LOCUS       NM_001368718            9635 bp    mRNA    linear   ROD 03-AUG-2024
DEFINITION  Mus musculus cilia and flagella associated protein 47 (Cfap47),
            mRNA.
ACCESSION   NM_001368718
VERSION     NM_001368718.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 9635)
  AUTHORS   Liao,H.Q., Guo,Z.Y., Huang,L.H., Liu,G., Lu,J.F., Zhang,Y.F. and
            Xing,X.W.
  TITLE     WDR87 interacts with CFAP47 protein in the middle piece of
            spermatozoa flagella to participate in sperm tail assembly
  JOURNAL   Mol Hum Reprod 29 (1) (2022)
   PUBMED   36571501
REFERENCE   2  (bases 1 to 9635)
  AUTHORS   Liu,C., Tu,C., Wang,L., Wu,H., Houston,B.J., Mastrorosa,F.K.,
            Zhang,W., Shen,Y., Wang,J., Tian,S., Meng,L., Cong,J., Yang,S.,
            Jiang,Y., Tang,S., Zeng,Y., Lv,M., Lin,G., Li,J., Saiyin,H., He,X.,
            Jin,L., Toure,A., Ray,P.F., Veltman,J.A., Shi,Q., O'Bryan,M.K.,
            Cao,Y., Tan,Y.Q. and Zhang,F.
  TITLE     Deleterious variants in X-linked CFAP47 induce
            asthenoteratozoospermia and primary male infertility
  JOURNAL   Am J Hum Genet 108 (2), 309-323 (2021)
   PUBMED   33472045
REFERENCE   3  (bases 1 to 9635)
  AUTHORS   Harrow,J.L., Steward,C.A., Frankish,A., Gilbert,J.G.,
            Gonzalez,J.M., Loveland,J.E., Mudge,J., Sheppard,D., Thomas,M.,
            Trevanion,S. and Wilming,L.G.
  TITLE     The Vertebrate Genome Annotation browser 10 years on
  JOURNAL   Nucleic Acids Res 42 (Database issue), D771-D779 (2014)
   PUBMED   24316575
REFERENCE   4  (bases 1 to 9635)
  AUTHORS   Evsikov,A.V., Graber,J.H., Brockman,J.M., Hampl,A., Holbrook,A.E.,
            Singh,P., Eppig,J.J., Solter,D. and Knowles,B.B.
  TITLE     Cracking the egg: molecular dynamics and evolutionary aspects of
            the transition from the fully grown oocyte to embryo
  JOURNAL   Genes Dev 20 (19), 2713-2727 (2006)
   PUBMED   17015433
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL844174.2 and AL807760.6.
            
            On Feb 22, 2019 this sequence version replaced NM_001368718.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMN00849374, SAMN00849375
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 5' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-261               AL844174.2         132756-133016       c
            262-413             AL844174.2         131512-131663       c
            414-529             AL844174.2         130244-130359       c
            530-668             AL844174.2         128309-128447       c
            669-897             AL844174.2         125954-126182       c
            898-1058            AL844174.2         125541-125701       c
            1059-1186           AL844174.2         123587-123714       c
            1187-1422           AL844174.2         120789-121024       c
            1423-1612           AL844174.2         113555-113744       c
            1613-1829           AL844174.2         112233-112449       c
            1830-1982           AL844174.2         109343-109495       c
            1983-2175           AL844174.2         106784-106976       c
            2176-2272           AL844174.2         106596-106692       c
            2273-2489           AL844174.2         104700-104916       c
            2490-2731           AL844174.2         104171-104412       c
            2732-2862           AL844174.2         98269-98399         c
            2863-2985           AL844174.2         95551-95673         c
            2986-3117           AL844174.2         94321-94452         c
            3118-3195           AL844174.2         91661-91738         c
            3196-3340           AL844174.2         81695-81839         c
            3341-3435           AL844174.2         74094-74188         c
            3436-3577           AL844174.2         67934-68075         c
            3578-3672           AL844174.2         63522-63616         c
            3673-3832           AL844174.2         62096-62255         c
            3833-4028           AL844174.2         61223-61418         c
            4029-4238           AL844174.2         55525-55734         c
            4239-4339           AL844174.2         50041-50141         c
            4340-4486           AL844174.2         46782-46928         c
            4487-4715           AL844174.2         45486-45714         c
            4716-4937           AL844174.2         44201-44422         c
            4938-5019           AL844174.2         32474-32555         c
            5020-5142           AL844174.2         31150-31272         c
            5143-5335           AL844174.2         26101-26293         c
            5336-5430           AL844174.2         17686-17780         c
            5431-5547           AL844174.2         17293-17409         c
            5548-5682           AL844174.2         12082-12216         c
            5683-5798           AL844174.2         6950-7065           c
            5799-5949           AL844174.2         6153-6303           c
            5950-6038           AL844174.2         2319-2407           c
            6039-6119           AL807760.6         124911-124991       c
            6120-6187           AL807760.6         118735-118802       c
            6188-6333           AL807760.6         113721-113866       c
            6334-6442           AL807760.6         110564-110672       c
            6443-6666           AL807760.6         108428-108651       c
            6667-6841           AL807760.6         105072-105246       c
            6842-6883           AL807760.6         104483-104524       c
            6884-7080           AL807760.6         99220-99416         c
            7081-7224           AL807760.6         95212-95355         c
            7225-7398           AL807760.6         94483-94656         c
            7399-7510           AL807760.6         89692-89803         c
            7511-7639           AL807760.6         78970-79098         c
            7640-7737           AL807760.6         76944-77041         c
            7738-7913           AL807760.6         74933-75108         c
            7914-8021           AL807760.6         73275-73382         c
            8022-8133           AL807760.6         67015-67126         c
            8134-8238           AL807760.6         64401-64505         c
            8239-8395           AL807760.6         63225-63381         c
            8396-8494           AL807760.6         57834-57932         c
            8495-8654           AL807760.6         48424-48583         c
            8655-8749           AL807760.6         46932-47026         c
            8750-8905           AL807760.6         45202-45357         c
            8906-9077           AL807760.6         40040-40211         c
            9078-9239           AL807760.6         39398-39559         c
            9240-9408           AL807760.6         21825-21993         c
            9409-9635           AL807760.6         10737-10963         c
FEATURES             Location/Qualifiers
     source          1..9635
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 38.37 cM"
     gene            1..9635
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /note="cilia and flagella associated protein 47"
                     /db_xref="GeneID:636104"
                     /db_xref="MGI:MGI:3781475"
     exon            1..261
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     CDS             67..9621
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /note="calponin homology domain containing 2"
                     /codon_start=1
                     /product="cilia and flagella-associated protein 47"
                     /protein_id="NP_001355647.2"
                     /db_xref="CCDS:CCDS90732.1"
                     /db_xref="GeneID:636104"
                     /db_xref="MGI:MGI:3781475"
                     /translation="MDAERGSVAPRDIDTLKKEVQLRVNPLVLKFQDAVSGKVYRLPL
                     TVHNLGRWNQKIRFQEPSKPQFKLLLTSLDKELASGLQMTAMVEYHPNKNEDMSDHIF
                     ISVGNKVLDIPLFGLIPVCQLEIVPVVDFGTLVANSKVHCKEITIINRGKAPGKFKAE
                     YQGQLPIVISPSSGIVKAKTSMVIKVDFCADQAQIVNEMARVSLQGCPETFLNIKVRV
                     VEQIIELFHMNSERKLECIRFGSVFFGTSKLEHALLYNNSPESINWVAIMQDDCVGEE
                     LGTNIHQRTDIAINNISYLNKIKKIDMTDFMSCVPNEGTLLPYQKIVITFCFSPKLVV
                     DTKKDVGPSHRQDYALFVRFDSVGSKDGFLRDDNSNTMKSNRLQKVELALTGSGLPVI
                     LQFDPGKSLTFAPCHMGEHSDILCIVKNQSISLPVMYHFKKTAHFKMDPERGKIDEGC
                     IQNVICSFVPHQIGVFKVKQVIEIIGPVADDNLRSLSMKPFLYIHLNFSSTCKAFTRK
                     VGVKINPGISPLISNPTRHFVAKDSEKKDDLPPVAAMLQSTATKLHDHCLKDESTKNA
                     LIAFPNDRATSIRSGDHHEHFRTIFTKIPRYDYTDPDYEYTDLEKLERKAHRDYYTNY
                     INNLRTIRLRKEAQRERKFPVNEVDIGMLPLSGLKSPPLSQSEIEEEIPPSLKASSLK
                     ANRLLSTKKIASRESECLQRKITRGLKSKPTTHQEKQECSKVLTPKQIHQVIVGPSVL
                     NFGNICVKSTNTHLLHIVNMLPMYILIQLDVDFEELQKTKQFSYVIPPTSSTYISMVF
                     ESSTSGKFWKSFTFKINNIPGGHILVMAAILPVKLELSSNEIVLRPQSFLLKTCFRGT
                     VRLYNHLNCPAQFGWKPVTTLRGIAFTICPAQGTVDPYCSLECEVTWQPGFSSPDKGE
                     FLLQVSGGNTLTLKCIAHVGHTKVTFLEPRILFSNCSQGLTTWRKAILHNIGQNHAYF
                     KVCDQSLLSTINIVPSEGIIPFGGITVLNISCTPSVAEKFDTRAKVAIHHANVIDLRI
                     GGSVEIPDVEILPSTFNFSGTYVGTTEIIPFIIKNRGVTRARVEFNLKEFPLFAMDFK
                     GNAGECKNVEGPYMYAIEVEEGTSAECGITFSPVEVATYDFSFPVLINSFKASDLYCE
                     YLSQQKVLMPRVSPLIPPCFVQATVLRAPLELSSTVFLFKIPLYEFQHNKEVTRIQDL
                     VLHNISKKTVLWSLDIGRIDKYFKSGIFKFTALIGSLKPNEKYTISIHFCPKQTITYL
                     ADVAIRLNDNLFDYRILHLIGEIQLPKISFDPSFICFTPVPLDVTTGVDIRILPQNYF
                     SNSTLHFKIPTAKLLDNDEIHPLTVTFPNGRVIKGSNTGLNDEILCHLSFSSSKPVSF
                     FANLFFSDDRNNWFSLPVTATSENCILTIYLYLAVHLDTQRVVLKEEKQGNIKKPRGS
                     FLVPRRDSKSFASQKMKRGSLVPKFNDAEVICGNLFVGMEISRDYFDSDESIAEKLYA
                     KYLEKEEKCQQFFAPEEGSKAFDYFQKVVNAAQTWFSLFGWPEGPHSLSIPETIRRDV
                     QKIQFYSTSSPPKKFSRQSDFSKYNKTIYDVILHLSGKLPPGINAGQSLPVDNVERVM
                     QLHLQHASLLDFITAQGGCISHVLPEFLLEPKDYMKWLEITTATKSTALSTLKGNYSV
                     NIDMDNFEAWSKRAWTDVFLQIYKVTILSRVTPHCTSSMPILHGENKSKISPCFASSN
                     IYSDSERILLSWLNTNYESQRTSIWKNNKSDVPPGRWIVNFDSDLLDGLVFATQLAAY
                     CPFLIETYFINMYTKPKRPEQYLHNCLIIINSLREIGFDLNIQAIDICDPNPVLMLML
                     CVYLYERLPTYLPKKVVPFSCTLYDVVVGQILLKNPSLKNLVYTATIVGRDANNFCLA
                     QTGNVVTIGPKNHIVLVVKFVSRFLHPAEATLLLISRPKCGIGGSTLAFALKGEIRNF
                     KAIDVIKCKAPCYQWKEVTVNVKNPFPSGGDFHVILVESTTLMYLPAQVTDSSKVSVM
                     PDHMRSSDYAADQSSSHAENGLRTSIKSNFIREFFCSSTTLSLRPKTSSSIDVYYLPF
                     DMHVRYCAIILSNKDIGDLIYIIEGRGLIPLPSNFLPLEPPSPIDYSTSLEEDKEDPI
                     LYLNCKPHQILDMDLKIPLTNEAKEKALAFAAQQQMSTLEYERRAISGTLESSTIRAA
                     VALLGLTKIECLLLFNMSKLKKPKSILYTTELSLPAHFNIPRKIYIPQIPEPPDFHMQ
                     SLQIKPQIVSGERPFQKPLPSIQAALEGTVSIPLRFAPLGSGRYPCKLLLLSRHDVRV
                     YLLEGIVNEEVPEAELLFKTPAFQPLTQNIPIKNESKKLSKFHVKIEGEWFHGPPILH
                     VGPGETIQYPLTFKPILECEIMGKLTLQNEVDGMAHIVEIDGIGTKPIALDHIIIDCK
                     VGKVTDKSIIVPNYTKSLLTFKVTSDLSIVWGNSFITIEPDDSIPYTLHVCPWKRGTF
                     KGAIMFFVKSRDEEESQEETDTEKDFSSQETPSDQSTIIFEEYSEEKVKALKIWYHLE
                     IRSSPGPPVDIIELHCIALETTCIEIPISNSKNQPVCLDVKLTCSALNGPVEMTLAPL
                     ESVTYIVWYSPATTGYKEESIIFQPEMGEEFWYLLKLTTELPKPKEIPEMQCDLGKKI
                     IQTLPLYNPTHETLELRIRNSNPINFVIELNRKLPLVLLPHSTTELSVYFHPSGLGRH
                     GHETCINFYCTQFKEWKFYLFGVGLYPRPIELKRVTTILGLQASVMVHFRNPTSEDVS
                     VDLILTNKEQPKGLAIDQCWKTFLHENAAFRFSSLRRTHGIIVPPKGNLDIPVLFIPS
                     TMTLYKTMVIVKMKRTNKKNWLIDNFDELSAETKRYMGVGYGEIQAIHWMYPIIGLPQ
                     APPPKSSPVIIRCQANKQREEKVEVSMLGSFFNTHPKPDMTEFLVFPKRNVYKSIYED
                     VDVNSKRREFEYEIEFESEDVKSNLDSFVTLYLFRKHFNVKSEIISLIFNVIFTPRKP
                     FRANVTLNVECITEGIWKFPITLIATEPEVEDVINIHGIGLFKTSETEFRLTSQTRYY
                     EPFVAHFLPGSDQEFFVKPQSGELPPFYTKGIVIIVGFKPRMYSKKYQATLVIQTDEI
                     YWLYEINGLAPSSKSLTHVTAKVDATSKIYDCMPPIQRNFIRENAKLRSTAVSSTVKG
                     APLFKKHK"
     exon            262..413
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            414..529
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            530..668
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            669..897
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            898..1058
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            1059..1186
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            1187..1422
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            1423..1612
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            1613..1829
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            1830..1982
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            1983..2175
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            2176..2272
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            2273..2489
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            2490..2731
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            2732..2862
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            2863..2985
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            2986..3117
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            3118..3195
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            3196..3340
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            3341..3435
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            3436..3577
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            3578..3672
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            3673..3832
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            3833..4028
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            4029..4238
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            4239..4339
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            4340..4486
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            4487..4715
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            4716..4937
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            4938..5019
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            5020..5142
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            5143..5335
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            5336..5430
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            5431..5547
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            5548..5682
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            5683..5798
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            5799..5949
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            5950..6038
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            6039..6119
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            6120..6187
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            6188..6333
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            6334..6442
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            6443..6666
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            6667..6841
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            6842..6883
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            6884..7080
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            7081..7224
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            7225..7398
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            7399..7510
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            7511..7639
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            7640..7737
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            7738..7913
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            7914..8021
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            8022..8133
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            8134..8238
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            8239..8395
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            8396..8494
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            8495..8654
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            8655..8749
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            8750..8905
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            8906..9077
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            9078..9239
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            9240..9408
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     exon            9409..9635
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /inference="alignment:Splign:2.1.0"
     regulatory      9617..9622
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /note="hexamer: AATAAA"
     polyA_site      9635
                     /gene="Cfap47"
                     /gene_synonym="100041373; Chdc2; Gm16462; Gm3297; Gm7173;
                     Gm8787"
                     /note="major polyA site"
ORIGIN      
        1 gttgtctctc gccagtcggg agttggtcaa gtccgcacct ggttgctggc tctttagagg
       61 gctgtaatgg atgcagagcg gggctcagta gcccctcggg atatagatac ccttaagaag
      121 gaagttcagc tgcgggtaaa tcccctggtg ctgaagttcc aggatgcagt atctgggaaa
      181 gtataccgcc tccctcttac tgtacacaat ttgggccgtt ggaaccagaa gatcaggttt
      241 caagagccat cgaagccaca gttcaaattg ttgttgacca gtctggataa ggagcttgct
      301 tctggccttc agatgacagc aatggtggaa tatcatccta ataaaaatga agacatgtct
      361 gatcacatct ttatttctgt aggaaataaa gtcctagata ttcctctatt tgggctgatt
      421 ccagtctgtc agctggaaat tgtaccagta gttgattttg gcacattggt tgccaatagt
      481 aaagtgcatt gtaaagagat tactattatt aaccgtggca aagctccagg gaagtttaaa
      541 gcagaatacc agggtcagtt acctattgtc atttctccaa gtagtggtat agtaaaggct
      601 aaaacatcaa tggtcatcaa agtggatttc tgtgcagacc aggcccaaat tgtaaatgaa
      661 atggcaagag tgagtttgca aggttgtcct gaaacattct tgaacatcaa agtgcgtgtg
      721 gttgaacaga tcatcgaatt gtttcacatg aatagtgaaa ggaaattgga atgtatacga
      781 tttggttctg tgttcttcgg aacatcaaaa cttgaacatg ctcttctgta taacaatagc
      841 cctgaatcca taaactgggt ggcaataatg caagatgatt gtgttggaga agagctggga
      901 acaaatattc atcaaaggac agatattgcc ataaataata tctcctactt aaacaaaata
      961 aagaaaatag atatgactga ttttatgtcc tgcgttccca acgaagggac tttactccct
     1021 tatcaaaaga ttgtcattac attttgtttc agcccaaagc tggtagttga tactaaaaag
     1081 gatgttggac cttcacatag gcaagactat gctctctttg tgagatttga ttctgtggga
     1141 agtaaagatg gatttttgag agatgataac tctaatacca tgaaaagtaa tcgacttcaa
     1201 aaagtggaat tagctctgac aggctctgga cttccagtca tattacagtt tgatccagga
     1261 aaatcactta cttttgcacc ttgtcacatg ggtgaacatt cagatattct ttgtattgta
     1321 aaaaatcagt ccatatcact tcctgtgatg taccatttta aaaaaactgc acactttaaa
     1381 atggatcctg aaaggggcaa aattgatgaa ggatgtattc agaatgtgat atgttcattt
     1441 gttccacatc aaattggagt atttaaagta aagcaagtga ttgagattat tggacccgtg
     1501 gcagatgata atctacggtc tttgtcaatg aaaccttttc tttacataca tttaaacttc
     1561 agcagcactt gcaaagcttt caccaggaaa gttggagtga aaattaatcc tggtatatcc
     1621 cccttgatca gtaatcccac aagacacttt gtggctaaag attcagagaa aaaggacgat
     1681 cttccacctg tagctgcaat gctccagtca acagcaacaa aacttcatga tcattgctta
     1741 aaagatgagt caacgaagaa tgcactgatt gcttttccta atgacagagc tacaagtatc
     1801 aggtctggag atcaccatga acatttcaga acaattttca caaagatacc aaggtatgat
     1861 tatacagatc ctgattatga atacactgat ttggaaaaac tggaaagaaa agcacatcga
     1921 gattactaca caaactatat taacaatttg agaactatac gcctacgtaa agaagcacag
     1981 agggaacgaa agtttccagt taatgaagta gatattggca tgctgccatt atctggtcta
     2041 aagtcaccac cactctctca atcagaaata gaagaggaaa tacctccatc cttaaaagct
     2101 tcttctctca aagctaacag attgttaagc accaagaaaa tagcatctag agagtcagaa
     2161 tgtctgcaga gaaagatcac cagagggctt aaatcgaagc caaccactca ccaagaaaaa
     2221 caggaatgca gcaaagtttt gacaccaaag caaattcatc aagtaattgt tggaccatct
     2281 gtccttaatt ttggtaatat ttgtgtgaaa tctacaaata ctcacctact tcatattgtt
     2341 aatatgctgc ccatgtatat attgatccag ttagatgttg attttgaaga acttcagaaa
     2401 accaagcaat tttcatatgt gatcccacct acatctagta catatatttc gatggtattt
     2461 gaatcttcca caagtggaaa attttggaaa tcattcacct ttaaaattaa taacatacct
     2521 ggtggacaca tattagtgat ggctgccatc ctgcctgtaa aacttgagct gtcttctaat
     2581 gagattgtat tgagaccaca atccttcttg ttgaaaacct gttttcgtgg tacagttagg
     2641 ctatataatc atctcaattg ccctgcccaa tttggatgga aaccagtaac tacattgaga
     2701 ggaattgcat ttactatttg tccagcccaa ggcactgttg atccatattg ttcattggaa
     2761 tgtgaagtca catggcagcc aggttttagt tctccggaca agggagaatt tttgctacaa
     2821 gtctctggag gaaatacttt gacactgaag tgtattgcac atgttggtca cactaaagtc
     2881 acctttttag agccaagaat actgttcagt aattgttctc aaggtttaac tacttggagg
     2941 aaagccatac ttcacaatat agggcaaaac catgcttatt tcaaggtttg tgatcaaagc
     3001 cttttgtcta ccattaatat tgttccatca gagggaataa ttccatttgg gggaataact
     3061 gttcttaata tctcctgtac accctctgta gcagaaaagt ttgatacaag agcaaaggtt
     3121 gctattcacc atgcaaatgt catagatctt aggattggtg gatctgtcga aattcctgat
     3181 gttgaaatct tacctagcac atttaatttt agcggtacct atgttggcac tacagaaatt
     3241 attccattta taataaaaaa cagaggtgtg acacgtgcca gagtggagtt caacctaaag
     3301 gaatttccac tttttgcaat ggattttaag ggaaatgcag gggagtgcaa aaatgtggaa
     3361 ggtccttata tgtatgcaat agaggtagaa gaaggcacat ctgcagaatg tggcataaca
     3421 ttttctccgg tagaagtggc aacatatgac tttagctttc cggtccttat taattccttt
     3481 aaggcttcag atctctactg tgaatatttg tcacagcaaa aggttttgat gccaagagtc
     3541 tcaccactta ttccaccgtg ctttgttcaa gctactgtgt tgcgggcacc attggaatta
     3601 tccagcactg tgtttctctt taaaatccca ttatatgagt ttcagcataa taaggaggtc
     3661 acgagaattc aggatcttgt cttacataat atttcaaaaa aaacggttct ctggtcattg
     3721 gatattggca gaattgacaa atatttcaaa agcggcatat tcaaatttac tgcactgatt
     3781 ggaagcctga aaccaaatga aaagtacact atttccatac atttctgtcc aaaacagacc
     3841 ataacatacc tagcagatgt tgctatacgt ttaaatgata atttatttga ctatagaata
     3901 ttacatctga ttggagagat acaattacca aagatatctt ttgatccatc atttatatgt
     3961 tttactcctg ttcctttgga tgttacaact ggagtagata tcagaatttt gccacaaaac
     4021 tatttcagta attcaactct tcacttcaag attcccactg caaagcttct tgataatgat
     4081 gagattcacc cacttactgt gacatttcca aatggcagag tcatcaaagg ctctaatact
     4141 ggactaaatg atgagatatt atgtcatctt agtttcagtt catctaaacc tgtttcattt
     4201 tttgccaatc ttttttttag tgatgataga aataactggt tctcactccc agttactgca
     4261 acatcagaaa attgtattct tactatttat ctatatttgg cagttcattt agacactcag
     4321 agagttgttt taaaggaaga aaaacaagga aatattaaaa agcctagagg cagttttctg
     4381 gttccacgta gagattccaa atcatttgct tcacagaaaa tgaaaagagg atctcttgtt
     4441 cccaagttta atgatgctga agttatatgt gggaacctat ttgttgggat ggaaatatca
     4501 cgtgattact ttgactcaga tgaaagtatt gcagaaaaat tatatgctaa atatctggaa
     4561 aaggaagaga agtgtcaaca gttctttgct cctgaggaag gatcgaaggc ttttgactat
     4621 tttcagaagg ttgtgaatgc agctcagacg tggttcagtc tctttggctg gccagaagga
     4681 ccccattctc tttctattcc tgagacaata agaagggatg tgcagaaaat acaattctat
     4741 tcaacatcct caccacccaa gaaattttcc agacagtctg atttttccaa atataataag
     4801 acaatttatg acgtgatact tcacttgagt ggaaaactgc cacctggaat taacgcaggc
     4861 cagtcgttac ccgtggataa tgttgaaagg gtgatgcaac tccatttgca gcatgcctca
     4921 cttctagact ttatcactgc tcaaggtgga tgcatttctc atgtgctgcc agaatttttg
     4981 cttgaaccaa aagattatat gaagtggctg gaaattacaa cagccactaa aagcacggct
     5041 ctctccacac ttaagggaaa ctattctgtt aatatagata tggataattt tgaagcctgg
     5101 agtaaacggg catggacaga tgtatttctt cagatataca aggttacgat tctatctcgg
     5161 gtgacaccac attgcaccag ttctatgcca atcttgcatg gggagaataa atcaaaaatc
     5221 agcccttgtt ttgcatccag caatatatat tcagattctg aaaggattct acttagttgg
     5281 ttgaatacaa actatgaaag ccaacgaact agtatatgga aaaataataa aagtgatgtg
     5341 ccccctggaa gatggatagt gaattttgat tcagaccttc ttgatggcct tgtgtttgct
     5401 acacagctgg cagcatactg cccatttttg attgagactt attttataaa tatgtacaca
     5461 aaaccaaagc gcccagaaca atatttgcac aattgtttga ttattataaa tagtcttcgt
     5521 gaaattggat ttgatttaaa catacaggcc atcgacatct gtgatccaaa cccagtgctg
     5581 atgctaatgc tctgtgttta cttgtatgag aggctcccta catacctccc caagaaagtg
     5641 gtaccattct cttgtactct atatgatgtt gtggtgggac agatattatt gaaaaaccca
     5701 agcttgaaga atttagtgta taccgctaca attgttggga gagatgctaa taacttctgt
     5761 cttgcacaga cagggaatgt tgtaacaatt ggcccaaaaa atcacattgt gcttgttgtg
     5821 aaatttgtaa gtcgctttct ccatcctgct gaagctacac tattattaat ttcaagacct
     5881 aagtgtggaa taggaggcag tacattggct tttgctctaa agggagaaat acgaaatttt
     5941 aaagcaattg atgtcataaa atgtaaagct ccatgttatc aatggaaaga agtcactgtg
     6001 aatgtgaaaa acccctttcc aagcggtgga gattttcatg ttattctcgt ggaatccaca
     6061 acacttatgt atttgccagc acaagtaact gattcttcaa aggtctctgt gatgcctgat
     6121 catatgagga gtagcgacta tgctgctgat cagagttctt cccatgctga aaatggctta
     6181 agaacatcaa ttaagtctaa cttcatcaga gaattcttct gttcatcaac aacactttcc
     6241 ctgagaccaa aaacatcttc aagtatagat gtctactatc ttccctttga catgcatgtt
     6301 cgctattgtg ccatcatcct gagcaacaaa gatattggag atttgatata cattatagaa
     6361 ggaagaggtt tgataccctt gccttccaat ttccttccat tggagcctcc aagtccaatt
     6421 gactacagca cttctctaga agaagataag gaggatccaa ttctttattt gaattgtaaa
     6481 ccccatcaaa tccttgatat ggaccttaaa ataccactga ctaatgaagc aaaggaaaag
     6541 gctttggctt ttgcagcaca gcaacagatg tcaactcttg aatatgaacg aagggctatc
     6601 tctggtactc tggagagcag taccattcgt gcggctgttg ccctcttagg acttaccaag
     6661 attgagtgcc ttttgctctt taatatgtca aaattgaaga agcctaaatc cattttatat
     6721 acaacagaac tgagccttcc tgcacatttc aatataccca ggaaaattta catccctcag
     6781 attccagaac ctccagattt ccatatgcaa tctcttcaaa ttaaacctca aattgtatca
     6841 ggagaacggc cattccagaa accacttcca agcatccaag cagctttaga aggaaccgtt
     6901 tcaattcctc tacgatttgc tccccttgga tctggaagat acccttgtaa acttttgttg
     6961 ttatcaagac atgatgtacg tgtgtattta cttgaaggta tagtaaatga agaagtacca
     7021 gaggctgaat tgttatttaa aacaccagca tttcaaccgc ttacacaaaa tatcccaata
     7081 aaaaatgaat caaagaaact ttcgaaattt catgttaaaa tagaaggaga gtggtttcat
     7141 ggacctccaa ttttacatgt tggccctggt gaaactatcc agtatccttt gacattcaaa
     7201 ccgattttgg aatgtgaaat tatgggtaaa cttactttac aaaatgaagt agatggaatg
     7261 gcacacatcg ttgaaataga tgggattggg acaaaaccca ttgccttgga ccacatcatt
     7321 atagactgca aagtgggaaa agtgacagat aagtccataa tagtgcctaa ttatacaaaa
     7381 agtctcctga catttaaggt aacttcagat ctctcaatag tgtggggaaa ttcctttatc
     7441 accatagaac ctgacgactc aattccatat actctccatg tatgtccttg gaaacgtggc
     7501 acattcaaag gtgcaattat gtttttcgtt aagagcagag atgaggaaga gtctcaggaa
     7561 gagacagata cagagaaaga cttctcttct caggaaacgc catcagatca atctaccatt
     7621 atttttgagg aatactcaga ggaaaaggtt aaagctctaa aaatctggta tcatcttgaa
     7681 atccgtagtt ctcctggacc tcctgtagat ataattgaac ttcattgtat tgccctggag
     7741 acaacatgca ttgaaattcc tatctctaat tcaaaaaatc aacctgtttg tttagatgtg
     7801 aaattaacat gttctgccct taatggacca gtagaaatga cattggctcc attggaaagt
     7861 gtgacctata ttgtatggta ttctccagca accacaggct ataaagaaga aagcattatt
     7921 tttcaacctg aaatgggtga agaattctgg tatttactta aattaacaac tgaacttcca
     7981 aaaccaaagg aaataccaga aatgcagtgt gatcttggaa agaagatcat tcaaaccctt
     8041 cctttatata atcctacgca tgaaacttta gaattgagaa tacggaacag taatcctata
     8101 aattttgtca tcgagcttaa cagaaaatta ccattggtcc tcctacccca ctctaccaca
     8161 gagctctctg tttactttca tccatctgga cttggaagac atggtcatga aacatgcatt
     8221 aacttctatt gtactcagtt taaagaatgg aaattctacc tgtttggagt aggactatac
     8281 cccaggccta tagaattgaa aagagtaaca actattcttg gtcttcaggc atctgtcatg
     8341 gtacatttca gaaatcctac cagtgaagat gtttctgttg atctcatatt aacaaataaa
     8401 gaacaaccca agggtcttgc aattgaccag tgctggaaga ccttcctcca tgagaatgct
     8461 gcctttcggt ttagctctct gagaagaaca catggaatta tagtgcctcc taaaggaaat
     8521 ttagatatcc cagtcttatt tataccttct actatgacat tatataaaac aatggtgatt
     8581 gttaaaatga agagaacaaa caaaaagaat tggctaattg acaattttga tgaactaagt
     8641 gcagagacta agagatatat gggagtaggc tatggagaaa ttcaagcaat acactggatg
     8701 taccctatca ttggacttcc ccaggcacca ccacctaaaa gttctccagt tatcataaga
     8761 tgtcaggcca acaaacaaag agaagaaaaa gtggaagtgt caatgcttgg tagttttttt
     8821 aatacacatc caaaacctga catgacagaa tttttagttt ttccaaaaag aaatgtatat
     8881 aaaagtattt atgaagatgt tgatgtaaat tcaaaaagac gtgaatttga gtatgaaatc
     8941 gagtttgaat ctgaagatgt gaagtctaac ctggactcct ttgtaacttt atatttattc
     9001 agaaaacatt ttaacgtaaa aagtgaaata atttcgttga ttttcaatgt gatatttaca
     9061 ccaaggaaac cattcagggc taatgtcaca ttaaatgttg agtgcataac agaaggaatc
     9121 tggaagtttc ctataacatt gattgctact gagcccgaag tagaggatgt tattaacatc
     9181 catggaatag gtttattcaa gacatctgaa acagaatttc gactgacaag tcagacaagg
     9241 tattatgagc catttgtggc ccattttctg ccaggcagtg atcaagagtt ttttgtaaaa
     9301 cctcagtctg gagaactccc tccattttat acaaaaggaa ttgtcatcat tgtaggattt
     9361 aaaccccgaa tgtacagtaa gaaatatcaa gcaacacttg taatacagac agatgaaata
     9421 tattggttgt atgaaataaa cgggttagct ccatcatcga aatcactgac acatgtaaca
     9481 gccaaagttg atgctactag caagatatat gactgcatgc caccaattca acgtaatttt
     9541 attcgtgaaa atgctaaact tcgaagcaca gcagtatctt ctactgttaa aggtgctcct
     9601 ttattcaaaa agcataaata aaatttttaa acatt
//
