LOCUS       XM_030249239            2710 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus cell death inducing Trp53 target 1 (Cdip1),
            transcript variant X2, mRNA.
ACCESSION   XM_030249239
VERSION     XM_030249239.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000082.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2710
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="16"
     gene            1..2710
                     /gene="Cdip1"
                     /gene_synonym="2700048O17Rik; 5730403B10Rik; CDIP"
                     /note="cell death inducing Trp53 target 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 31 ESTs, 2384 long SRA reads, 7 Proteins, and 99%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 40 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:66626"
                     /db_xref="MGI:MGI:1913876"
     CDS             386..1012
                     /gene="Cdip1"
                     /gene_synonym="2700048O17Rik; 5730403B10Rik; CDIP"
                     /codon_start=1
                     /product="cell death-inducing p53-target protein 1 isoform
                     X1"
                     /protein_id="XP_030105099.1"
                     /db_xref="GeneID:66626"
                     /db_xref="MGI:MGI:1913876"
                     /translation="MSNEPPPPYPGGPTAPLLEEKSGAPLTPGRTSPAVMQPPPGMPL
                     PSADIAPPPYEPPGQPVPQPGFVPPHMNADGTYMPAGFYPPPGPHPPMGYYPPGPYPP
                     GPYPGPGGHTATVLVPSGAATTVTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGLM
                     NFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYICTYKRLC"
ORIGIN      
        1 ggatttcgag gtaaacgggc ctgggttgtc gtggtggagt ccgttccctc cgaaacgcca
       61 cgcaaaatca gggcagttga tttcggcgtg gctgcagctg cggggctgcg agggctagca
      121 ttccagggcc ccgagcgaac tgggcctgca gacaggggat atcagccaga gaagggccag
      181 cccactcggg tgattatcac gcctttctac ttttctgtaa gcgacggctg tacgagccat
      241 tttcctcggg gtatggaggg ttgaggaacg gcgatcggtc ggggaggatc cctgagcctc
      301 ctagatctgc ctccgctgaa ttactctcac ctacttctgt tctctgcacc agaaatctga
      361 gatccaggag tatcagcagg caaagatgtc taatgagcca ccccctcctt atccaggagg
      421 tcctacagcc ccactactgg aggaaaaaag tggagcccca cttaccccag gccgaacctc
      481 accagctgtg atgcagcctc caccaggcat gccactgcct tctgctgaca ttgcccctcc
      541 accctatgag ccacctggcc aaccagtgcc tcagcctggc tttgtgcccc cccatatgaa
      601 tgcagatggc acctacatgc ctgcaggttt ctaccctcct ccagggcctc acccacctat
      661 gggctattat ccaccaggac cctacccacc agggccctac cctggccctg ggggccacac
      721 ggccacagta ttggtcccat caggggcagc caccacggtg acagtactgc agggagagat
      781 ctttgaaggc gcaccagtgc agacagtgtg tcctcactgc cagcaggcca tcaccaccaa
      841 gatctcctac gagataggcc tgatgaactt tgtgctgggt ttcttctgct gcttcatggg
      901 gtgtgacctg ggctgctgtt tgatcccctg cctcatcaat gacttcaagg atgtgacgca
      961 cacatgtccc agctgcaaag cctacatctg cacatacaag cgcttgtgct aacagagcca
     1021 gacttggact cccctaccta ttagtctggc ccccatgtgc tttgctcccc atgctcagtg
     1081 gtcactatcc cctcaactcc ccacttaggg ttggaagttc tgccactgta ctctggaaat
     1141 cctgtcctca ccttgccctt ccctgagcat ccgactcttc cagcaacaat tctgttggat
     1201 ttaaggccaa gggccagtgg gtggcatggg gtggcactaa tcttgtgtgt tgcttggaca
     1261 tttgcaattc agaagataag ctagagaggc tcttactagg gccctcattt ctccttttct
     1321 gtataagtat aaggtccagg ctggtcctta ctcttcctgg gaccaaaagc acccagaggc
     1381 attaacaggt ccccagacta gggcctacac tgagggtaga acctggaacc acagttgttg
     1441 ctgacctgct ggaatgaagt cagagtatca tctaaagtta agtagaccca agcaagacag
     1501 ggtcttaagg cctgggttta agtggggctt cttgtctggg gtaccaagat agggaaagaa
     1561 agaaataatg actgccagcc ctggacctca gaattctcag gtatggaaac actcaagagc
     1621 tgcctggtat gaagcaaaga ggatcctggg ctatttaaag ctctggtaac cgagaagaac
     1681 ttgcccctgt tcttacctag cttctttgag tcagtcagtg tgcagagctc ctttctggcc
     1741 acacctctgt gaacccctat attttctggg actggaagga atgaatgccc atgtcctgtc
     1801 tacttctgtg tctgtgctat gtgggggtgc aacttctgcc tggtggtttg tgacatggca
     1861 gatcagaagt gcctccttgt aggttcattg gtctctggaa taagtgccag cctttttgcc
     1921 atagttgact tgcttccata ttggagctcc tcagtaggaa cagctgtggc actgggctgg
     1981 ggaccaggaa gaagtcacaa gtggtgggag tatcctaggg acatgagtcg tgcccagggt
     2041 ataaacccaa acctggtcat ttcttgaaca gtctgtgaat atgcctgtgt ggacgctgta
     2101 tcctgctgct gtccctctcc tggtctctca cactgcatgg cctcctatca ctgtgaattg
     2161 tggcctggtc gcagtttgta gtttcattaa atggcccttt cactcccctg ccctgggcct
     2221 ctgctgtctt gcctggcttc cttcttttct gagagacagg gtgggactat aggtagtcta
     2281 gtggcaggca ggagcccggg cctgggaaac aacacattta agaacccaat tacaccaaac
     2341 cagaatttat atatatagac ctgccctggg gaaacccagc tgttctgggc cagggcattg
     2401 gtttctgcca tttgcataat tagatgtcca ggctgcagaa cctgagaact ggagccccgt
     2461 cttagcttag taacttctta acctatagct attgctcttt cgtccttaaa caagacagca
     2521 ctactggact aagacctgat agtctgaaga tgacacactg aagtctcggc actcagttct
     2581 tggtaaatca atcttctgaa ctgtgaaggt ggtgggctca gtctctttga gtttccctgc
     2641 tgttctacca ttttttcaca caaagacttt tataggaata gattcctact aataaaaatg
     2701 tttaacttca
//
