LOCUS       NM_001347612             969 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus centromere protein X (Cenpx), transcript variant 3,
            mRNA.
ACCESSION   NM_001347612 XM_017314405
VERSION     NM_001347612.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 969)
  AUTHORS   Tian T, Chen L, Dou Z, Yang Z, Gao X, Yuan X, Wang C, Liu R, Shen
            Z, Gui P, Teng M, Meng X, Hill DL, Li L, Zhang X, Liu X, Sun L,
            Zang J and Yao X.
  TITLE     Structural insights into human CCAN complex assembled onto DNA
  JOURNAL   Cell Discov 8 (1), 90 (2022)
   PUBMED   36085283
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 969)
  AUTHORS   Du X, Dong Y, Shi H, Li J, Kong S, Shi D, Sun LV, Xu T, Deng K and
            Tao W.
  TITLE     Mst1 and mst2 are essential regulators of trophoblast
            differentiation and placenta morphogenesis
  JOURNAL   PLoS One 9 (3), e90701 (2014)
   PUBMED   24595170
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 969)
  AUTHORS   St-Pierre B, Jiang Z, Egan SE and Zacksenhaus E.
  TITLE     High expression during neurogenesis but not mammogenesis of a
            murine homologue of the Deleted in Breast Cancer2/Rhobtb2 tumor
            suppressor
  JOURNAL   Gene Expr Patterns 5 (2), 245-251 (2004)
   PUBMED   15567721
REFERENCE   4  (bases 1 to 969)
  AUTHORS   St-Pierre B, Flock G, Zacksenhaus E and Egan SE.
  TITLE     Stra13 homodimers repress transcription through class B E-box
            elements
  JOURNAL   J Biol Chem 277 (48), 46544-46551 (2002)
   PUBMED   12297495
REFERENCE   5  (bases 1 to 969)
  AUTHORS   Nelson PS, Pritchard C, Abbott D and Clegg N.
  TITLE     The human (PEDB) and mouse (mPEDB) Prostate Expression Databases
  JOURNAL   Nucleic Acids Res 30 (1), 218-220 (2002)
   PUBMED   11752298
REFERENCE   6  (bases 1 to 969)
  AUTHORS   Scott LM, Mueller L and Collins SJ.
  TITLE     E3, a hematopoietic-specific transcript directly regulated by the
            retinoic acid receptor alpha
  JOURNAL   Blood 88 (7), 2517-2530 (1996)
   PUBMED   8839844
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL663030.12, BC052335.1 and CA320983.1.
            
            [WARNING] On Nov 18, 2023 this sequence was replaced by
            NM_001347612.2.
            
            On Dec 2, 2016 this sequence version replaced XM_017314405.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC052335.1, U95005.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849380, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-76                AL663030.12        169547-169622       c
            77-949              BC052335.1         13-885
            950-969             CA320983.1         575-594
FEATURES             Location/Qualifiers
     source          1..969
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 84.45 cM"
     gene            1..969
                     /gene="Cenpx"
                     /gene_synonym="Stra13"
                     /note="centromere protein X"
                     /db_xref="GeneID:20892"
                     /db_xref="MGI:MGI:894324"
     exon            1..116
                     /gene="Cenpx"
                     /gene_synonym="Stra13"
                     /inference="alignment:Splign:2.1.0"
     exon            117..389
                     /gene="Cenpx"
                     /gene_synonym="Stra13"
                     /inference="alignment:Splign:2.1.0"
     CDS             255..599
                     /gene="Cenpx"
                     /gene_synonym="Stra13"
                     /note="isoform 3 is encoded by transcript variant 3;
                     CENP-X; immediate-early-response protein D9; retinoic
                     acid-inducible gene D9 protein; stimulated by retinoic
                     acid gene 13 protein homolog; FANCM-interacting histone
                     fold protein 2; Fanconi anemia-associated polypeptide of
                     10 kDa; stimulated by retinoic acid 13"
                     /codon_start=1
                     /product="centromere protein X isoform 3"
                     /protein_id="NP_001334541.1"
                     /db_xref="CCDS:CCDS83947.1"
                     /db_xref="GeneID:20892"
                     /db_xref="MGI:MGI:894324"
                     /translation="MAHLWCSHGIPRPLDSPSHLHLTNYHQPFSSQAIPDAWPICRHH
                     LELVSRLLHLHFRDCKTKVSGDALQLMAEFLRIFVLEAAVRGVWQAQAEDLDVVEVDQ
                     LEKVLPQLLLDF"
     exon            390..441
                     /gene="Cenpx"
                     /gene_synonym="Stra13"
                     /inference="alignment:Splign:2.1.0"
     exon            442..495
                     /gene="Cenpx"
                     /gene_synonym="Stra13"
                     /inference="alignment:Splign:2.1.0"
     exon            496..584
                     /gene="Cenpx"
                     /gene_synonym="Stra13"
                     /inference="alignment:Splign:2.1.0"
     exon            585..950
                     /gene="Cenpx"
                     /gene_synonym="Stra13"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggattggagg cgggacctca gggtcgcgtt ccacgttcat tggttgggat gtgggagggt
       61 tccggagagt gcacatcgag actgtggcca tggagggaaa cagtggcttc cggaaggcca
      121 tccacttcga gggtcgtggg tgcctgtcgc tgcctacctt ttgcctttcc ctggtcgttc
      181 cccattctgt tctggactag gcaaacttga gtggtctcgg cttcacacac tgcacagatg
      241 ctcgggggct cctcatggct cacctttggt gctctcacgg gattcctagg cctctggatt
      301 ctccctctca tctccacctc acaaactacc accaaccttt cagttctcaa gccattccag
      361 atgcctggcc aatctgccgc caccacctgg aactggtgag cagactactc catttgcact
      421 tcagggattg caagaccaaa gtcagcgggg atgcactgca gctcatggcg gagttcctga
      481 ggatcttcgt actagaggct gctgtccgtg gggtctggca ggcccaggca gaagacctgg
      541 atgttgtgga agtggatcag ctggagaaag tgctccctca gctgctcctg gacttctaga
      601 gttccctcct gtggcctgca aggtctagtg aatccacacc agcatcaact cctgagctct
      661 ccagcttcag gaggatggga agatcccagc agctgttacc tccaagagtc cttgcaagac
      721 aggtgcaggg aaaggtgaac cagcctgcct ccagacacag ccctcctccc gcccccagca
      781 gccttgcatt ataaataaac cagctgctgg cagtgcctcc ttcttgccac cctacatcaa
      841 agctgctgtg tagcctttta accacctgac ccccaccccc aggatgcctc cctgagctgt
      901 aaatttgttc ttacaaagca acatcaataa atcaacacca tctctctgag aaaaaaaaaa
      961 aaaaaaaaa
//
