LOCUS       NM_025366                619 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus coiled-coil-helix-coiled-coil-helix domain containing
            1 (Chchd1), mRNA.
ACCESSION   NM_025366
VERSION     NM_025366.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 619)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 619)
  AUTHORS   Greber,B.J. and Ban,N.
  TITLE     Structure and Function of the Mitochondrial Ribosome
  JOURNAL   Annu Rev Biochem 85, 103-132 (2016)
   PUBMED   27023846
  REMARK    Review article
REFERENCE   3  (bases 1 to 619)
  AUTHORS   Amunts,A., Brown,A., Toots,J., Scheres,S.H.W. and Ramakrishnan,V.
  TITLE     Ribosome. The structure of the human mitochondrial ribosome
  JOURNAL   Science 348 (6230), 95-98 (2015)
   PUBMED   25838379
REFERENCE   4  (bases 1 to 619)
  AUTHORS   Garcia-Frigola,C., Burgaya,F., Calbet,M., Lopez-Domenech,G., de
            Lecea,L. and Soriano,E.
  TITLE     A collection of cDNAs enriched in upper cortical layers of the
            embryonic mouse brain
  JOURNAL   Brain Res Mol Brain Res 122 (2), 133-150 (2004)
   PUBMED   15010206
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AV460497.1 and BC052720.1.
            
            On Oct 27, 2009 this sequence version replaced NM_025366.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC052720.1, CF740512.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-21                AV460497.1         1-21
            22-619              BC052720.1         1-598
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14 11.53 cM"
     gene            1..619
                     /gene="Chchd1"
                     /gene_synonym="1110001O19Rik; 2400010G13Rik; MRP-S37"
                     /note="coiled-coil-helix-coiled-coil-helix domain
                     containing 1"
                     /db_xref="GeneID:66121"
                     /db_xref="MGI:MGI:1913371"
     exon            1..171
                     /gene="Chchd1"
                     /gene_synonym="1110001O19Rik; 2400010G13Rik; MRP-S37"
                     /inference="alignment:Splign:2.1.0"
     CDS             48..404
                     /gene="Chchd1"
                     /gene_synonym="1110001O19Rik; 2400010G13Rik; MRP-S37"
                     /note="coiled-coil-helix-coiled-coil-helix
                     domain-containing protein 1; 28S ribosomal protein S37,
                     mitochondrial"
                     /codon_start=1
                     /product="small ribosomal subunit protein mS37"
                     /protein_id="NP_079642.1"
                     /db_xref="CCDS:CCDS26852.1"
                     /db_xref="GeneID:66121"
                     /db_xref="MGI:MGI:1913371"
                     /translation="MATPSLRGRLARFANPGKPILKPNKPLILANRVGNRRREKGEAT
                     CITEMSMMMACWKQNEFRDEACRKEIQDFFDCSSRAQEARKMRSIQESLGQSESLSPH
                     KMTKLLQRFPNKSHLI"
     exon            172..290
                     /gene="Chchd1"
                     /gene_synonym="1110001O19Rik; 2400010G13Rik; MRP-S37"
                     /inference="alignment:Splign:2.1.0"
     exon            291..595
                     /gene="Chchd1"
                     /gene_synonym="1110001O19Rik; 2400010G13Rik; MRP-S37"
                     /inference="alignment:Splign:2.1.0"
     regulatory      575..580
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Chchd1"
                     /gene_synonym="1110001O19Rik; 2400010G13Rik; MRP-S37"
                     /note="hexamer: AATAAA"
     polyA_site      595
                     /gene="Chchd1"
                     /gene_synonym="1110001O19Rik; 2400010G13Rik; MRP-S37"
                     /note="major polyA site"
ORIGIN      
        1 aggggtcacg cacggcgccg cggagcctac tgggaacgct gtgcaaaatg gcgacgccca
       61 gtctacgcgg ccgcctggcg cggtttgcga acccgggaaa acctatactg aaacccaaca
      121 agcctcttat cttagctaac cgcgtcggga accgacgtag agaaaaggga gaggcaacct
      181 gtatcacgga gatgtcgatg atgatggctt gctggaagca gaatgaattc cgcgacgagg
      241 cgtgcaggaa agagatccag gacttcttcg attgttcttc cagggctcag gaagccagga
      301 agatgagatc aatccaggag tctctgggac agtccgagag tttatctccc cacaagatga
      361 ccaagttgtt acagagattt cccaacaaat ctcatctcat ctgaaaatgg agaaatattt
      421 tcaatgaact ctcatttcca aaagctatac agagaggcac gtttgggagg tttgcggttt
      481 gcatttgcat tgctacgagt ttttgaaggg taaaatgagg caaaatactt aattttgctc
      541 ttttgaatga atcgtattct ggatgctgtc ttgaaataaa atcctctaaa aagaaaaaaa
      601 aaaaaaaaaa aaaaaaaaa
//
