LOCUS       NM_028171                946 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus CEA cell adhesion molecule 13 (Ceacam13), transcript
            variant 2, mRNA.
ACCESSION   NM_028171
VERSION     NM_028171.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 946)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 946)
  AUTHORS   Zebhauser,R., Kammerer,R., Eisenried,A., McLellan,A., Moore,T. and
            Zimmermann,W.
  TITLE     Identification of a novel group of evolutionarily conserved members
            within the rapidly diverging murine Cea family
  JOURNAL   Genomics 86 (5), 566-580 (2005)
   PUBMED   16139472
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK005537.1.
            
            On Apr 6, 2007 this sequence version replaced NM_028171.1.
            
            Transcript Variant: This variant (2) encodes isoform 2 and differs
            in the 3' UTR and coding sequence compared to variant 1. Isoforms 1
            and 2 are the same length and differ only in their last two aa.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK005537.1, CF551622.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164134
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-946               AK005537.1         2-947
FEATURES             Location/Qualifiers
     source          1..946
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 9.15 cM"
     gene            1..946
                     /gene="Ceacam13"
                     /gene_synonym="1600012K03Rik; 1600025J19Rik"
                     /note="CEA cell adhesion molecule 13"
                     /db_xref="GeneID:69785"
                     /db_xref="MGI:MGI:1917035"
     exon            1..145
                     /gene="Ceacam13"
                     /gene_synonym="1600012K03Rik; 1600025J19Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             82..873
                     /gene="Ceacam13"
                     /gene_synonym="1600012K03Rik; 1600025J19Rik"
                     /note="isoform 2 precursor is encoded by transcript
                     variant 2; CEA-related cell adhesion molecule 13;
                     Ceacam13-C1; Ceacam13-C2; carcinoembryonic antigen-related
                     cell adhesion molecule 13"
                     /codon_start=1
                     /product="carcinoembryonic antigen-related cell adhesion
                     molecule 13 isoform 2 precursor"
                     /protein_id="NP_082447.1"
                     /db_xref="CCDS:CCDS20866.1"
                     /db_xref="GeneID:69785"
                     /db_xref="MGI:MGI:1917035"
                     /translation="MMNSAALSCKDCTSWQGLLFTVSLLTCWLHPTTSHLTIKAVPPI
                     AVEGENVLLFVHNLPKNVKAFSWYSGAAPFKCCEIASHVIATNFTAVGLAHSGRETVL
                     NNGSLLIKSVTRKDSGYYTLRTLDSTSRPEIIRAEFFVHRPLLGYKKHLTPSQLTIQL
                     VPLRVEENINIFLSVFNLPKKLQVFAWHKGVLPLEHLKIASHSFLTNSTTLGYAYYDR
                     VKVRNDGSLLLFNVKKKDAGLYTLRTVSVDLISEWAIIDLQVNSK"
     exon            146..505
                     /gene="Ceacam13"
                     /gene_synonym="1600012K03Rik; 1600025J19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            506..946
                     /gene="Ceacam13"
                     /gene_synonym="1600012K03Rik; 1600025J19Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggagagttg agtgtggaaa cagcactgga gctgaagctt ttcacagatg tagacagagc
       61 aggtggcagg tggcagaggt catgatgaac tctgctgcac tttcctgtaa agactgcacc
      121 tcttggcagg ggcttctgtt cacagtctct cttttaacat gctggctgca tcccactact
      181 tctcatctca ccattaaagc agtgcctccc attgctgttg aaggggaaaa cgttcttctg
      241 tttgtgcata acctgccaaa gaatgttaaa gccttttcct ggtactcggg agctgcaccg
      301 ttcaagtgtt gtgaaattgc aagtcatgtg atagctacca attttactgc agtgggactt
      361 gcacacagtg gtagagagac agtactcaac aatggatctc tgttgatcaa gagtgttacc
      421 agaaaagact caggatacta cactctacga acacttgatt caacctcaag acctgaaata
      481 atacgtgcag aattctttgt acaccgccca ctattaggct acaagaagca tcttacccct
      541 tctcaactca caattcagtt ggtgccactt agggttgaag aaaacatcaa tatttttctg
      601 tcggttttta atctgccaaa gaagcttcaa gtctttgcct ggcacaaagg agtacttcca
      661 cttgaacatt tgaagatagc aagccattca ttcctcacca attcaaccac tctggggtat
      721 gcatattatg acagagtgaa agtacgcaat gatgggtcct tgcttctctt caatgtcaag
      781 aagaaagacg cagggcttta taccctacga accgtatctg ttgatttgat atcagaatgg
      841 gccattattg acctccaagt aaatagtaag tgactctttg cgactcctgg gtgaaggtgg
      901 ggtttattct tctctgtata cctaagacaa tgaggattgt actgtg
//
