LOCUS       NM_026188                868 bp    mRNA    linear   ROD 09-FEB-2025
DEFINITION  Mus musculus cilia and flagella associated protein 95 (Cfap95),
            mRNA.
ACCESSION   NM_026188
VERSION     NM_026188.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 868)
  AUTHORS   Tai,L., Yin,G., Huang,X., Sun,F. and Zhu,Y.
  TITLE     In-cell structural insight into the stability of sperm microtubule
            doublet
  JOURNAL   Cell Discov 9 (1), 116 (2023)
   PUBMED   37989994
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 868)
  AUTHORS   Chen,Z., Shiozaki,M., Haas,K.M., Skinner,W.M., Zhao,S., Guo,C.,
            Polacco,B.J., Yu,Z., Krogan,N.J., Lishko,P.V., Kaake,R.M.,
            Vale,R.D. and Agard,D.A.
  TITLE     De novo protein identification in mammalian sperm using in situ
            cryoelectron tomography and AlphaFold2 docking
  JOURNAL   Cell 186 (23), 5041-5053 (2023)
   PUBMED   37865089
REFERENCE   3  (bases 1 to 868)
  AUTHORS   Zhou,L., Liu,H., Liu,S., Yang,X., Dong,Y., Pan,Y., Xiao,Z.,
            Zheng,B., Sun,Y., Huang,P., Zhang,X., Hu,J., Sun,R., Feng,S.,
            Zhu,Y., Liu,M., Gui,M. and Wu,J.
  TITLE     Structures of sperm flagellar doublet microtubules expand the
            genetic spectrum of male infertility
  JOURNAL   Cell 186 (13), 2897-2910 (2023)
   PUBMED   37295417
REFERENCE   4  (bases 1 to 868)
  AUTHORS   Stauber,M., Weidemann,M., Dittrich-Breiholz,O., Lobschat,K.,
            Alten,L., Mai,M., Beckers,A., Kracht,M. and Gossler,A.
  TITLE     Identification of FOXJ1 effectors during ciliogenesis in the foetal
            respiratory epithelium and embryonic left-right organiser of the
            mouse
  JOURNAL   Dev Biol 423 (2), 170-188 (2017)
   PUBMED   27914912
REFERENCE   5  (bases 1 to 868)
  AUTHORS   McClintock,T.S., Glasser,C.E., Bose,S.C. and Bergman,D.A.
  TITLE     Tissue expression patterns identify mouse cilia genes
  JOURNAL   Physiol Genomics 32 (2), 198-206 (2008)
   PUBMED   17971504
  REMARK    GeneRIF: 1700028P14Rik is most abundantly expressed in tissues rich
            in highly ciliated cells, such as olfactory sensory neurons, and is
            predicted to be important to cilia.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK006473.1.
            
            On Apr 6, 2007 this sequence version replaced NM_026188.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK006473.1, AK014972.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-868               AK006473.1         4-871
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="19"
                     /map="19 18.44 cM"
     gene            1..868
                     /gene="Cfap95"
                     /gene_synonym="1700028P14Rik"
                     /note="cilia and flagella associated protein 95"
                     /db_xref="GeneID:67483"
                     /db_xref="MGI:MGI:1914733"
     exon            1..238
                     /gene="Cfap95"
                     /gene_synonym="1700028P14Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             87..773
                     /gene="Cfap95"
                     /gene_synonym="1700028P14Rik"
                     /note="uncharacterized protein C9orf135 homolog; protein
                     CFAP95"
                     /codon_start=1
                     /product="cilia- and flagella-associated protein 95"
                     /protein_id="NP_080464.1"
                     /db_xref="CCDS:CCDS29708.1"
                     /db_xref="GeneID:67483"
                     /db_xref="MGI:MGI:1914733"
                     /translation="MGTFDSQCHECFESKERWYEIGPTDLLERKGSLTLRSHHKKYSE
                     PVLVYSWHRNREAFPKDYDIESLETVKNLCMSTYKRFGSDSPRWMSEAREQMAQVLVN
                     KDLVEKKKTGLLDEETLCPGILERDPELPPTGFRDVPMESPPDPRKPCFSTTYSEDFT
                     PQYEYPPPACPRREEYSIVHRKCRSQFTDLNGSKRLGINTWHDESGIYANSEAKQKLY
                     ALARNPIVPF"
     exon            239..344
                     /gene="Cfap95"
                     /gene_synonym="1700028P14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            345..463
                     /gene="Cfap95"
                     /gene_synonym="1700028P14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            464..532
                     /gene="Cfap95"
                     /gene_synonym="1700028P14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            533..590
                     /gene="Cfap95"
                     /gene_synonym="1700028P14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            591..868
                     /gene="Cfap95"
                     /gene_synonym="1700028P14Rik"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      868
                     /gene="Cfap95"
                     /gene_synonym="1700028P14Rik"
                     /note="putative"
ORIGIN      
        1 gacgccgaat ctttgtccgt ataatgtaga gctggacggg cgctgaggga agtccagtct
       61 ggtctgttct caactgtagc gcaggcatgg ggacctttga tagccaatgt cacgagtgct
      121 tcgagagcaa agagcggtgg tatgagattg gacccacgga tttgctggag cgcaaaggct
      181 ctctaactct ccgctcacat cacaagaaat actcggagcc agtgttggtg tattcctggc
      241 accgtaacag agaagccttc cccaaagatt atgatataga gagtctggag acggtgaaaa
      301 acctatgtat gtcaacatac aagcgatttg gaagtgacag tccaaggtgg atgtcggaag
      361 cacgtgaaca gatggcccaa gttcttgtaa acaaagactt ggtggagaag aagaaaacgg
      421 gcttgctgga tgaggaaaca ctatgccccg ggattttgga aagggaccct gaattgcctc
      481 ccacaggctt tcgggatgtt cctatggaat ccccaccaga tccgagaaaa ccgtgttttt
      541 cgacaacgta ttctgaagat ttcactccac agtatgaata tccaccacct gcctgtcctc
      601 gccgagaaga gtactccata gtccacagga agtgccgttc tcaattcaca gacctcaatg
      661 gctccaaaag acttggcatc aacacatggc acgatgagag tggaatttat gctaattcag
      721 aggcaaaaca aaaactctac gcattggcta gaaatcctat tgtcccattt taaaaaagca
      781 atgtatacaa ccagaccctc atgctaatga aaaacgacaa atgtagtagt taataatttt
      841 cataataaaa acaaagcctt ccaaatct
//
