LOCUS       NM_013538               1488 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus cell division cycle associated 3 (Cdca3), mRNA.
ACCESSION   NM_013538
VERSION     NM_013538.5
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1488)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1488)
  AUTHORS   Moon,S., Im,S.K., Kim,N., Youn,H., Park,U.H., Kim,J.Y., Kim,A.R.,
            An,S.J., Kim,J.H., Sun,W., Hwang,J.T., Kim,E.J. and Um,S.J.
  TITLE     Asxl1 exerts an antiproliferative effect on mouse lung maturation
            via epigenetic repression of the E2f1-Nmyc axis
  JOURNAL   Cell Death Dis 9 (11), 1118 (2018)
   PUBMED   30389914
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1488)
  AUTHORS   Naiman,N., Fujioka,K., Fujino,M., Valerius,M.T., Potter,S.S.,
            McMahon,A.P. and Kobayashi,A.
  TITLE     Repression of Interstitial Identity in Nephron Progenitor Cells by
            Pax2 Establishes the Nephron-Interstitium Boundary during Kidney
            Development
  JOURNAL   Dev Cell 41 (4), 349-365 (2017)
   PUBMED   28535371
REFERENCE   4  (bases 1 to 1488)
  AUTHORS   Ray,J.P., Staron,M.M., Shyer,J.A., Ho,P.C., Marshall,H.D.,
            Gray,S.M., Laidlaw,B.J., Araki,K., Ahmed,R., Kaech,S.M. and
            Craft,J.
  TITLE     The Interleukin-2-mTORc1 Kinase Axis Defines the Signaling,
            Differentiation, and Metabolism of T Helper 1 and Follicular B
            Helper T Cells
  JOURNAL   Immunity 43 (4), 690-702 (2015)
   PUBMED   26410627
REFERENCE   5  (bases 1 to 1488)
  AUTHORS   Miller,J.A., Nathanson,J., Franjic,D., Shim,S., Dalley,R.A.,
            Shapouri,S., Smith,K.A., Sunkin,S.M., Bernard,A., Bennett,J.L.,
            Lee,C.K., Hawrylycz,M.J., Jones,A.R., Amaral,D.G., Sestan,N.,
            Gage,F.H. and Lein,E.S.
  TITLE     Conserved molecular signatures of neurogenesis in the hippocampal
            subgranular zone of rodents and primates
  JOURNAL   Development 140 (22), 4633-4644 (2013)
   PUBMED   24154525
REFERENCE   6  (bases 1 to 1488)
  AUTHORS   Machold,R., Klein,C. and Fishell,G.
  TITLE     Genes expressed in Atoh1 neuronal lineages arising from the
            r1/isthmus rhombic lip
  JOURNAL   Gene Expr Patterns 11 (5-6), 349-359 (2011)
   PUBMED   21440680
REFERENCE   7  (bases 1 to 1488)
  AUTHORS   Yoshida,K.
  TITLE     Cell-cycle-dependent regulation of the human and mouse Tome-1
            promoters
  JOURNAL   FEBS Lett 579 (6), 1488-1492 (2005)
   PUBMED   15733861
  REMARK    GeneRIF: a repressor element (cell-cycle-dependent element/cell
            cycle gene homology region) in the vicinity of the transcription
            start site, and mutations within this element diminished the
            cell-cycle-dependent transcriptional regulation of Tome-1
REFERENCE   8  (bases 1 to 1488)
  AUTHORS   Ayad,N.G., Rankin,S., Murakami,M., Jebanathirajah,J., Gygi,S. and
            Kirschner,M.W.
  TITLE     Tome-1, a trigger of mitotic entry, is degraded during G1 via the
            APC
  JOURNAL   Cell 113 (1), 101-113 (2003)
   PUBMED   12679038
REFERENCE   9  (bases 1 to 1488)
  AUTHORS   Ansari-Lari,M.A., Oeltjen,J.C., Schwartz,S., Zhang,Z., Muzny,D.M.,
            Lu,J., Gorrell,J.H., Chinault,A.C., Belmont,J.W., Miller,W. and
            Gibbs,R.A.
  TITLE     Comparative sequence analysis of a gene-rich cluster at human
            chromosome 12p13 and its syntenic region in mouse chromosome 6
  JOURNAL   Genome Res 8 (1), 29-40 (1998)
   PUBMED   9445485
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BB860939.1, AK145537.1 and AK010409.1.
            
            On May 7, 2009 this sequence version replaced NM_013538.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK145537.1, AK010409.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-59                BB860939.1         7-65
            60-1173             AK145537.1         2-1115
            1174-1485           AK010409.1         1115-1426
            1486-1488           AK145537.1         1428-1430
FEATURES             Location/Qualifiers
     source          1..1488
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 59.17 cM"
     gene            1..1488
                     /gene="Cdca3"
                     /gene_synonym="2410005A12Rik; C8; Grcc8; Tome-1"
                     /note="cell division cycle associated 3"
                     /db_xref="GeneID:14793"
                     /db_xref="MGI:MGI:1315198"
     exon            1..98
                     /gene="Cdca3"
                     /gene_synonym="2410005A12Rik; C8; Grcc8; Tome-1"
                     /inference="alignment:Splign:2.1.0"
     exon            99..246
                     /gene="Cdca3"
                     /gene_synonym="2410005A12Rik; C8; Grcc8; Tome-1"
                     /inference="alignment:Splign:2.1.0"
     exon            247..373
                     /gene="Cdca3"
                     /gene_synonym="2410005A12Rik; C8; Grcc8; Tome-1"
                     /inference="alignment:Splign:2.1.0"
     exon            374..667
                     /gene="Cdca3"
                     /gene_synonym="2410005A12Rik; C8; Grcc8; Tome-1"
                     /inference="alignment:Splign:2.1.0"
     exon            668..771
                     /gene="Cdca3"
                     /gene_synonym="2410005A12Rik; C8; Grcc8; Tome-1"
                     /inference="alignment:Splign:2.1.0"
     exon            772..1488
                     /gene="Cdca3"
                     /gene_synonym="2410005A12Rik; C8; Grcc8; Tome-1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1045..1050
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Cdca3"
                     /gene_synonym="2410005A12Rik; C8; Grcc8; Tome-1"
                     /note="hexamer: ATTAAA"
     polyA_site      1065
                     /gene="Cdca3"
                     /gene_synonym="2410005A12Rik; C8; Grcc8; Tome-1"
                     /note="major polyA site"
     regulatory      1290..1295
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Cdca3"
                     /gene_synonym="2410005A12Rik; C8; Grcc8; Tome-1"
                     /note="hexamer: CATAAA"
     polyA_site      1319
                     /gene="Cdca3"
                     /gene_synonym="2410005A12Rik; C8; Grcc8; Tome-1"
     polyA_site      1453
                     /gene="Cdca3"
                     /gene_synonym="2410005A12Rik; C8; Grcc8; Tome-1"
     regulatory      1467..1472
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Cdca3"
                     /gene_synonym="2410005A12Rik; C8; Grcc8; Tome-1"
                     /note="hexamer: ATTATA"
     polyA_site      1488
                     /gene="Cdca3"
                     /gene_synonym="2410005A12Rik; C8; Grcc8; Tome-1"
ORIGIN      
        1 tagggtcggg gcagggggcg tggagggaag tttgaaactc cgggctttgg gagttatttc
       61 tctagctggt gttcgggcag aggtcgagct ggggcccgcc gggccccgtc cccagcccca
      121 gtggagatgg gttcgactca gagcgtctca ggcactccag cacggcctct gccacgcaac
      181 aagcaagtgg ctcgagtagc agaccctcgt tcacctagtg ctggcatcca gcgcactcct
      241 attcaggtag agagctctcc acagccaagc ctaccagcag aacagctgaa cggtctcaaa
      301 caggcacaag acccagatcc ccgctctcct actcttggca ttgcacggac acccatgaag
      361 atcagtggtc cagaccctca gtgctcactg gtgaaagagc tgagcgaagt attggagaca
      421 gaagcgtcgg aatcgatttc ctccccagag cttgctctgc cccgggaaac gcctttattt
      481 tatgacctgg acctgtcttc agatcctcag ttatcccctg aggaccagtt actgccttgg
      541 agccaggctg aactcgatcc caaacaggtg tttaccaagg aggaagccaa acaatccgca
      601 gaaactatag ctgccagcca gaactcagac aagccctcca gagacccaga gactccccag
      661 tcctcaggtt ctaagcgcag cagacgaaaa gcaaacagca aggttctagg gaggtcccct
      721 ctcaccatcc tgcaggatga caactcccct gggaccttga cactacgaca gggtaagcgg
      781 ccttctgccc tcagtgagaa cgttaaggac ctaaaggaag gagtcgttct tggaactgga
      841 agatttctca aagctggagg aggagcacgg gagccaaacc aggaccacga caaggaaaat
      901 cagcattttg ccttgttgga gagctagggc tgtgctggag tcatccccaa gggcaccaaa
      961 gaaagccctg ttctgattcc tctcaggcac caactctggt acttggacat cgttctttta
     1021 aaatgtttta tgtgtttcct gtatattaaa gtagatgatt ttaaatgatg ctttaagaag
     1081 ttagagcaaa gctacaccgg gtcttgtgtg tatagaatgg catcctaggg gcctgtgaga
     1141 cctggataga tctctctcct gccacttctg agcctccttt atgtagctta agctttgatg
     1201 tccccagagc tctgcctttg gccctcttca cttcttgttt gggtttagct attgcttacc
     1261 tgcttgtaat ttccaggtcc ccctctcgac ataaacactc aacgttagtt cccctaaaat
     1321 aagattcatg atctttccct cattgcctac gcctctccct gtggctgggg aaaggtggtc
     1381 atctcctagc tactcaagcc taagcctcgg ctttgggcat catattgaac atgacgtgtc
     1441 tgtgaggttg tcactagggc ctggtgatta tatattcttg tcgtcttc
//
