LOCUS       NM_001081025            2765 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus cilia and flagella associated protein 91 (Cfap91),
            mRNA.
ACCESSION   NM_001081025 XM_001002780
VERSION     NM_001081025.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2765)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 2765)
  AUTHORS   Liu,S., Zhang,J., Kherraf,Z.E., Sun,S., Zhang,X., Cazin,C.,
            Coutton,C., Zouari,R., Zhao,S., Hu,F., Fourati Ben Mustapha,S.,
            Arnoult,C., Ray,P.F. and Liu,M.
  TITLE     CFAP61 is required for sperm flagellum formation and male fertility
            in human and mouse
  JOURNAL   Development 148 (23) (2021)
   PUBMED   34792097
REFERENCE   3  (bases 1 to 2765)
  AUTHORS   Stauber,M., Weidemann,M., Dittrich-Breiholz,O., Lobschat,K.,
            Alten,L., Mai,M., Beckers,A., Kracht,M. and Gossler,A.
  TITLE     Identification of FOXJ1 effectors during ciliogenesis in the foetal
            respiratory epithelium and embryonic left-right organiser of the
            mouse
  JOURNAL   Dev Biol 423 (2), 170-188 (2017)
   PUBMED   27914912
REFERENCE   4  (bases 1 to 2765)
  AUTHORS   Yukitake,H., Furusawa,M., Taira,T., Iguchi-Ariga,S.M. and Ariga,H.
  TITLE     AAT-1, a novel testis-specific AMY-1-binding protein, forms a
            quaternary complex with AMY-1, A-kinase anchor protein 84, and a
            regulatory subunit of cAMP-dependent protein kinase and is
            phosphorylated by its kinase
  JOURNAL   J Biol Chem 277 (47), 45480-45492 (2002)
   PUBMED   12223483
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC154809.2.
            
            On Feb 6, 2007 this sequence version replaced XM_001002780.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK077038.1, SRR7345562.3109555.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849377 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-204               AC154809.2         76629-76832
            205-281             AC154809.2         82069-82145
            282-439             AC154809.2         82828-82985
            440-523             AC154809.2         84664-84747
            524-580             AC154809.2         85679-85735
            581-762             AC154809.2         86140-86321
            763-940             AC154809.2         90104-90281
            941-1098            AC154809.2         94195-94352
            1099-1281           AC154809.2         96936-97118
            1282-1424           AC154809.2         98098-98240
            1425-1541           AC154809.2         107381-107497
            1542-1613           AC154809.2         110336-110407
            1614-1760           AC154809.2         111627-111773
            1761-1982           AC154809.2         113489-113710
            1983-2131           AC154809.2         115724-115872
            2132-2223           AC154809.2         116430-116521
            2224-2765           AC154809.2         120194-120735
FEATURES             Location/Qualifiers
     source          1..2765
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 26.71 cM"
     gene            1..2765
                     /gene="Cfap91"
                     /gene_synonym="4932425I24Rik; Aat1; Maats1; Spata26"
                     /note="cilia and flagella associated protein 91"
                     /db_xref="GeneID:320214"
                     /db_xref="MGI:MGI:2443598"
     exon            1..204
                     /gene="Cfap91"
                     /gene_synonym="4932425I24Rik; Aat1; Maats1; Spata26"
                     /inference="alignment:Splign:2.1.0"
     CDS             84..2435
                     /gene="Cfap91"
                     /gene_synonym="4932425I24Rik; Aat1; Maats1; Spata26"
                     /note="AMY-1-associating protein expressed in testis 1
                     homolog; MYCBP-associated, testis expressed 1; AAT-1;
                     spermatogenesis associated 26; MYCBP/AMY-1-associated
                     testis-expressed protein 1; protein MAATS1"
                     /codon_start=1
                     /product="cilia- and flagella-associated protein 91"
                     /protein_id="NP_001074494.1"
                     /db_xref="CCDS:CCDS37341.1"
                     /db_xref="GeneID:320214"
                     /db_xref="MGI:MGI:2443598"
                     /translation="MSQTVTIQEPRPNDQRIPYQCREVRRAKGGFANRTYDYLYDPLF
                     IVSSERDHAQANIQATLIRSRLKKVPNFRSMFSNLFHHPRYSMYWSKTDPVPLHVTRE
                     WRGQEAKHKEVLRLQAAMDTSFQMPKEKDEDPDVSGKNRYKFFDRPFLPFLQQMPLNV
                     VLSPVKTQPLLLTPESSKYAIIPTKSTVATQTDYRDADVQTDPYSPEYVVCQDTIPEL
                     LTLANLTWGRGLPAGQAEVEIIERAREKRAWEATLPPLNDSVQAEKRRKMMNAMERKE
                     WAFREGEIEKLQELRLEVLKQLLKRREEDQNELNMRHLNDQWYKLQEAKEAKVAQIRH
                     KHVSDIRKLMGKGKNIEGKLQRRDIISDYSNFASQVYGPLSRLGRFPDNNSEDFVVRN
                     HYLNTYEGLVELESSLPDFVTQPRIKPPKPQIITTKAGFLKRTARMDYELAEVHKALV
                     DKKNKGLEGTKSLRFLQKNPISQARLPTPSLEMTSYEEGEIEMAVIYLQKLLRGRVVQ
                     NMMFEGKEKRLELILELRTSHALQEDDKLVKKAEKQVTLALQRQRNLHEDKLSVIENH
                     LGDLEGRVLADMFDFLSKELVRLQEERRIHAFAMLAERQRRMREAEESGRRQVEQKRL
                     QQEDMIFKEVIKVHQSTVTSYLEDIILNTEERTAEEQARKEIEKIAEEINNIAYEMEN
                     RRTYLQSEEIVAELVYSFLIPEVQKDFVKEKVRNAQRKHILAAHEIIHSNTETMLEEQ
                     VYKELQSEDFELEEEAESLDSEVPTVSVSKTSTIKPTQDEGEG"
     exon            205..281
                     /gene="Cfap91"
                     /gene_synonym="4932425I24Rik; Aat1; Maats1; Spata26"
                     /inference="alignment:Splign:2.1.0"
     exon            282..439
                     /gene="Cfap91"
                     /gene_synonym="4932425I24Rik; Aat1; Maats1; Spata26"
                     /inference="alignment:Splign:2.1.0"
     exon            440..523
                     /gene="Cfap91"
                     /gene_synonym="4932425I24Rik; Aat1; Maats1; Spata26"
                     /inference="alignment:Splign:2.1.0"
     exon            524..580
                     /gene="Cfap91"
                     /gene_synonym="4932425I24Rik; Aat1; Maats1; Spata26"
                     /inference="alignment:Splign:2.1.0"
     exon            581..762
                     /gene="Cfap91"
                     /gene_synonym="4932425I24Rik; Aat1; Maats1; Spata26"
                     /inference="alignment:Splign:2.1.0"
     exon            763..940
                     /gene="Cfap91"
                     /gene_synonym="4932425I24Rik; Aat1; Maats1; Spata26"
                     /inference="alignment:Splign:2.1.0"
     exon            941..1098
                     /gene="Cfap91"
                     /gene_synonym="4932425I24Rik; Aat1; Maats1; Spata26"
                     /inference="alignment:Splign:2.1.0"
     exon            1099..1281
                     /gene="Cfap91"
                     /gene_synonym="4932425I24Rik; Aat1; Maats1; Spata26"
                     /inference="alignment:Splign:2.1.0"
     exon            1282..1424
                     /gene="Cfap91"
                     /gene_synonym="4932425I24Rik; Aat1; Maats1; Spata26"
                     /inference="alignment:Splign:2.1.0"
     exon            1425..1541
                     /gene="Cfap91"
                     /gene_synonym="4932425I24Rik; Aat1; Maats1; Spata26"
                     /inference="alignment:Splign:2.1.0"
     exon            1542..1613
                     /gene="Cfap91"
                     /gene_synonym="4932425I24Rik; Aat1; Maats1; Spata26"
                     /inference="alignment:Splign:2.1.0"
     exon            1614..1760
                     /gene="Cfap91"
                     /gene_synonym="4932425I24Rik; Aat1; Maats1; Spata26"
                     /inference="alignment:Splign:2.1.0"
     exon            1761..1982
                     /gene="Cfap91"
                     /gene_synonym="4932425I24Rik; Aat1; Maats1; Spata26"
                     /inference="alignment:Splign:2.1.0"
     exon            1983..2131
                     /gene="Cfap91"
                     /gene_synonym="4932425I24Rik; Aat1; Maats1; Spata26"
                     /inference="alignment:Splign:2.1.0"
     exon            2132..2223
                     /gene="Cfap91"
                     /gene_synonym="4932425I24Rik; Aat1; Maats1; Spata26"
                     /inference="alignment:Splign:2.1.0"
     exon            2224..2765
                     /gene="Cfap91"
                     /gene_synonym="4932425I24Rik; Aat1; Maats1; Spata26"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2745..2750
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Cfap91"
                     /gene_synonym="4932425I24Rik; Aat1; Maats1; Spata26"
                     /note="hexamer: AATAAA"
     polyA_site      2765
                     /gene="Cfap91"
                     /gene_synonym="4932425I24Rik; Aat1; Maats1; Spata26"
                     /note="major polyA site"
ORIGIN      
        1 gcggttgcca tagctacggt gtacacagct accaagcctc ccatagctgt ttttctgctg
       61 gcgggaggga aaaaggcagc accatgagcc agacagtgac catccaggaa cccaggccca
      121 atgatcagag gattccgtat caatgcagag aggtgcggag ggccaagggc ggattcgcca
      181 atcgaacgta cgattacctg tacgacccgt tatttattgt gtcgagtgag cgagaccatg
      241 cacaggccaa tatccaagcc accctgattc gaagcagact gaaaaaagtt cccaactttc
      301 ggtccatgtt cagtaacctg tttcatcacc caagatactc tatgtactgg agcaagacag
      361 accctgtccc gttgcacgtc actcgagagt ggaggggaca agaagccaaa cacaaagaag
      421 tactccggct tcaagctgcg atggacactt ctttccagat gcccaaggaa aaggatgaag
      481 atccggatgt ttctggaaag aaccgctata agttctttga caggcccttc ctgccatttc
      541 ttcaacagat gcctttgaac gttgttttat caccagtcaa gacacaacca cttcttctta
      601 ctcccgagtc ttccaagtac gcaatcatcc ctaccaagtc cactgtggcc actcagactg
      661 attaccggga tgcagacgtt caaacagatc catactctcc agaatatgtc gtgtgtcaag
      721 acaccatccc tgagctcttg accctggcta atctgacttg gggccgaggt ctcccagcag
      781 gacaagctga ggtggaaata atagagcggg cccgggagaa gcgagcttgg gaagccactc
      841 tgcccccact gaatgacagt gtccaggctg agaagaggag gaagatgatg aacgccatgg
      901 agaggaagga gtgggccttc agagaaggag agattgagaa actgcaggaa ctgcgcctgg
      961 aggttttgaa acagttgctg aagaggcgtg aggaggacca gaatgagctg aacatgaggc
     1021 acctgaacga tcagtggtat aaactgcagg aagccaagga ggccaaagtg gcgcagatcc
     1081 gtcacaagca tgtatcagac atcagaaaac tcatgggaaa ggggaagaac atagaaggga
     1141 agctgcagcg gagagacatc atctcggact actctaactt tgcatctcag gtctatggac
     1201 ctctgtctcg ccttggccgt ttcccagaca acaactcaga ggactttgta gtcagaaacc
     1261 actatctcaa cacctatgaa ggattagtgg aacttgaatc atccctcccc gattttgtga
     1321 cacagccaag gatcaaacct ccaaagcccc aaatcattac caccaaggcc ggctttctga
     1381 agaggacagc caggatggac tatgagttgg cagaagttca caaggcacta gtggataaga
     1441 agaataaagg tctagaagga acgaaatctc tgcgattcct gcaaaaaaat cccatctctc
     1501 aggctcggct tccaaccccc tccttggaaa tgacttccta tgaagaagga gaaatagaaa
     1561 tggctgtgat ctacttgcag aagctactcc ggggcagagt cgtgcagaac atgatgtttg
     1621 agggcaagga gaagcggctg gagttgatcc tggagttgcg caccagccat gccctgcaag
     1681 aggatgacaa gctagtgaag aaagcagaga agcaagtgac cctggctctg cagcggcaaa
     1741 ggaacctgca tgaggacaag ttgtcagtga ttgaaaacca cttgggtgac ctggaaggaa
     1801 gagtgctggc ggatatgttc gacttcctgt ccaaagagct ggtgaggttg caggaggaga
     1861 ggaggatcca cgccttcgcc atgctggctg agcgccaacg gcgcatgcgg gaggcagaag
     1921 agagcggtcg gcgccaggtg gagcaaaagc gcctgcagca agaggacatg atattcaagg
     1981 aggtgattaa agttcaccaa agtacggtaa cctcctacct ggaagacatc atactgaaca
     2041 ccgaggagag aactgcagag gaacaagcca gaaaagaaat cgagaagatc gctgaggaga
     2101 tcaacaacat cgcttatgaa atggagaacc gccgaaccta ccttcagtca gaggagattg
     2161 ttgcagagct ggtttacagt tttctcatcc cagaggtaca aaaagacttt gtcaaagaga
     2221 aagtgaggaa tgcgcagcgg aagcacatcc tggcagccca tgagatcatt cacagcaaca
     2281 ccgaaacgat gctggaggag caagtctata aggaactgca gtcagaggac tttgagctag
     2341 aggaggaggc tgagagccta gactctgagg tgccaactgt ctcagtctct aaaacatcaa
     2401 ctataaaacc tactcaggat gagggagaag gctaggtgag tctacctttc cacccggaag
     2461 gaagtcttgg aggaggggaa gcagctccat tcagccttgg gcactacttc aaccaagtgt
     2521 ggcatgagcg gactgtctgt tgttaaaaca gaacaacaac aacacaatga aaacgaagca
     2581 ctttcactaa aactggctca cctcatctag gttagggtac ctatcgttga gtttattaga
     2641 cagttagagt tggctctatt gaaacttaac tcttgcaatc taaaaaataa gactattggt
     2701 tatttggggg gaggtcattt tagcctataa tgtactccat cacaaataaa gcatcatgga
     2761 atgtg
//
