LOCUS       NM_001166705             931 bp    mRNA    linear   ROD 27-JAN-2025
DEFINITION  Mus musculus cilia and flagella associated protein 77 (Cfap77),
            transcript variant 1, mRNA.
ACCESSION   NM_001166705
VERSION     NM_001166705.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 931)
  AUTHORS   Zhou,L., Liu,H., Liu,S., Yang,X., Dong,Y., Pan,Y., Xiao,Z.,
            Zheng,B., Sun,Y., Huang,P., Zhang,X., Hu,J., Sun,R., Feng,S.,
            Zhu,Y., Liu,M., Gui,M. and Wu,J.
  TITLE     Structures of sperm flagellar doublet microtubules expand the
            genetic spectrum of male infertility
  JOURNAL   Cell 186 (13), 2897-2910 (2023)
   PUBMED   37295417
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BB647135.1 and BC147761.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC147760.1, SRR7345562.165962.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2                 BB647135.1         2-3
            3-931               BC147761.1         1-929
FEATURES             Location/Qualifiers
     source          1..931
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 19.38 cM"
     gene            1..931
                     /gene="Cfap77"
                     /gene_synonym="1700101E01Rik; Gm823"
                     /note="cilia and flagella associated protein 77"
                     /db_xref="GeneID:329375"
                     /db_xref="MGI:MGI:2685669"
     exon            1..253
                     /gene="Cfap77"
                     /gene_synonym="1700101E01Rik; Gm823"
                     /inference="alignment:Splign:2.1.0"
     CDS             59..874
                     /gene="Cfap77"
                     /gene_synonym="1700101E01Rik; Gm823"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="cilia- and flagella-associated protein 77
                     isoform 1"
                     /protein_id="NP_001160177.1"
                     /db_xref="CCDS:CCDS50551.1"
                     /db_xref="GeneID:329375"
                     /db_xref="MGI:MGI:2685669"
                     /translation="MPDPAKPGKDLTAWKKKKQPVHRTVSQICPPPRRPLTVVDIRTG
                     MENERLGVVRDSMFQNPLIVKAELGKPRERSCSLPGINFNYGLYIRGLDGGVPEAIGH
                     WNVFKQQPTCPHELTRNYIAMNRGAVKAGLVTARENMLYRELNDIRINDQEDRRQKEP
                     PPIPPNMTFGIRSRPSTPFFDLLQHRYQQLWVQEQKATQQAIKMEKKQKVILGKLYET
                     RSSQLRKYKPPVKLDALWHMPHFKKVCWDCRGRLWQLTSCGFWRFELLILVQH"
     exon            254..353
                     /gene="Cfap77"
                     /gene_synonym="1700101E01Rik; Gm823"
                     /inference="alignment:Splign:2.1.0"
     exon            354..579
                     /gene="Cfap77"
                     /gene_synonym="1700101E01Rik; Gm823"
                     /inference="alignment:Splign:2.1.0"
     exon            580..685
                     /gene="Cfap77"
                     /gene_synonym="1700101E01Rik; Gm823"
                     /inference="alignment:Splign:2.1.0"
     exon            686..787
                     /gene="Cfap77"
                     /gene_synonym="1700101E01Rik; Gm823"
                     /inference="alignment:Splign:2.1.0"
     exon            788..931
                     /gene="Cfap77"
                     /gene_synonym="1700101E01Rik; Gm823"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agacagcgca gaactctgtg ggctttgcag ccaaggtcta atcccggagg cccctgggat
       61 gcctgatccg gcgaaacccg ggaaagacct cacggcatgg aaaaagaaga agcagcccgt
      121 gcatcgcacg gtcagccaga tctgcccgcc gccccgacgg ccgctgacgg tggtcgacat
      181 ccgtacgggc atggagaacg aaaggctggg ggtcgtgcgt gactccatgt ttcagaaccc
      241 gctcatcgtc aaggcagagc ttggcaagcc cagggaaaga agctgtagcc tgcctggcat
      301 caactttaat tatggactct acatccgagg gctggatgga ggggttcctg aagccattgg
      361 gcactggaat gtgtttaagc agcaacctac ctgcccccac gagctgaccc ggaactatat
      421 tgccatgaac cgaggggctg tcaaagctgg cctggtgact gcccgagaaa acatgctcta
      481 tcgcgaactg aatgacatcc gaatcaatga ccaggaagac cggcgacaga aggagccacc
      541 tcctatccct cccaacatga cctttgggat ccgttcacgg ccatcaacac ccttctttga
      601 cctgttacaa catcggtacc agcagctgtg ggtacaggaa cagaaggcca ctcagcaagc
      661 catcaaaatg gagaagaaac agaaggtgat cctggggaag ctgtacgaga cgaggagcag
      721 tcagctgagg aagtacaagc ctccggtgaa gctggatgct ctctggcaca tgcctcactt
      781 caagaaggta tgctgggact gtagaggcag gctgtggcag ctgacatcat gtggcttctg
      841 gagattcgaa ctcctcatac ttgtgcagca ctgagccatc ccgtcagccc tcgctaagac
      901 tcttgataag cacccatgga caagctgctg a
//
