LOCUS       XM_017320638            3883 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus centromere protein C1 (Cenpc1), transcript
            variant X6, mRNA.
ACCESSION   XM_017320638
VERSION     XM_017320638.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000071.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_017320638.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3883
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="5"
     gene            1..3883
                     /gene="Cenpc1"
                     /gene_synonym="CENP-C; Cenpc"
                     /note="centromere protein C1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 3 ESTs, 357 long SRA reads, 6 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 14 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:12617"
                     /db_xref="MGI:MGI:99700"
     CDS             1722..3650
                     /gene="Cenpc1"
                     /gene_synonym="CENP-C; Cenpc"
                     /codon_start=1
                     /product="centromere protein C isoform X5"
                     /protein_id="XP_017176127.1"
                     /db_xref="GeneID:12617"
                     /db_xref="MGI:MGI:99700"
                     /translation="MKLLEDEFIIDRSDRSFSSRLWVMIPSKDRHLSAHKPSPENTAL
                     LQGKKSREKSHSLSAMTFARNTQSDKAHPIEEAQLSVEENPATTCTDELENDCRSPEN
                     KMQSETAKTPPAWERTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQDKLQINSK
                     RNMKDCEEVRNEPNPKKQKPALENKKKTNSTQTNKEKSGKKFFSGGSKNKFVPKKVTL
                     TSRRSCRISQRPSEWWRVKSDESSVDRNPSKENNSPVVYPNKKKQTKRNHVSKRAGKK
                     PGSSKRQKTEMSPRVQKSLNVKDSGGTVSGHDDTSRSQRKPLKIIEADPTQKSLAISR
                     PKRGCKYRNNVMTSPNVHLKSHTEEYTSKTQMESASNSEMSKRSVWEESGPSRFKNYE
                     MPGSSNSEMGDEQDQKSLHFTTRSFNMVPDKKLHHKLVLPSNSPNVRRSNRIRLKPLE
                     YWRGERVDYQESSSGQLVLEIISPSSVPTKIKAQRNLGKVNKKVTKKPTHLNSHEKAK
                     MELPLDMRLGDPFQATLAKDPETAELVPMDLIRPRDTYRFFVEQHGLKVFKTLDTIYF
                     STGKLVLGPYEEKGKQHVGQDILVFYVNFGDLLCTLHETPYKLTTGDSFYVPSGNHYN
                     IKNLLNVESSLLFTQIKR"
ORIGIN      
        1 atcgaacttt gctcctttaa aagtgcagca agcgctcttg accactgagc catcgctcca
       61 tccctgcaga ctctctctct tttctttcct tccttctgta tgtatgtatg tatgtatgta
      121 tgtatgtatt tatggcattc tgtctcctaa ggaaatagag cagctacagg ctgcgaccta
      181 gagtcacgtg gacaggacaa aatacacatc ggtgtatttt ccttgttttc caattggggt
      241 cattacctta attttcgcat aagacagaag cagtcacttt ctcttaaaaa cattatgttc
      301 gttctactga tatgcatata taatttatgc ctttgcttca taaataattt ttaaatactt
      361 gaaaaaagaa tagcattact attttcagag atactgtata gatgggcggg ttgcagctga
      421 cgaatctgcg tagtgtactc tgctcaaaac gccagcaatt tctacctgta atccttttta
      481 agtattacct attaatccgt agtagaactg ctgggatgta ttatacattt atctcaagga
      541 gcacaggtgg tgctcaacac ctgctttcta aatacgagca gtcatagacg caacaaactg
      601 tctgaagaaa gtagaacagg agagtccaca caaagcccgg acaagtcgac cggcgagggg
      661 agtggcgaag ggtgagaggc gtggcgaccg gcgaggggag tggcgaaggg tgagaggcgt
      721 ggcgactggt gaaaggcgtg gcgacgggtg agaggcgggg cgatgagtgg gaggttgaga
      781 cgcgggcgga agagcaaggc gcgctgggca ggagggcggg gcgaactgag aaaggcgggt
      841 tgataggtga gtaacaggcg aatgggcggg aacaagagcc ggagtcttta aaaaacgcca
      901 attaacggcc ggctaagcta ggcttgtgcg caggcgtggc tcgtttgact tttattcatt
      961 tatttttctt ggtggctgct gtttatttac ggctgagtgt taagtgcggg tcgcgcagct
     1021 ctggggacgc ctccgtccgc aatcttactc taaccctcct ggaaccctgg ccggcttggg
     1081 tttccctctc aggcctccgt ttgacctagt gggccggaac catggcctcg ttccatctgg
     1141 atcatctaaa gaactaccac agaagatatt gccggtcttc cagattttac agagtcattg
     1201 acttcttcaa cacaaaaaaa gaaagccaat tatagtcaat catcaagcaa aaagttcagg
     1261 ctaatgaagt tcaccatggt gcgtctgatg aattggactt atgtgttggc tcccctgtgg
     1321 ttctcctgga tgcaaacgtc aacacgttac agaaagccgc ttcacctgcc ggccaaaaga
     1381 gagtggcttc tgtctcaagg agtccagtag ataggcaggc ttcaaataaa aacatttctt
     1441 ttaaaaccag gaaaaggtta aactttgaag ataaagttac tttgagcaca gcagaaacag
     1501 agaacagtgt gttacaagta gaggataact tatccaaggg acaagaaggg acatcatcag
     1561 aaatcactca gaaaagagac gatctgagtt ctgatgtcca atcacgttct aagaagaatt
     1621 tttcggagtt gtttttagag actgtcaaga ggaaaagtaa atccagttct gtggtcaggc
     1681 acacagcagc agttccattt tctccgcctc ctccaagtga catgaaatta ttagaagatg
     1741 aatttattat tgatcggtca gatagaagtt tttcaagtcg actttgggtg atgataccaa
     1801 gcaaagacag gcatctgagc gcccacaagc catctcctga aaacactgca ctgcttcaag
     1861 gtaagaagtc aagagagaaa tctcatagtt tatctgcaat gacgtttgca agaaacacac
     1921 agtctgataa ggctcaccca atagaggaag ctcagctctc tgttgaagaa aacccggcaa
     1981 ctacttgtac agatgagttg gaaaatgatt gtcgatctcc tgaaaataaa atgcaatctg
     2041 agactgccaa aaccccaccc gcatgggaaa ggactacgaa acagagccag aggagagtgt
     2101 ctaagcctaa agcagctgaa gagctcagga agggacagag tagctgggaa aatagcaatg
     2161 tgtcaaacac tggccaagac aagctacaga tcaactcgaa aagaaatatg aaggactgtg
     2221 aagaggtgag gaatgagcct aatcccaaga aacagaagcc agctcttgaa aataagaaaa
     2281 aaaccaatag cacccaaacc aataaggaaa aatctggaaa gaaatttttt tctggtgggt
     2341 ccaagaacaa atttgttccc aaaaaagtaa ctttgacttc caggagaagt tgtagaattt
     2401 ctcagcgtcc atctgagtgg tggagggtaa aatcagatga aagttctgtt gatagaaatc
     2461 cttcaaaaga aaataactca ccagtggtat atcccaataa aaagaagcag actaagagaa
     2521 atcatgtatc taagagggct gggaagaaac ctggttcatc aaaaagacag aagacagaga
     2581 tgagcccaag agtacagaag tctttaaatg taaaggattc tggaggaact gttagtggcc
     2641 atgatgacac ttctcgttcc cagaggaagc cattgaaaat cattgaggca gacccaactc
     2701 agaagagcct tgctatttct cgacctaaaa gaggctgtaa gtatcgaaac aatgttatga
     2761 catcaccgaa tgttcattta aagtctcata ctgaggaata tacaagcaag acacaaatgg
     2821 agtctgcttc caattcagaa atgtctaaac gttcagtgtg ggaagaaagt ggaccttcca
     2881 ggttcaagaa ttatgaaatg ccagggagca gtaattctga gatgggtgat gaacaggacc
     2941 agaagagttt gcattttaca acaagaagtt ttaatatggt accagataaa aaattacatc
     3001 acaaattagt actgccctcc aactcaccaa atgttcgtcg atctaataga atacgtttga
     3061 aacctctgga gtattggcga ggggaacggg tagattatca agaaagttcg tcgggacaac
     3121 ttgtgcttga aataatatcc ccatcttcag tacccacgaa aataaaggca caaagaaacc
     3181 tcggcaaagt caacaaaaaa gttaccaaga agccgaccca tctcaatagc catgaaaagg
     3241 ctaagatgga gctgcctctg gatatgcgtc tgggagatcc ctttcaggca acattggcga
     3301 aggacccaga aaccgcagag cttgtcccca tggatcttat aagaccacga gatacatacc
     3361 gcttttttgt tgagcaacat ggtttgaaag tttttaaaac attggataca atatattttt
     3421 ctactggaaa attggtttta ggaccttatg aagagaaagg aaaacagcat gttggccaag
     3481 atatattggt tttttatgtt aactttggtg accttttatg tacattacat gaaacacctt
     3541 ataagttaac tactggggat tcattctatg ttccttcagg taatcattac aacattaaaa
     3601 acctcttgaa tgtggaaagt agtcttcttt ttactcaaat aaaaaggtga aataaatgtg
     3661 tatgtatata aaatacgttg tttatatgta cattttaata actgattatt ttaaagtaaa
     3721 atttttgttt agttttgcat tagttaatca tttcgtactc cttgttaaac atttcataat
     3781 cttgtatgta tcttttgatt tttccttgag tgtaaatact gtgtttagtg atgactattt
     3841 tgttggtatt gctttcataa tattaaaaat taaaaaacac aaa
//
