt ccagttactt gactacattc caaaatgatt
     1861 ttgaaagcct cagtagtgaa gagcagtttg ctacaaaaga agacatgttg cttgaagtca
     1921 acagatttgc tcttgcctct catttcctct ggggactttg gtccattgta caggccaaga
     1981 tctcatccat tgaatttggg tacatggaat atgcccaagc cagattcgag gcctactttg
     2041 accagaagag gaagcttggg gtgtgaatgg ggtggctcca ttcttcacca ctggactgcg
     2101 ggaggcggct gcaccaggcc ctcagtggag cgctgctgtg accactgccc tgggcagaag
     2161 gcctggatgt ctcactactg agcaccgatg tgtatgatac tacagactat attaaagtgg
     2221 agtaacattt ctttcatctt tgtttacact ctcactagga ctctgaacca tgattggaag
     2281 cagaaatata gtacgatagt gcaatagctc agaacccgcc taaactgaag gccttttggc
     2341 tgcatggcta cagctttcag ccacttacgg ccccagctgg acagagcagt gctgtgtggg
     2401 tactccaagt gctgacttag gatattaatg tgctgcaaca catttgtcac caggctttga
     2461 aggtgacagc ctgacaatgt gttggagaca cttctgaagg gcaagtgaac agacatactg
     2521 tgaagtggct caacaggagg agcctgagtt gtggggtcta tggatggcaa ccagctgatt
     2581 ctgtacaggg tacacttgac tgtgggtatg caggtggcag ctgcagccct cctgtgcttg
     2641 tgtacgcatg actgcatgga ccagcaccac tgcctggcca taacttcagt gtctcctaac
     2701 tgggtgtgct ttatagctcc agcttcctgg gaggagcagt ggagccagct ccctcacccc
     2761 ttcttgcctt ccctctgcct ggcctggaac tcgggcttct gcccattgcc ctctgaagct
     2821 gcttcccatc tgatgtcact gggagacagc agctgtctgt ggggtattgg ggtgcaggta
     2881 gattagagct gtgaaatcca tgtacattaa tacccaatgg gataaactta gatttttttt
     2941 ttactctgaa ctctgaattg tttgtgcaca tatttctgct accaccaaga ctgtattata
     3001 cagataaata aacaacttga aacctgt
//
