LOCUS       NM_199470               2728 bp    mRNA    linear   ROD 12-NOV-2023
DEFINITION  Mus musculus cadherin-like 24 (Cdh24), mRNA.
ACCESSION   NM_199470 XM_139122
VERSION     NM_199470.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2728)
  AUTHORS   Polanco J, Reyes-Vigil F, Weisberg SD, Dhimitruka I and Bruses JL.
  TITLE     Differential Spatiotemporal Expression of Type I and Type II
            Cadherins Associated With the Segmentation of the Central Nervous
            System and Formation of Brain Nuclei in the Developing Mouse
  JOURNAL   Front Mol Neurosci 14, 633719 (2021)
   PUBMED   33833667
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2728)
  AUTHORS   Bibollet-Bahena O, Okafuji T, Hokamp K, Tear G and Mitchell KJ.
  TITLE     A dual-strategy expression screen for candidate connectivity labels
            in the developing thalamus
  JOURNAL   PLoS One 12 (5), e0177977 (2017)
   PUBMED   28558017
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 2728)
  AUTHORS   Duan X, Krishnaswamy A, De la Huerta I and Sanes JR.
  TITLE     Type II cadherins guide assembly of a direction-selective retinal
            circuit
  JOURNAL   Cell 158 (4), 793-807 (2014)
   PUBMED   25126785
REFERENCE   4  (bases 1 to 2728)
  AUTHORS   Thompson CL, Ng L, Menon V, Martinez S, Lee CK, Glattfelder K,
            Sunkin SM, Henry A, Lau C, Dang C, Garcia-Lopez R, Martinez-Ferre
            A, Pombero A, Rubenstein JLR, Wakeman WB, Hohmann J, Dee N, Sodt
            AJ, Young R, Smith K, Nguyen TN, Kidney J, Kuan L, Jeromin A,
            Kaykas A, Miller J, Page D, Orta G, Bernard A, Riley Z, Smith S,
            Wohnoutka P, Hawrylycz MJ, Puelles L and Jones AR.
  TITLE     A high-resolution spatiotemporal atlas of gene expression of the
            developing mouse brain
  JOURNAL   Neuron 83 (2), 309-323 (2014)
   PUBMED   24952961
REFERENCE   5  (bases 1 to 2728)
  AUTHORS   Lefkovics K, Mayer M, Bercsenyi K, Szabo G and Lele Z.
  TITLE     Comparative analysis of type II classic cadherin mRNA distribution
            patterns in the developing and adult mouse somatosensory cortex and
            hippocampus suggests significant functional redundancy
  JOURNAL   J Comp Neurol 520 (7), 1387-1405 (2012)
   PUBMED   22102170
REFERENCE   6  (bases 1 to 2728)
  AUTHORS   Faulkner-Jones BE, Godinho LN and Tan SS.
  TITLE     Multiple cadherin mRNA expression and developmental regulation of a
            novel cadherin in the developing mouse eye
  JOURNAL   Exp Neurol 156 (2), 316-325 (1999)
   PUBMED   10328938
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ087875.1 and BC057373.1.
            
            [WARNING] On Jan 17, 2024 this sequence was replaced by
            NM_199470.3.
            
            On Jun 18, 2009 this sequence version replaced NM_199470.1.
            
            ##Evidence-Data-START##
            CDS exon combination :: BC057373.1 [ECO:0000331]
            RNAseq introns       :: single sample supports all introns
                                    SAMN01164142 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-46                CJ087875.1         4-49
            47-2728             BC057373.1         1-2682
FEATURES             Location/Qualifiers
     source          1..2728
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14 27.87 cM"
     gene            1..2728
                     /gene="Cdh24"
                     /gene_synonym="1700040A22Rik"
                     /note="cadherin-like 24"
                     /db_xref="GeneID:239096"
                     /db_xref="MGI:MGI:1928330"
     exon            1..144
                     /gene="Cdh24"
                     /gene_synonym="1700040A22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            145..462
                     /gene="Cdh24"
                     /gene_synonym="1700040A22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            463..757
                     /gene="Cdh24"
                     /gene_synonym="1700040A22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            758..877
                     /gene="Cdh24"
                     /gene_synonym="1700040A22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            878..1045
                     /gene="Cdh24"
                     /gene_synonym="1700040A22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1046..1233
                     /gene="Cdh24"
                     /gene_synonym="1700040A22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1234..1487
                     /gene="Cdh24"
                     /gene_synonym="1700040A22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1488..1624
                     /gene="Cdh24"
                     /gene_synonym="1700040A22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1625..1746
                     /gene="Cdh24"
                     /gene_synonym="1700040A22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1747..1858
                     /gene="Cdh24"
                     /gene_synonym="1700040A22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1859..2107
                     /gene="Cdh24"
                     /gene_synonym="1700040A22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2108..2728
                     /gene="Cdh24"
                     /gene_synonym="1700040A22Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctcccttgt tctcgccggg gccgctcaga cctgcagcgg agccgcggcg ccggcttgga
       61 tcggcttggg gctgtgcccc cgggagccag cgacggaggc gggcggggcg ctgttcgcgg
      121 tcccgggccc ctcggtagtg ccaggtgtgg atccatgggg tagcctcaac gcgtcttccc
      181 cagccagctc atgggccacc tggccctgcc cagcctcggc acctggggcc agtgaacaag
      241 agccctggct ggattacaaa catgtggggc cttgtgaggc tcctgctggc ctggctgggt
      301 ggctggggct gcatggggcg cctggcagct ccagtcccag cctgggcagg gtccagggga
      361 cactcgggtc ctacactgct gcggacccga aggagctggg tctggaacca gttctttgtc
      421 attgaggaat attctggtcc agagcctgtc cttattggca agctgcactc agatgttgac
      481 cggggtgagg gccgcaccaa gtacctgctg accggggagg gggcaggcac tgtgtttgtg
      541 attgatgagg ccacaggcaa tatccatgtg accaagagcc tggatcggga agagaaggca
      601 caatatgtgc tgctggccca agctgtggac cgtgcctcta accggcccct ggaaccccca
      661 tcggagttca tcatcaaagt gcaagacatc aatgacaatc cgcctgtgtt tcccctcggg
      721 ccctaccatg ccaccgtgcc tgagatgtcc aatgttggga cgtctgtaat ccaagtgact
      781 gctcacgatg ccgacgatcc cagctatgga aacagtgcca aacttgtgta cacggtgctg
      841 gatgggctgc ctttcttctc tgtggacccc cagactggag tggttcgtac agccatcccc
      901 aacatggacc gggagaccca agaggagttc ttggtggtga ttcaagccaa ggatatgggt
      961 ggccacatgg gggggctgtc aggcagcact acagtgacag tcaccctcag cgatgtcaac
     1021 gacaaccccc ccaagttccc tcagagtcta taccagttct cagtggtgga gacagctgga
     1081 cctggaaccc tggtgggccg gcttaaggcc caggacccag acctagggga taatgctctc
     1141 gtggcataca gcatcctgaa tggggaagga tcagaggtct tcagcatcag cacagactcc
     1201 cagggccagg acgggctcct tactgtccgc aagcccctgg acttcgagac tcgtcgctct
     1261 tacaccttcc gtgtagaagc caccaacaca ctcatcgacc cagcctatct gcggcgaggt
     1321 cccttcaagg atgtggcctc ggtacgagtg actgtgcagg atgctccaga gccgcctgcc
     1381 ttcacccagg ccacctacca cctggcagta cctgaaaaca aggcccctgg aaccctggtg
     1441 ggccagatct cagccagtga cctggactcc cccgccagcc ccatcagata ctccatcctc
     1501 ccccactcgg atccagaacg ttgcttctcc attgagcccg aagacggcac tatccgtaca
     1561 gcagtgcgcc tggaccgcga ggctcgtgtc tggcacaacc tcaccattct ggccacagag
     1621 ttggatagct ctgcacaatc atcccgcgtg caagtggcca tccagaccct ggatgaaaat
     1681 gacaatgctc cccagctggc tgagccctat gacatctttg tatgtgactc tgcagcccct
     1741 ggccagttga ttaaggtcat ccgggctctg gacagagatg aagttggcaa cagtagccaa
     1801 gtctcccttc aaggtcctgt gggccctgat gccaacttta cagtccggga caaccgagat
     1861 ggctctgcca gcctgctgct gccttcccgt cctgctccgc cgcgccaggc cccctacctg
     1921 attcctatcg aactctggga ttgggggcag ccagccctga gcagcactgc cacggtgact
     1981 gtgagtgtgt gtcgctgccg gcctgatggc tccatggcat cctgctggcc tgaggctcag
     2041 ctatcgccca ccggtctcag cactggagcc ctgcttgcca tcgtcacatg tatgggcacc
     2101 cttcttgccc tggtggttct cttcgtggcc ctgaggcggc agaagcagga agccttgatg
     2161 gtactggagg aggaggacgt ccgcgagaac atcatcacct atgatgacga gggtggcgga
     2221 gaggaggaca cggaggcctt cgacatcaca gccttgcaga acccggatgg agccgctcct
     2281 ccagcagccg gcccgccggt acgccgcgac gtgctgccgc ggacccgagc gccacgccag
     2341 cccaggccac ccggccccgc cgatgtggtg cagttgctgg cgttgcggct gcgcgaggcg
     2401 gacgaggacc ccagcgtgcc cccgtatgac tcggtgcagg tgtacggcta tgaaggccgg
     2461 ggctcctcct gcggctcgct cagctccctg ggctcgggca gtgaggctgg cggtgtcccc
     2521 ggccccgccg agccactgga cgactggggt ccactcttcc gcactctggc agagctgtat
     2581 ggggccaagg agcccccggc cccctgaggc cggccctggc cctgccgctg cgctgcggtg
     2641 gggtagcgca cacgggccct ctgagtgagc cccacagggt ccaggcaggc ggcggcagcc
     2701 caggggccca atatgaccct cctttccc
//
