LOCUS       NM_007673               2145 bp    mRNA    linear   ROD 14-JAN-2025
DEFINITION  Mus musculus caudal type homeobox 2 (Cdx2), mRNA.
ACCESSION   NM_007673
VERSION     NM_007673.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2145)
  AUTHORS   Fan,W., Li,Z., He,X., Wang,X., Sun,M. and Yang,Z.
  TITLE     SLC25A1 regulates placental development to ensure embryonic heart
            morphogenesis
  JOURNAL   Development 151 (22) (2024)
   PUBMED   39591637
REFERENCE   2  (bases 1 to 2145)
  AUTHORS   He,X.D., Taylor,L.F., Miao,X., Shi,Y., Lin,X., Yang,Z., Liu,X.,
            Miao,Y.L., Alfandari,D., Cui,W., Tremblay,K.D. and Mager,J.
  TITLE     Overlapping peri-implantation phenotypes of ZNHIT1 and ZNHIT2
            despite distinct functions during early mouse developmentdagger
  JOURNAL   Biol Reprod 111 (5), 1017-1029 (2024)
   PUBMED   39194072
REFERENCE   3  (bases 1 to 2145)
  AUTHORS   Chen,S., Hayoun-Neeman,D., Nagar,M., Pinyan,S., Hadad,L.,
            Yaacobov,L., Alon,L., Shachar,L.E., Swissa,T., Kryukov,O.,
            Gershoni-Yahalom,O., Rosental,B., Cohen,S. and Lichtenstein,R.G.
  TITLE     Terminal alpha1,2-fucosylation of glycosphingolipids by FUT1 is a
            key regulator in early cell-fate decisions
  JOURNAL   EMBO Rep 25 (10), 4433-4464 (2024)
   PUBMED   39256596
REFERENCE   4  (bases 1 to 2145)
  AUTHORS   Chen,R., Fan,R., Chen,F., Govindasamy,N., Brinkmann,H.,
            Stehling,M., Adams,R.H., Jeong,H.W. and Bedzhov,I.
  TITLE     Analyzing embryo dormancy at single-cell resolution reveals dynamic
            transcriptional responses and activation of integrin-Yap/Taz
            prosurvival signaling
  JOURNAL   Cell Stem Cell 31 (9), 1262-1279 (2024)
   PUBMED   39047740
REFERENCE   5  (bases 1 to 2145)
  AUTHORS   Bi,S., Huang,L., Chen,Y., Hu,Z., Li,S., Wang,Y., Huang,B.,
            Zhang,L., Huang,Y., Dai,B., Du,L., Tu,Z., Wang,Y., Xu,D., Xu,X.,
            Sun,W., Kzhyshkowska,J., Wang,H., Chen,D., Wang,F. and Zhang,S.
  TITLE     KAT8-mediated H4K16ac is essential for sustaining trophoblast
            self-renewal and proliferation via regulating CDX2
  JOURNAL   Nat Commun 15 (1), 5602 (2024)
   PUBMED   38961108
  REMARK    Publication Status: Online-Only
REFERENCE   6  (bases 1 to 2145)
  AUTHORS   Suh,E. and Traber,P.G.
  TITLE     An intestine-specific homeobox gene regulates proliferation and
            differentiation
  JOURNAL   Mol Cell Biol 16 (2), 619-625 (1996)
   PUBMED   8552090
REFERENCE   7  (bases 1 to 2145)
  AUTHORS   Beck,F., Erler,T., Russell,A. and James,R.
  TITLE     Expression of Cdx-2 in the mouse embryo and placenta: possible role
            in patterning of the extra-embryonic membranes
  JOURNAL   Dev Dyn 204 (3), 219-227 (1995)
   PUBMED   8573715
REFERENCE   8  (bases 1 to 2145)
  AUTHORS   Suh,E., Chen,L., Taylor,J. and Traber,P.G.
  TITLE     A homeodomain protein related to caudal regulates
            intestine-specific gene transcription
  JOURNAL   Mol Cell Biol 14 (11), 7340-7351 (1994)
   PUBMED   7935448
REFERENCE   9  (bases 1 to 2145)
  AUTHORS   James,R., Erler,T. and Kazenwadel,J.
  TITLE     Structure of the murine homeobox gene cdx-2. Expression in
            embryonic and adult intestinal epithelium
  JOURNAL   J Biol Chem 269 (21), 15229-15237 (1994)
   PUBMED   7910823
REFERENCE   10 (bases 1 to 2145)
  AUTHORS   James,R. and Kazenwadel,J.
  TITLE     Homeobox gene expression in the intestinal epithelium of adult mice
  JOURNAL   J Biol Chem 266 (5), 3246-3251 (1991)
   PUBMED   1671571
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK049566.1.
            
            On Apr 17, 2007 this sequence version replaced NM_007673.2.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK049566.1, AK049574.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849377, SAMN00849378
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2145              AK049566.1         2-2146
FEATURES             Location/Qualifiers
     source          1..2145
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 86.86 cM"
     gene            1..2145
                     /gene="Cdx2"
                     /gene_synonym="Cdx-2"
                     /note="caudal type homeobox 2"
                     /db_xref="GeneID:12591"
                     /db_xref="MGI:MGI:88361"
     exon            1..805
                     /gene="Cdx2"
                     /gene_synonym="Cdx-2"
                     /inference="alignment:Splign:2.1.0"
     exon            806..951
                     /gene="Cdx2"
                     /gene_synonym="Cdx-2"
                     /inference="alignment:Splign:2.1.0"
     exon            952..2145
                     /gene="Cdx2"
                     /gene_synonym="Cdx-2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tccgcgagcc aacctgcggc gggtcatccc cgcctctaca gcttactggc aaggaggtgg
       61 gaggaaagaa ggaagagagg ggaggaggca ggacggaggg agggactgcc cgggaggcag
      121 aagctctgca aggagccgac ggagcaccgt gggctgaggt gcagccagct acctttatct
      181 ctagccccct gcgcctcgcg cctctggcag ccttcaacgt ttgtccccag acagcatggt
      241 gaggtctgct ctgggtccct cgccaccatg tacgtgagct accttctgga caaggacgtg
      301 agcatgtatc ctagctccgt gcgccactcc ggcggcctga acctggctcc gcagaacttt
      361 gtcagtcctc cgcagtaccc ggactacggt ggttaccacg tggcggccgc ggcggctgct
      421 acggcgaact tggacagcgc tcagtcccca gggccatcct ggcccaccgc gtacggcgcc
      481 cctctccgcg aggactggaa tggctacgca cccgggggcg ctgcggcagc caacgcggta
      541 gcccacggtc tcaatggtgg ctccccggcc gccgctatgg gctacagcag ccccgccgaa
      601 taccacgcgc accatcaccc gcatcatcac ccgcaccatc cggccgcctc gccgtcctgc
      661 gcctccggct tgctgcagac gctcaacctc ggccccccgg ggcccgcagc caccgccgcc
      721 gccgaacagc tgtcccccag cggccagcgg cgaaacctgt gcgagtggat gcggaagccc
      781 gcgcagcagt ccctaggaag ccaagtgaaa accaggacaa aagacaaata ccgggtggtg
      841 tacacagacc atcagcggct ggagctggag aaggagtttc actttagtcg atacatcacc
      901 atcaggagga aaagtgagct ggctgccaca cttgggctct ccgagaggca ggttaaaatt
      961 tggtttcaga accgcagagc caaggagagg aaaatcaaga agaagcagca gcagcaacag
     1021 cagcagcagc aacaacagcc tccacagccg ccgccacaac cttcccagcc tcagccgggt
     1081 gccctgcgga gcgtgcccga gcccttgagt cctgtgacct ccttgcaagg ctcagtgcct
     1141 ggttctgtcc ctggggttct ggggccagct ggaggggttt taaactccac tgtcacccag
     1201 tgacccctcc cgtggtctga agcggcggcg gcacagcaat cccaggctga gccatgagga
     1261 gtatggacgc tgcgagaatc ctcagaagag attcctctcc tcctacccac gaacagcatc
     1321 tactgatgga gattgaggac agaagatgag tggaattatg gacctcaggg gaagacatgg
     1381 tttagatttt ttttttcttt ttaacttttc ccattccgac tcttcctgcc agcaacgaca
     1441 aacgaagtga ttcctggggc ttcttcgttc atgctctttg ccaggactga ctaccgacat
     1501 gaagctatca gcctcttttg ccccagctct ttgcctctct gtatttctgt gtggagctga
     1561 ggagagagtg agactggatg gggtgggggt agcaatactt gagccaaggt ggctgtttcc
     1621 tgctgactgc tttctgagaa ccagctggcc gtcctgcctc cgggccaggg actattcaaa
     1681 ctacaggagc cagaggcagc taagatagct ggactgaccg aagtctgcag aacctccccc
     1741 accaggtggt ctgggctttc ttctccacaa atcaggaagg ggtggtgggt tcaggggctg
     1801 cggtgagagg gggttggtta gccaacgcca ggcccctgcg acaagggctt gtttagaaag
     1861 cctgtcacca gagctgctgt aggcggaatg tatgtctgtg ttgtaaatgc cagagccaac
     1921 ctggacttcc tgtcccttcc ctcgtctttg gctgaagaag accggaattg tttgctgctg
     1981 ttcgagtcac tgatctgtgt aacgagccaa acaagccttt taaaaagcct tcttgatcca
     2041 tgggtagaga agttgtatgg tgaagggaag tcgggagggg gggaagggga tccgaacaca
     2101 gttgactttt attttgtaaa aagacaaaga taaacgaact ttaac
//
