LOCUS       NM_026502               1163 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus cilia and flagella associate protien 298 (Cfap298),
            mRNA.
ACCESSION   NM_026502
VERSION     NM_026502.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1163)
  AUTHORS   Gitton,Y., Dahmane,N., Baik,S., Ruiz i Altaba,A., Neidhardt,L.,
            Scholze,M., Herrmann,B.G., Kahlem,P., Benkahla,A., Schrinner,S.,
            Yildirimman,R., Herwig,R., Lehrach,H. and Yaspo,M.L.
  CONSRTM   HSA21 expression map initiative
  TITLE     A gene expression map of human chromosome 21 orthologues in the
            mouse
  JOURNAL   Nature 420 (6915), 586-590 (2002)
   PUBMED   12466855
REFERENCE   2  (bases 1 to 1163)
  AUTHORS   Reymond,A., Marigo,V., Yaylaoglu,M.B., Leoni,A., Ucla,C.,
            Scamuffa,N., Caccioppoli,C., Dermitzakis,E.T., Lyle,R., Banfi,S.,
            Eichele,G., Antonarakis,S.E. and Ballabio,A.
  TITLE     Human chromosome 21 gene expression atlas in the mouse
  JOURNAL   Nature 420 (6915), 582-586 (2002)
   PUBMED   12466854
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CX236612.1 and AK045905.1.
            
            On Aug 8, 2009 this sequence version replaced NM_026502.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK045905.1, SRR1660813.109175.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164139
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-122               CX236612.1         1-122
            123-1163            AK045905.1         102-1142
FEATURES             Location/Qualifiers
     source          1..1163
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 52.17 cM"
     gene            1..1163
                     /gene="Cfap298"
                     /gene_synonym="1110004E09Rik"
                     /note="cilia and flagella associate protien 298"
                     /db_xref="GeneID:68001"
                     /db_xref="MGI:MGI:1915251"
     exon            1..268
                     /gene="Cfap298"
                     /gene_synonym="1110004E09Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             130..1002
                     /gene="Cfap298"
                     /gene_synonym="1110004E09Rik"
                     /note="UPF0769 protein C21orf59 homolog; protein kurly
                     homolog"
                     /codon_start=1
                     /product="cilia- and flagella-associated protein 298"
                     /protein_id="NP_080778.2"
                     /db_xref="CCDS:CCDS28321.1"
                     /db_xref="GeneID:68001"
                     /db_xref="MGI:MGI:1915251"
                     /translation="MVVLHVKRGDESQFLLQAPGSTELEELTAQVARVYNGRLKVHRL
                     CSEMEELAEHGVFLPPNMQGLTDEQIEELKLKDEWGEKCVPSGGSVFTKDEIGRRNGQ
                     APNEKMKQVLKKTVEEAKAIVSKKQVEAGVFVTMEMVKDALDQLRGAVMIVYPMGLPP
                     YDPIRMEFENKEDLSGTQAALEVIQESEAQLWWAAKELRRTKKLSDYVGKNEKTKIIV
                     KIQQRGQGAPAREPVISSEEHKQLMLFYHRRQEELKKLEENDDDSCLNSPWADNTALK
                     RHFHGVKDIKWRPR"
     exon            269..436
                     /gene="Cfap298"
                     /gene_synonym="1110004E09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            437..504
                     /gene="Cfap298"
                     /gene_synonym="1110004E09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            505..663
                     /gene="Cfap298"
                     /gene_synonym="1110004E09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            664..795
                     /gene="Cfap298"
                     /gene_synonym="1110004E09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            796..891
                     /gene="Cfap298"
                     /gene_synonym="1110004E09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            892..1163
                     /gene="Cfap298"
                     /gene_synonym="1110004E09Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1106..1111
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Cfap298"
                     /gene_synonym="1110004E09Rik"
                     /note="hexamer: AATAAA"
     regulatory      1110..1115
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Cfap298"
                     /gene_synonym="1110004E09Rik"
                     /note="hexamer: AATACA"
     polyA_site      1126
                     /gene="Cfap298"
                     /gene_synonym="1110004E09Rik"
                     /note="major polyA site"
     polyA_site      1129
                     /gene="Cfap298"
                     /gene_synonym="1110004E09Rik"
                     /note="major polyA site"
ORIGIN      
        1 gccgcgttcc acggttcctc ctcggagcag cggttaatct caggctggtg tgggtccggc
       61 cgacccggct cgggcctcgt ggtccctgcc ccgcagcctt gccacctcgg cggcgcctct
      121 ggcgcagcca tggttgtgct gcacgtgaag agaggcgacg agagccagtt cttactgcag
      181 gcgcccggga gcacggagct ggaagagctc acggcgcagg tggcccgcgt ctacaacggg
      241 cggctgaagg tgcaccggct ctgctcagag atggaggagc tggcggaaca cggtgtcttt
      301 ctgcccccta atatgcaagg gctgactgat gagcagatcg aagagctgaa actgaaggac
      361 gagtgggggg agaagtgtgt gcccagtgga gggtctgttt ttacgaagga cgagatcggg
      421 cggaggaacg ggcaagctcc aaatgagaaa atgaagcagg ttttaaagaa gacggtagaa
      481 gaagccaagg cgatagtgtc taagaaacaa gtagaagctg gagtctttgt taccatggag
      541 atggtgaaag atgccttgga ccagcttcga ggtgcggtca tgatcgttta tcccatgggg
      601 ctgccaccat acgatcctat ccggatggaa tttgaaaata aagaagattt gtcaggaact
      661 caggcagccc tcgaagtcat ccaggagtcg gaggcacagc tgtggtgggc cgccaaggag
      721 ctgagaagaa caaagaagct ttctgactat gtggggaaaa atgagaaaac caaaatcatc
      781 gtcaagatcc agcagagagg gcagggtgcc ccagcccggg agcctgtcat cagcagtgaa
      841 gaacacaagc agctgatgct gttctaccac agaagacagg aggagctcaa gaaactggaa
      901 gagaatgacg atgactcctg tctgaactcc ccgtgggctg acaacacggc tttgaaaaga
      961 cattttcatg gcgtaaaaga cataaagtgg cggcccaggt gaagccaaca cttgactgtc
     1021 agaacctcaa cccaccaaat tcctaccttc ctggttttcc tttagtttga atttttgaaa
     1081 taagtcattc acagttttag aacttaataa atacacattc aaaagagaat gttttaggac
     1141 agctgtgtca catctaagga ctt
//
