LOCUS       NM_001081373            5513 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus centrosomal protein 164 (Cep164), mRNA.
ACCESSION   NM_001081373 NM_145992 NM_172531 XM_901585
VERSION     NM_001081373.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 5513)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 5513)
  AUTHORS   Reed,M., Takemaru,K.I., Ying,G., Frederick,J.M. and Baehr,W.
  TITLE     Deletion of CEP164 in mouse photoreceptors post-ciliogenesis
            interrupts ciliary intraflagellar transport (IFT)
  JOURNAL   PLoS Genet 18 (9), e1010154 (2022)
   PUBMED   36074756
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 5513)
  AUTHORS   Phan,T.P., Boatwright,C.A., Drown,C.G., Skinner,M.W., Strong,M.A.,
            Jordan,P.W. and Holland,A.J.
  TITLE     Upstream open reading frames control PLK4 translation and centriole
            duplication in primordial germ cells
  JOURNAL   Genes Dev 36 (11-12), 718-736 (2022)
   PUBMED   35772791
REFERENCE   4  (bases 1 to 5513)
  AUTHORS   Han,X., Shen,X., Wang,M., Wang,X., Jian,Y., Yang,C. and Guo,W.
  TITLE     Loss of RNA-Binding Protein HuR Leads to Defective Ependymal Cells
            and Hydrocephalus
  JOURNAL   J Neurosci 42 (2), 202-219 (2022)
   PUBMED   34815315
REFERENCE   5  (bases 1 to 5513)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   6  (bases 1 to 5513)
  AUTHORS   Kobayashi,T., Kim,S., Lin,Y.C., Inoue,T. and Dynlacht,B.D.
  TITLE     The CP110-interacting proteins Talpid3 and Cep290 play overlapping
            and distinct roles in cilia assembly
  JOURNAL   J Cell Biol 204 (2), 215-229 (2014)
   PUBMED   24421332
REFERENCE   7  (bases 1 to 5513)
  AUTHORS   Wang,C., Low,W.C., Liu,A. and Wang,B.
  TITLE     Centrosomal protein DZIP1 regulates Hedgehog signaling by promoting
            cytoplasmic retention of transcription factor GLI3 and affecting
            ciliogenesis
  JOURNAL   J Biol Chem 288 (41), 29518-29529 (2013)
   PUBMED   23955340
REFERENCE   8  (bases 1 to 5513)
  AUTHORS   Zhang,Q., Liu,Q., Austin,C., Drummond,I. and Pierce,E.A.
  TITLE     Knockdown of ttc26 disrupts ciliogenesis of the photoreceptor cells
            and the pronephros in zebrafish
  JOURNAL   Mol Biol Cell 23 (16), 3069-3078 (2012)
   PUBMED   22718903
REFERENCE   9  (bases 1 to 5513)
  AUTHORS   Kinzel,D., Boldt,K., Davis,E.E., Burtscher,I., Trumbach,D.,
            Diplas,B., Attie-Bitach,T., Wurst,W., Katsanis,N., Ueffing,M. and
            Lickert,H.
  TITLE     Pitchfork regulates primary cilia disassembly and left-right
            asymmetry
  JOURNAL   Dev Cell 19 (1), 66-77 (2010)
   PUBMED   20643351
REFERENCE   10 (bases 1 to 5513)
  AUTHORS   Xie,Z., Moy,L.Y., Sanada,K., Zhou,Y., Buchman,J.J. and Tsai,L.H.
  TITLE     Cep120 and TACCs control interkinetic nuclear migration and the
            neural progenitor pool
  JOURNAL   Neuron 56 (1), 79-93 (2007)
   PUBMED   17920017
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC126804.3.
            
            On or before Jun 21, 2018 this sequence version replaced
            NM_172531.2, NM_001081373.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR9219381.254436.1,
                                           SRR9219380.16779.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-162               AC126804.3         136657-136818       c
            163-281             AC126804.3         131801-131919       c
            282-393             AC126804.3         126133-126244       c
            394-598             AC126804.3         117859-118063       c
            599-754             AC126804.3         111328-111483       c
            755-889             AC126804.3         110798-110932       c
            890-967             AC126804.3         109620-109697       c
            968-1345            AC126804.3         102207-102584       c
            1346-1426           AC126804.3         101087-101167       c
            1427-1510           AC126804.3         99238-99321         c
            1511-1596           AC126804.3         95581-95666         c
            1597-1740           AC126804.3         93933-94076         c
            1741-1887           AC126804.3         87845-87991         c
            1888-2116           AC126804.3         87537-87765         c
            2117-2194           AC126804.3         87298-87375         c
            2195-2326           AC126804.3         86952-87083         c
            2327-2449           AC126804.3         86563-86685         c
            2450-2593           AC126804.3         84938-85081         c
            2594-2677           AC126804.3         84020-84103         c
            2678-2746           AC126804.3         83832-83900         c
            2747-2922           AC126804.3         83347-83522         c
            2923-3046           AC126804.3         82939-83062         c
            3047-3114           AC126804.3         82597-82664         c
            3115-3322           AC126804.3         81973-82180         c
            3323-3430           AC126804.3         80437-80544         c
            3431-3542           AC126804.3         79686-79797         c
            3543-3905           AC126804.3         78850-79212         c
            3906-3972           AC126804.3         77564-77630         c
            3973-4095           AC126804.3         76676-76798         c
            4096-5513           AC126804.3         75101-76518         c
FEATURES             Location/Qualifiers
     source          1..5513
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 25.1 cM"
     gene            1..5513
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /note="centrosomal protein 164"
                     /db_xref="GeneID:214552"
                     /db_xref="MGI:MGI:2384878"
     exon            1..162
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            163..281
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            282..393
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            394..598
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            599..754
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            755..889
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            890..967
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            968..1345
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            1346..1426
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            1427..1510
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            1511..1596
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            1597..1740
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            1741..1887
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            1888..2116
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            2117..2194
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            2195..2326
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            2327..2449
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            2450..2593
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            2594..2677
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            2678..2746
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            2747..2922
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            2923..3046
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            3047..3114
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            3115..3322
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            3323..3430
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            3431..3542
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            3543..3905
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            3906..3972
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            3973..4095
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     exon            4096..5513
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /inference="alignment:Splign:2.1.0"
     regulatory      5306..5311
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /note="hexamer: AATAAA"
     polyA_site      5336
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /note="major polyA site"
     regulatory      5484..5489
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
                     /note="hexamer: ATTAAA"
     polyA_site      5508
                     /gene="Cep164"
                     /gene_synonym="D030051D21"
ORIGIN      
        1 agtgcctttc cggaagtggt tgctggtcgc tgcagggcaa caccccggcg tccctggaag
       61 cggggagccg gacaccccgg cgtccctgga aggtgggggg ccggggtggt gctggggagg
      121 aggcgcagag ccatcctccc ggaaaccccg gatcggggac agggtctctg ggatcaagat
      181 agctacgata gactgaacca tggctagacg gcccatcctt ttaggtgacc agctggtcct
      241 ggaggaagat tctgatgaga cctacgttcc cagtgagcaa gaaatccttg actttgccag
      301 agtgattggt attgacccta tcaaggaacc agaactgatg tggctggcga gagagggtat
      361 tgaggctcca ttgcccaagg gctggaaacc atgccagaac atcacaggtg atctttacta
      421 tttcaacttt gacacggggc agtccatctg ggaccatcca tgtgacgagc actatcgaaa
      481 gttggtcatc caggagaggg agaggtggtc agctcccggg gccattaaga agaaagacaa
      541 gaaaaagaaa aaggaaaaga aaaacaagaa ggacaaagag acctccaaaa gtcctctggt
      601 cctgggttcc cccttagctc tagtccaggc ccctctttgg ggcctggctc ccttacgagg
      661 ccttggggat gccccaccct ctgctcttcg tgggtcgcag agcgtgagct tgggcagctc
      721 agcggattct gggcatcttg gggagcccac gctgcctcca cagggtctca aggctgctgc
      781 ttgtgcaaag ggtctcttgg cttctgtcca tgagggcaag aatgctctca gcctcttgac
      841 tttaggggaa gagaccaacg aggaggatga agaggagagt gacaaccaga gtgtccggag
      901 ctccagtgaa cttctcaaga acctacatct ggaccttggt gccctgggag gtaactttga
      961 gtacgaggag tctccaagaa ccagccagcc agacaagaaa gatgtttctc tggactcaga
     1021 tgccgatcgc cccccaactc ccggcaagct gttcagccag ggtgcagaca gtagtgtggc
     1081 cagtgccaat ggcagcaagt cccaaggaag aggggcaagt ccctggaacc cacagaaaga
     1141 aaacgagaat agtgatccca aggcttcttc aagtcagatg gctcccgagt tggaccccgg
     1201 gggtgatcag ccttccaggg cctctaaaaa gcagcaggca gaggacccag tgcaggcagg
     1261 aaaggaggga gagtgcagga gggagagtgc agccaaggag ccaaaggagg cttctgcctt
     1321 ggagaacacc tcagatgtca gtgaggagtc agagatccac ggacacttga aggacgcccg
     1381 gcactcaggg tccgaagctt ctggccctaa gtctttcctg ggcctggact tgggctttcg
     1441 cagccgcatc tcggagcatc tgctggatgg tgacacactt tctccagtct tgggtggagg
     1501 ccactgggag gcccaggggt tagaccaaga agaacaagat gacagcaaat ccagcatcgc
     1561 tgagccacag agcaagcata cccaaggctc cgagagggaa catctccaga gtagccttca
     1621 cagccaggct actgaggaag ggcctttgca gaccctggag gggcagcctg agtggaagga
     1681 agcagaggga cctgggaagg actctgtagc cagccccgcc ccactgtccc tcctccagag
     1741 cctcctgaaa gcacagctac agaaagccac cgctgaggag aaggagaagg aagaggagac
     1801 taagataaga gaggaggaaa gccggaggct ggtctgcctc cgggcccagg tgcagtccag
     1861 gactgaggct tttgagaacc aaattagaac cgagcaacag gctgccctac agaggcttcg
     1921 agaagaggcc gagactctcc agaaagctga aagagccagc ttggaacaga aaagcaggag
     1981 ggcactggag cagctgaggg agcagctgga ggccgaggag aggagtgccc aggctgcctt
     2041 gagggcagag aaggaggcgg agaaggaggc cgctctgctg cagctgaggg agcagctgga
     2101 aggggagagg aaggaagcag tggcaggcct agagaagaag cacagcgctg agctggaaca
     2161 gctctgttcc tcactggaag ccaaacacca ggaggtgatc tccagcctcc agaagaagat
     2221 agagggagct cagcagaaag aggaggccca attacaggag agccttgggt gggccgagca
     2281 gagagctcac cagaaggttc accaggtgac cgagtatgaa caggagctca gcagcctcct
     2341 tcgagacaag cgccaggagg tagagaggga acacgagcgg aagatggaca agatgaagga
     2401 ggagcactgg caagagatgg ctgacgccag agagcgatac gaagccgagg agagaaagca
     2461 gcgggctgac ctcctggggc acctgactgg agagctggag cgcctgcgaa gggcccacga
     2521 gcgggagtta gagagtatga ggcaggagca ggaccagcag cttgaagacc tgaggcgtcg
     2581 acaccgcgac catgaaagga aattacaaga cttagaggtg gaactctcgt ccagaactaa
     2641 agatgtcaag gccagactag ctcagctgaa tgttcaggag gagaacatac ggaaagagaa
     2701 gcagctgctc ctggatgcgc agaggcaggc tgctctggag agggaggaag ccacagccac
     2761 ccaccagcac ctggaagaag ccaagaaaga gcacacacac ctgctggaga cgaagcagca
     2821 gctgcgaagg accatcgatg acctgagggt ccggcgggtg gagctggagt cccaagtgga
     2881 cctgttgcag gcgcagagtc agagattgca gaagcacctg agcagcctag aggccgaagt
     2941 acaaaggaag caggatgtct tgaaagagat ggcagctgag atgaatgctt ccccacaccc
     3001 ggagccaggg ctccacattg aggacctgag gaaatccctt gacacaaata agaaccaaga
     3061 ggtgtcctct tctctctccc tgagtaagga ggagatcgac ctgtctatgg agagtgtccg
     3121 acagttcctc tctgctgagg gtgtagctgt gcgcaacgct aaggagttcc tggtgcgcca
     3181 gacacgctcc atgcggaggc gacagacagc tctgaaagcc gcccagcagc actggcgcca
     3241 tgagctggcc agtgcccagg aggtagacga agacctgcca ggcaccgagg tcctgggaaa
     3301 catgcgcaag aacttgaatg aggagaccag gcacctggat gagatgaagt cagccatgcg
     3361 caaaggccat gacttgttga agaagaaaga ggagaagctg atccaactgg aatcttctct
     3421 tcaggaggag gtctctgacg aggacactct gaaaggatcc tctatcaaga aggtgacctt
     3481 tgatctcagt gacatggacg atttgagcag tgagagtctt gagtccagcc ccgtgctgca
     3541 catcaccccg accccgacct ctgctgatcc caacaagatc cattacctga gcagctccct
     3601 tcagcgaatc agcagtgagc taaacggcgt gctgaatgtg ctgggaagcc tcaactccca
     3661 gccgccgccc cagggcctcg gcagccagcc cccgcctcca ctcttcacct cctcacttcg
     3721 gtcctccaag aatgtccttg accctgccta ctcctcccag gccaagctct cctccttatc
     3781 ttccatcaca cccatgtcca cccagtgggc ctgggaccca gggcagggca ccaagctgac
     3841 ctcttcctcc tcctctcaaa ctgtggatga tttcctgctg gagaagtggc gcaagtattt
     3901 tccctctggc atcccgttgc tcagtggctc tcctccccca ccggagaaca agctgggtta
     3961 tgtgtctgta agtgagcagc tccacttcct gcagcgctcc caccctcgag tccccaggac
     4021 ggatggtgtc agcattcaga gcttgatcga ttccaaccgg aagtggctgg aacatttccg
     4081 gaacgacccc aaggtacagc ttttctcctc ggcgcccaaa gcaacaacca catcgaactt
     4141 atcgaacctc ctgcagctgg gcctggacga gaacaacaga ctgaatgtgt ttcattactg
     4201 aaccccgtgt ggggcggggc agggcggcct cctcctctat tacaagtgcc tgaggagccg
     4261 ccaacatttt atttctctca tcaagcatgt cctccgttgt gaaccccacc gaggacttag
     4321 aggaaccacc gggttagata ggtggagagt acggctgtag acggccacgc acgcttcaac
     4381 catggactgt cctgagcaga aacatgtgga catatgcgag cttctgcacc aaagtggcac
     4441 tgagatgtgg gctgctgaag acttcagggg tgtggacacc ttagttaaag cgactgctat
     4501 gggaggctta gggatcctcc ttggaggttg gccccctgct gaggatgtgg tcctttattc
     4561 acatggcctc ctagcatggc atgccctggc actttggctg tgctgggtct gtgccccttt
     4621 cggatacctc agccccgaca ggatcatacc cgtccctctc tttttgcctt tttttttctt
     4681 tgtaaatgtc ttctgactgt cacaagtttg ggctcagctg cctgagcccg gctggatgtt
     4741 gctagagggg ccccgaggga tgttctgtct ccttcccctc ggctggcacc gtgatttcct
     4801 cacgattctc aggagcagcc ctctcccccc ttagggtgct ctgtggagct cttccttgcc
     4861 ctcaggtttc aagcacctat ctttccagga agccaaaaaa gccataggga aagaggggaa
     4921 tgccttctgc cccatcttga tatttctctt ctttaactcg agtgtgtcta tgagccctat
     4981 ttccatctgt ccttctatct gggccgcccc tagcccagtc caactagcaa ctctgtccag
     5041 agctcagtgg atggaactga ttccagcctg gcaccagcag ggaccatctt gggtcaggtg
     5101 cttctggcta gtgcttctgg ctcaagcctc ctcggcccaa cttcccctca gcgggctctg
     5161 caggagctgc aggtgatgct ctcagcatct gtctccttgt ttaaacaaaa tgccctcatt
     5221 tttcttgtct tgagaagctg cgggctgcct ctacccccgc agcccacagg gtctcaccga
     5281 tttattgttc gtttctttgc tgtggaataa acctcgagca gccagttggc tttttaccct
     5341 ttagatattt tttagtcatc ggctgaccac acacagataa agtccgtttt gttacttctt
     5401 ccactctgtg tgccttgaga accgctcatg tggtacaacc aattctggtg acaatcctgt
     5461 gatttttttt tttttttgca cctattaaat ctctgtaagt caattttcta tga
//
