LOCUS       NM_028120               3743 bp    mRNA    linear   ROD 05-JUN-2024
DEFINITION  Mus musculus centrosomal protein 89 (Cep89), transcript variant 1,
            mRNA.
ACCESSION   NM_028120 XM_912921
VERSION     NM_028120.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3743)
  AUTHORS   Shao,W., Yang,J., He,M., Yu,X.Y., Lee,C.H., Yang,Z., Joyner,A.L.,
            Anderson,K.V., Zhang,J., Tsou,M.B., Shi,H. and Shi,S.H.
  TITLE     Centrosome anchoring regulates progenitor properties and cortical
            formation
  JOURNAL   Nature 580 (7801), 106-112 (2020)
   PUBMED   32238932
REFERENCE   2  (bases 1 to 3743)
  AUTHORS   Ding,W., Wu,Q., Sun,L., Pan,N.C. and Wang,X.
  TITLE     Cenpj Regulates Cilia Disassembly and Neurogenesis in the
            Developing Mouse Cortex
  JOURNAL   J Neurosci 39 (11), 1994-2010 (2019)
   PUBMED   30626697
REFERENCE   3  (bases 1 to 3743)
  AUTHORS   Ye,X., Zeng,H., Ning,G., Reiter,J.F. and Liu,A.
  TITLE     C2cd3 is critical for centriolar distal appendage assembly and
            ciliary vesicle docking in mammals
  JOURNAL   Proc Natl Acad Sci U S A 111 (6), 2164-2169 (2014)
   PUBMED   24469809
REFERENCE   4  (bases 1 to 3743)
  AUTHORS   Sillibourne,J.E., Hurbain,I., Grand-Perret,T., Goud,B., Tran,P. and
            Bornens,M.
  TITLE     Primary ciliogenesis requires the distal appendage component Cep123
  JOURNAL   Biol Open 2 (6), 535-545 (2013)
   PUBMED   23789104
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 3743)
  AUTHORS   Suzuki,H., Fukunishi,Y., Kagawa,I., Saito,R., Oda,H., Endo,T.,
            Kondo,S., Bono,H., Okazaki,Y. and Hayashizaki,Y.
  TITLE     Protein-protein interaction panel using mouse full-length cDNAs
  JOURNAL   Genome Res 11 (10), 1758-1765 (2001)
   PUBMED   11591653
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK029107.1, AK012067.1 and AC151535.2.
            
            On Feb 10, 2018 this sequence version replaced NM_028120.2.
            
            Transcript Variant: This variant (1) represents the protein-coding
            variant.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK012067.1, AK029107.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-30                AK029107.1         2-31
            31-2597             AK012067.1         2-2568
            2598-3743           AC151535.2         101463-102608       c
FEATURES             Location/Qualifiers
     source          1..3743
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 21.37 cM"
     gene            1..3743
                     /gene="Cep89"
                     /gene_synonym="2610507L03Rik; Ccdc123"
                     /note="centrosomal protein 89"
                     /db_xref="GeneID:72140"
                     /db_xref="MGI:MGI:1919390"
     exon            1..144
                     /gene="Cep89"
                     /gene_synonym="2610507L03Rik; Ccdc123"
                     /inference="alignment:Splign:2.1.0"
     exon            145..251
                     /gene="Cep89"
                     /gene_synonym="2610507L03Rik; Ccdc123"
                     /inference="alignment:Splign:2.1.0"
     exon            252..410
                     /gene="Cep89"
                     /gene_synonym="2610507L03Rik; Ccdc123"
                     /inference="alignment:Splign:2.1.0"
     exon            411..588
                     /gene="Cep89"
                     /gene_synonym="2610507L03Rik; Ccdc123"
                     /inference="alignment:Splign:2.1.0"
     exon            589..700
                     /gene="Cep89"
                     /gene_synonym="2610507L03Rik; Ccdc123"
                     /inference="alignment:Splign:2.1.0"
     exon            701..729
                     /gene="Cep89"
                     /gene_synonym="2610507L03Rik; Ccdc123"
                     /inference="alignment:Splign:2.1.0"
     exon            730..772
                     /gene="Cep89"
                     /gene_synonym="2610507L03Rik; Ccdc123"
                     /inference="alignment:Splign:2.1.0"
     exon            773..991
                     /gene="Cep89"
                     /gene_synonym="2610507L03Rik; Ccdc123"
                     /inference="alignment:Splign:2.1.0"
     exon            992..1134
                     /gene="Cep89"
                     /gene_synonym="2610507L03Rik; Ccdc123"
                     /inference="alignment:Splign:2.1.0"
     exon            1135..1185
                     /gene="Cep89"
                     /gene_synonym="2610507L03Rik; Ccdc123"
                     /inference="alignment:Splign:2.1.0"
     exon            1186..1269
                     /gene="Cep89"
                     /gene_synonym="2610507L03Rik; Ccdc123"
                     /inference="alignment:Splign:2.1.0"
     exon            1270..1373
                     /gene="Cep89"
                     /gene_synonym="2610507L03Rik; Ccdc123"
                     /inference="alignment:Splign:2.1.0"
     exon            1374..1489
                     /gene="Cep89"
                     /gene_synonym="2610507L03Rik; Ccdc123"
                     /inference="alignment:Splign:2.1.0"
     exon            1490..1670
                     /gene="Cep89"
                     /gene_synonym="2610507L03Rik; Ccdc123"
                     /inference="alignment:Splign:2.1.0"
     exon            1671..1838
                     /gene="Cep89"
                     /gene_synonym="2610507L03Rik; Ccdc123"
                     /inference="alignment:Splign:2.1.0"
     exon            1839..1980
                     /gene="Cep89"
                     /gene_synonym="2610507L03Rik; Ccdc123"
                     /inference="alignment:Splign:2.1.0"
     exon            1981..2070
                     /gene="Cep89"
                     /gene_synonym="2610507L03Rik; Ccdc123"
                     /inference="alignment:Splign:2.1.0"
     exon            2071..2240
                     /gene="Cep89"
                     /gene_synonym="2610507L03Rik; Ccdc123"
                     /inference="alignment:Splign:2.1.0"
     exon            2241..3743
                     /gene="Cep89"
                     /gene_synonym="2610507L03Rik; Ccdc123"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2578..2583
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Cep89"
                     /gene_synonym="2610507L03Rik; Ccdc123"
                     /note="hexamer: AATAAA"
     polyA_site      2600
                     /gene="Cep89"
                     /gene_synonym="2610507L03Rik; Ccdc123"
                     /note="major polyA site"
     regulatory      3723..3728
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Cep89"
                     /gene_synonym="2610507L03Rik; Ccdc123"
                     /note="hexamer: ATTAAA"
     polyA_site      3743
                     /gene="Cep89"
                     /gene_synonym="2610507L03Rik; Ccdc123"
ORIGIN      
        1 gtccgcggga gctaggctgt ggggagctgt gcaggctgcg gggtctacct tccagctagt
       61 ccagcgcctg gcggctcaac ccgcagccct cagctctcag ccaggatgct cctcagcttc
      121 cgcaggaacc gccggagcca gttcaaccac atcatccatg gcttcctccc cgcagccagc
      181 atcgctccga agccagcggt gccacgcaca ccccctcctc ggagccccaa cccttctcca
      241 gagaggccca ggtctgctct ggctgcagcc atcctggcaa ccacgttgac tgggcagaca
      301 gttgccattc cccagcctcg ccagagatct cggtctgaga gtgatgcctc cgacattgaa
      361 aaggacagct tcatcaagcc ttacgccacc acttccgagc tgaggctgcg gcaaagctgg
      421 cagaatgagc cgagaaggac gtcattacca tcctttgaga tgttaggcta cggggaggat
      481 gaagatgctg aaacacaggt gtcaaccagc tgcagggagt cagagtccac ctggaaggat
      541 gtgggagatg gcagagatgc tacatacact gtgcctcaca gggaccaggt actgccatcc
      601 caaaagctgg tgagaaagga tgatgctcct caaccagact ggctttcaga ctcctcctcc
      661 tcctcctcct cctcaacacc acagcacact cagcagaaag atgttaaaca ctctgttctg
      721 aatctagagg gtgagaaagt ccggttgcat gaaaagcctc ctccctcccc agatgtagct
      781 ggtagaatac atcaaagata tacagaaata accaaagaaa agtttgcgga gttaaaagaa
      841 gaaactgtgc atctgtactc tgcaaaccaa gccctcagct gtgaactgag cgctctgaga
      901 caggcaatga aggacttaca gctgaagctc aagttggtgg aaaaagacaa caggaagctg
      961 aaggagacgg aaaaggcttc ctgtcaggaa ggagtcacac ctgaattgct ttgcctaagg
     1021 aagcaaagcc aagacctggt ggatgaaaac gaggggctga agatgattgt ccatcgattg
     1081 aacgtagaac tcagtcgcta ccaaacaaaa ttcaggcctt tgtctgagga agagagttcc
     1141 catatccaag gcctcccatc caagggcccc acaccaccct ggttggtgga tataaagtat
     1201 ctctcaccac tgttgctggc ttatgaagac agaatgaaag agaaggacaa actcagcacc
     1261 gccctggagg aggaaatgaa aacctttagg cttcgagttc aggaagtcgt gaaggaaaac
     1321 gaagccttgc accaagagtt aactaagaga agccccgtca ccgtagagga atggaggcag
     1381 cttcagactc aagcagagct ggttctagat gagaacaagc tgctgataga gcagttggag
     1441 attcagcaag caaaagccag ggacacccac caggcgcacc tccaggacgt ttctaagctg
     1501 actaaacaac ttgtgctcct ggaagcaaag actcagggcc aggaaaagca gctcgtggaa
     1561 agcacggagc agctggagag cttgcaggcc aaatgcacag agctcaaggc acagctggat
     1621 agcaagatcg cagtggacgt ccatacatca attgtcaatg aactaaaaag ccagttgcaa
     1681 aaggaagaag agaaagacag tgctgagatg gaggagctga tggcaaagct gacggcccta
     1741 caggtgcaga agaagagcct gcttctggag aagagcagct gggccaccag gaacagagcg
     1801 ctagaggccg agctggagcg cacgcgcaag gccaacaggc gataccaaaa gagaattgat
     1861 gtcctcagaa agcaagtaga aaaggccatg gggaaggaga tgtctgctca ccagtacctg
     1921 gcaaacctgg tgggcttggc agagactgtc accaaggaac gagacagtct taagtatttg
     1981 gctcagtgtt tagagagcga gaagcatggg gtcctcaaca aaatcctgaa aggcaacatt
     2041 cgcctgggca agctggagga gagggtaaag gggtacaaga agcaggcagc actgaagctg
     2101 ggggatatcc atcaccgcct gaaggaacag caggaggact ttgccggcaa agcagctcag
     2161 taccagaagg aggtgaagca cctacatcgg atgctgcagg aaaagcagga ggtcctggat
     2221 gaggcgctgc agcagaaaag aaatatggaa ggtgagcttg aaatggtcct ggagtccact
     2281 gccaaggaga acaggaggat gcggagcctt ctccaggcca ccctggagag aagaagcaca
     2341 cagcacgtca cagctcctcc ggacacttgc ttgagacgct cctctcaggg agacctactg
     2401 attggccatg atttcagcta tggtgatgtg cagcttctgg ctaccaccaa ccgccagagt
     2461 ctgggggaat ctatggcgta gatctcctgt ctgaggtgtc tacttcctcc tctcctcagg
     2521 agggccagtg tgacaagaag gcccgtggaa gccactgagt gtcataggca agggagaaat
     2581 aaaccagccc cggcatcaca cacttttgca tgtttatttc agtttctttc tttctctctc
     2641 tctctctctc tctctctctc tctctccccc ccccccttat gtgttgaacc taagggtctg
     2701 cacatgtgga acacagaggt tactgcaccg caccacagct ctccttttct gaggcagggt
     2761 ctcgctgagc aggccaggct ggccttgagt gtttgatctt catgcctttc cctcctgagt
     2821 gacctaccac acgcctctcc atattttcct ttaatgactt gctacatgtt tagtgagatg
     2881 cagcctctgg tcacattgcc ctgaggtggc tctgtgacac ccatcatctc agcactccta
     2941 gctaggcagc tgagaaaggc ctggaagaaa tggagatgct gtgtggtacc tatcaaccga
     3001 gcagtaagta agtgacaggc atgagcagaa agactcagcg ggggtttaag ctatgtgaca
     3061 tctccctagg aggtgatcta gcagataact ttgatgtctt gtcaaagggc tttacactca
     3121 ctgtcccaaa atctgaagac agtaaggcag tgtcctgcag ggcaggggct tctccactat
     3181 tgtcctgacc cagagaatgt ctttgtccac tctgtaagat cactcttcta ccctgtgctg
     3241 ctgcttcata agacattgaa gtgggctatc ctcagggcca ccttgtgacc aaggaagggg
     3301 tccaggtggt acagttcctg tgtgctgtcc cacttcatgc tagatcttac aggaaacagg
     3361 ccgtgggctg agcccccagc acacaggtgg gcaaacaaag cagagaatgg gaggctgtag
     3421 aggggcagac aacctgcagg actggagaga ccataggcac ttcatcgagg gagggacagg
     3481 ggctgctgca gaagaagcag acacaggcac ccagggtcag caccagggtc aacgtgtgct
     3541 ttgtggaggt gagctgggac tctggcaagg gtcttgtcca tttcatccta gtgacctcca
     3601 ggaaagcatg cttgtgtttc tgggtcctga tgcaccactg caagacacag caggtgacct
     3661 cggttttcat gttgacccac gcagaagagt gtggggatca gaagtgacat cttacctatg
     3721 caattaaaga agtgacaagc ctg
//
