LOCUS       NM_181391                710 bp    mRNA    linear   ROD 06-JUN-2024
DEFINITION  Mus musculus coiled-coil-helix-coiled-coil-helix domain containing
            7 (Chchd7), transcript variant 1, mRNA.
ACCESSION   NM_181391
VERSION     NM_181391.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 710)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK003308.1, AK007844.1 and AI851035.1.
            
            On Oct 23, 2013 this sequence version replaced NM_181391.3.
            
            Transcript Variant: This variant (1) encodes the supported protein.
            Variants 1 through 5 all encode the same protein.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC030366.1, AK007844.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849377
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-26                AK003308.1         2-27
            27-693              AK007844.1         2-668
            694-710             AI851035.1         1-17                c
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 2.2 cM"
     gene            1..710
                     /gene="Chchd7"
                     /gene_synonym="1810049H20Rik"
                     /note="coiled-coil-helix-coiled-coil-helix domain
                     containing 7"
                     /db_xref="GeneID:66433"
                     /db_xref="MGI:MGI:1913683"
     exon            1..244
                     /gene="Chchd7"
                     /gene_synonym="1810049H20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            245..392
                     /gene="Chchd7"
                     /gene_synonym="1810049H20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            393..458
                     /gene="Chchd7"
                     /gene_synonym="1810049H20Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             405..662
                     /gene="Chchd7"
                     /gene_synonym="1810049H20Rik"
                     /codon_start=1
                     /product="coiled-coil-helix-coiled-coil-helix
                     domain-containing protein 7"
                     /protein_id="NP_852056.1"
                     /db_xref="CCDS:CCDS38686.1"
                     /db_xref="GeneID:66433"
                     /db_xref="MGI:MGI:1913683"
                     /translation="MPMVTRRLRDPDINPCLSESDASTRCMDENNYDRERCSSYFLKY
                     KNCRRFWNSVMIQRRQNGVQPSMPTAAERDEILGAMQKMPY"
     exon            459..557
                     /gene="Chchd7"
                     /gene_synonym="1810049H20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            558..696
                     /gene="Chchd7"
                     /gene_synonym="1810049H20Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      671..676
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Chchd7"
                     /gene_synonym="1810049H20Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      696
                     /gene="Chchd7"
                     /gene_synonym="1810049H20Rik"
                     /note="major polyA site"
ORIGIN      
        1 aaggtcctgc tgcgtgagcc actgacgtgt ttggaactgc agccggcccg ggtgctggct
       61 gagtggtggc ctgtggtgag tggtctccgg cccctccctc cctggacagc aggcccggga
      121 cagcactgcg ccgagggcag accctagttc gtggcgccaa accctccgcg gcgcggcatg
      181 ctcctgccgc tactcacgcc acgcgattcg tccggccggg gcagcggaag gtgaccccat
      241 gcaggtttat ggtgtgctgt atttctgttt ccggatttaa cactcacaga ccagactctg
      301 agaagcctgg ggggcctgga cttgttcagt aacgtgccct tcccccactg cggatcaaag
      361 ctgcgaagag tgggaaatca ggaacttttt tgtaagaaga caagatgccc atggtcactc
      421 ggcggctgag agatcctgac ataaaccctt gcttgtcgga atctgatgct tctaccagat
      481 gcatggatga aaataactat gacagggaaa ggtgttccag ttacttcttg aagtacaaaa
      541 actgccggcg attctggaat tctgtcatga tccaaagaag acaaaatgga gttcagccat
      601 ctatgcctac agcagcagaa agagacgaaa ttttgggagc aatgcaaaag atgccctact
      661 gagtatttgc attaaaattg tttctataac ttgaaaaaaa aaaaaaaaaa
//
