LOCUS       NM_001378608            3393 bp    mRNA    linear   ROD 23-NOV-2022
DEFINITION  Mus musculus cadherin related family member 17 (Cdhr17), mRNA.
ACCESSION   NM_001378608
VERSION     NM_001378608.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3393)
  AUTHORS   Harrow JL, Steward CA, Frankish A, Gilbert JG, Gonzalez JM,
            Loveland JE, Mudge J, Sheppard D, Thomas M, Trevanion S and Wilming
            LG.
  TITLE     The Vertebrate Genome Annotation browser 10 years on
  JOURNAL   Nucleic Acids Res 42 (Database issue), D771-D779 (2014)
   PUBMED   24316575
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC158589.7.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on single protein-coding
                                         transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-71                AC158589.7         79098-79168
            72-239              AC158589.7         80113-80280
            240-410             AC158589.7         88796-88966
            411-505             AC158589.7         92537-92631
            506-628             AC158589.7         94003-94125
            629-732             AC158589.7         95538-95641
            733-878             AC158589.7         97261-97406
            879-1061            AC158589.7         99308-99490
            1062-1153           AC158589.7         102944-103035
            1154-1266           AC158589.7         109504-109616
            1267-1412           AC158589.7         110345-110490
            1413-1593           AC158589.7         111950-112130
            1594-1750           AC158589.7         114212-114368
            1751-1856           AC158589.7         123227-123332
            1857-2078           AC158589.7         123877-124098
            2079-2224           AC158589.7         124811-124956
            2225-2366           AC158589.7         143568-143709
            2367-2620           AC158589.7         143894-144147
            2621-2751           AC158589.7         157524-157654
            2752-2850           AC158589.7         158933-159031
            2851-3393           AC158589.7         169204-169746
FEATURES             Location/Qualifiers
     source          1..3393
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5"
     gene            1..3393
                     /gene="Cdhr17"
                     /gene_synonym="Gm28710"
                     /note="cadherin related family member 17"
                     /db_xref="GeneID:102640594"
                     /db_xref="MGI:MGI:5579416"
     exon            1..71
                     /gene="Cdhr17"
                     /gene_synonym="Gm28710"
                     /inference="alignment:Splign:2.1.0"
     CDS             38..2926
                     /gene="Cdhr17"
                     /gene_synonym="Gm28710"
                     /codon_start=1
                     /product="uncharacterized protein LOC102640594 precursor"
                     /protein_id="NP_001365537.1"
                     /db_xref="GeneID:102640594"
                     /db_xref="MGI:MGI:5579416"
                     /translation="MNIFKIFLICAVFSCIGAEIQILINPVNLPENELPGTELSRAYD
                     KDVAGRPNAYRLLNKSKDFVIDANSGVITSTKIFNYETDPTRFLLIVDTGGMMRRVLT
                     INIIDVPEPPDCTIDPLFSSGSATFEIAEDYPLFQAICKVNVTDEDIAHGDRLTYNIE
                     TELSGPKRGAKSFGVDPVNGVVSLRGEDILDFDAGYHSFQLSVRVTDTAGLFCQGTII
                     INIININDETPQFEPFPMDSINVTEKKPIGDFVARVKATDRDEDSTVMYSFKTQQEMF
                     ALDPYTGIITVLQPLNLDNPSNSRIYHLEIEARDDGNNTSSYMFTVFVEKVDDPISCD
                     LSFSTGTGISVSVPENIPSSAFIYAILSRDPDVEQEVELFQLAIAVRNRDSLSLESCV
                     GTITINIQNVNDESPVLIYRPEAPININENLPVGTKLAKFMATDRDIGDTVHYEFIGT
                     QKEFAINEDIGEVTVAYPLDYEDDTIPKSWVLYVRVYDNERTHSTTGTLTVILQDVND
                     NPPRCSQEIYVIELPENIPVDTTLVSLTCTDQDGTIPNNNITYHLIKNTFANKTFTLT
                     NSELKIGPMNLDYDSTIFAGMDFKHTLFVRVSDEGIPVLSTIIRIILRVSRINEHNPA
                     GSMMEFTFSIFENSPTDTLVGKITFIDEDWPFNNIHYSIVGGNFGIPPTFYIESDTGM
                     IKLLSSLDREVTSQYKITVRVIDMGNDVLPDPLRQRSATAQVTINVLNVNDEPPVCTP
                     PHVETQIYATFRGPIIPLRCSDKDSPQDHLSYSITEGNTNNQFILWREGAESPFLATR
                     QDFQYDLLEGVQDVVTFQLLIEVTDELGRNTARQLTATTTVIIHVLPWTTTQPTSSTK
                     TATTTITTSVLRKISYYWRPDSWFSAVLTLAGVLFMMGLYAVVWCLFKDVQFCSRLFP
                     HCHRQKSQPSLTVQDEKDAEQVPSDRNAVSTEQPDKGMKRNFFQRETF"
     exon            72..239
                     /gene="Cdhr17"
                     /gene_synonym="Gm28710"
                     /inference="alignment:Splign:2.1.0"
     exon            240..410
                     /gene="Cdhr17"
                     /gene_synonym="Gm28710"
                     /inference="alignment:Splign:2.1.0"
     exon            411..505
                     /gene="Cdhr17"
                     /gene_synonym="Gm28710"
                     /inference="alignment:Splign:2.1.0"
     exon            506..628
                     /gene="Cdhr17"
                     /gene_synonym="Gm28710"
                     /inference="alignment:Splign:2.1.0"
     exon            629..732
                     /gene="Cdhr17"
                     /gene_synonym="Gm28710"
                     /inference="alignment:Splign:2.1.0"
     exon            733..878
                     /gene="Cdhr17"
                     /gene_synonym="Gm28710"
                     /inference="alignment:Splign:2.1.0"
     exon            879..1061
                     /gene="Cdhr17"
                     /gene_synonym="Gm28710"
                     /inference="alignment:Splign:2.1.0"
     exon            1062..1153
                     /gene="Cdhr17"
                     /gene_synonym="Gm28710"
                     /inference="alignment:Splign:2.1.0"
     exon            1154..1266
                     /gene="Cdhr17"
                     /gene_synonym="Gm28710"
                     /inference="alignment:Splign:2.1.0"
     exon            1267..1412
                     /gene="Cdhr17"
                     /gene_synonym="Gm28710"
                     /inference="alignment:Splign:2.1.0"
     exon            1413..1593
                     /gene="Cdhr17"
                     /gene_synonym="Gm28710"
                     /inference="alignment:Splign:2.1.0"
     exon            1594..1750
                     /gene="Cdhr17"
                     /gene_synonym="Gm28710"
                     /inference="alignment:Splign:2.1.0"
     exon            1751..1856
                     /gene="Cdhr17"
                     /gene_synonym="Gm28710"
                     /inference="alignment:Splign:2.1.0"
     exon            1857..2078
                     /gene="Cdhr17"
                     /gene_synonym="Gm28710"
                     /inference="alignment:Splign:2.1.0"
     exon            2079..2224
                     /gene="Cdhr17"
                     /gene_synonym="Gm28710"
                     /inference="alignment:Splign:2.1.0"
     exon            2225..2366
                     /gene="Cdhr17"
                     /gene_synonym="Gm28710"
                     /inference="alignment:Splign:2.1.0"
     exon            2367..2620
                     /gene="Cdhr17"
                     /gene_synonym="Gm28710"
                     /inference="alignment:Splign:2.1.0"
     exon            2621..2751
                     /gene="Cdhr17"
                     /gene_synonym="Gm28710"
                     /inference="alignment:Splign:2.1.0"
     exon            2752..2850
                     /gene="Cdhr17"
                     /gene_synonym="Gm28710"
                     /inference="alignment:Splign:2.1.0"
     exon            2851..3393
                     /gene="Cdhr17"
                     /gene_synonym="Gm28710"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agacctcagt gtatgcgttg gagaagccag cctaaatatg aatatcttca agattttctt
       61 aatatgtgca gtgttttcct gtattggagc agaaattcag atactaatca accctgtgaa
      121 tttgcctgaa aatgagcttc ctggaacaga actaagccgt gcttatgaca aagatgtggc
      181 tgggagacca aatgcctacc gcttactgaa taaatcaaaa gattttgtca tcgatgcaaa
      241 ttcaggtgtc atcacatcta caaaaatctt taattatgaa acagatccaa ccaggtttct
      301 acttatagtt gatactggag gaatgatgag acgtgttttg actattaata taattgatgt
      361 tccagaacct ccagactgta ctattgaccc cctcttttct tcaggctcag ctacgtttga
      421 aattgctgag gactatccac tctttcaagc catttgtaaa gtgaatgtca cagatgaaga
      481 cattgcacat ggtgacaggc tgacatacaa cattgagaca gaattatctg gaccaaagag
      541 gggagcaaag tcctttggag tagatcctgt aaatggtgtt gttagcttaa gaggtgaaga
      601 tatcttggat tttgatgctg gatatcattc tttccagctg tcagtgagag tgacagatac
      661 agcaggcttg ttctgtcaag ggacaataat tatcaacatt ataaacataa acgatgagac
      721 acctcagttt gagccatttc ctatggattc aattaatgtg actgagaaga aacccattgg
      781 agattttgta gcaagggtaa aagccacaga ccgcgatgaa gacagcactg tcatgtattc
      841 ctttaaaacc cagcaggaaa tgtttgcttt agacccttac acaggtataa tcactgttct
      901 tcaacctttg aatcttgaca atccaagtaa ctccagaatc taccatttgg aaattgaagc
      961 cagagatgat ggcaacaaca ccagctcata tatgttcaca gtttttgtgg aaaaggtcga
     1021 tgaccctatt tcctgtgatc tgagtttctc aacaggcaca ggtatttcgg tctctgttcc
     1081 tgaaaatatc ccctcatctg cttttatata cgcaattctt tcaagagatc cagatgtgga
     1141 acaagaggtt gaacttttcc agctagcaat cgctgtgaga aatagggaca gcctgtctct
     1201 ggagtcatgc gttggcacca tcactataaa catccaaaat gttaatgatg agagtcctgt
     1261 tctgatatac agaccagagg cacctataaa tattaatgaa aatctgcctg ttggaacaaa
     1321 gttggccaag ttcatggcaa cagatagaga tataggggat acagtacatt atgaattcat
     1381 aggtacacag aaagagtttg ctataaatga agacattgga gaagtcactg ttgcctatcc
     1441 attagactat gaagatgata caatccccaa atcttgggta ttatatgtta gagtttatga
     1501 taatgagcga acacattcaa caactgggac actcacagtg attctacagg atgtaaatga
     1561 caaccctcca cgatgctctc aggaaattta tgtaattgaa cttcctgaga acattccagt
     1621 tgacaccact ttagtctccc taacttgtac agatcaggat ggaactattc ccaataacaa
     1681 tataacttat catttgatta aaaacacttt tgcaaacaaa acctttactc ttacaaacag
     1741 tgaattgaaa attggaccta tgaatctaga ttatgatagt acaatttttg caggaatgga
     1801 ctttaaacac acattatttg taagagtatc tgatgaaggt attcctgtac tctcaaccat
     1861 cattagaatc atattaagag tgagccgtat aaatgaacac aatcctgctg ggtctatgat
     1921 ggaatttacc ttcagtatat ttgaaaacag tccaactgat acactagttg gaaaaattac
     1981 gtttattgat gaagactggc cattcaacaa tatacactat agcattgttg gaggtaactt
     2041 tgggatacct cccacatttt acatcgaatc agatacaggg atgataaagc tgttgagttc
     2101 actggacagg gaagtgactt ctcagtataa gataactgtg agagtcatag acatgggaaa
     2161 tgacgtgctc ccagaccctc tcaggcagag aagtgctact gctcaggtga ccatcaacgt
     2221 cctgaatgtg aacgatgagc ctccagtctg cacaccacca catgtagaga ctcagattta
     2281 tgccaccttt agggggccta tcattcccct caggtgttca gacaaggatt ctccacagga
     2341 tcacctcagt tattcaatca cagaaggaaa cacaaacaat cagttcatac tttggagaga
     2401 aggtgctgag tctccatttc tggccaccag gcaagatttc cagtatgatc tattagaagg
     2461 agtccaagat gtagtgactt tccagttact tattgaagtc actgacgaat tgggcaggaa
     2521 tacagctaga cagctgacag ccactactac agtcataatt catgtgcttc cctggactac
     2581 aacacagcca acttcttcca caaaaacagc tacaactact attactactt ctgtcttaag
     2641 gaagatctca tactactgga ggcctgacag ctggttttca gcagtgctca cgctagcggg
     2701 agttctcttc atgatgggtc tttatgcagt tgtgtggtgc ctcttcaaag atgttcaatt
     2761 ctgctcaaga ctatttcctc actgtcacag acagaagagt caaccaagtc tgactgtaca
     2821 ggatgaaaag gatgctgagc aggtaccaag tgacagaaat gcagtatcga ctgaacaacc
     2881 agacaagggg atgaaaagaa atttttttca acgggagaca ttttgacttt aaccagaaga
     2941 aaggttacta tatctccatg ttgctttatt tgaaaaggtc tttgaaaaca cagcttttta
     3001 aaaataaaag accatcaagt tttccaacat agcctggtac ttttgtataa cttgtcacat
     3061 gctctgatgc acctcttttc taccactgca cttgggctaa gatttatatg ccataaagat
     3121 atgtttgtga acagttaaga atctactgtg acttatttat caccagttga aaatacactg
     3181 atctaaattg tgctcagatt gtggtaatat ctcaataact agttttaatg tatttaggat
     3241 tgattgccat tatacagatt aattcagaac ataaaataca cactagaaga ctaaattctt
     3301 tgttaagtta ccaagatatt tgtatttagt tttgaaagac aaggatgagc atgtatgata
     3361 atttcatatc ttataaacaa tgacattttc taa
//
