LOCUS       NM_009850               1023 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus CD3 antigen, gamma polypeptide (Cd3g), mRNA.
ACCESSION   NM_009850
VERSION     NM_009850.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1023)
  AUTHORS   Li,N., Ren,P., Wang,J., Zhu,X., Qiao,X., Zeng,Z., Ye,T., Wang,S.,
            Meng,Z., Gan,H., Liu,S., Sun,Y., Zhu,X., Dou,G. and Gu,R.
  TITLE     Immune-Related Molecules CD3G and FERMT3: Novel Biomarkers
            Associated with Sepsis
  JOURNAL   Int J Mol Sci 25 (2), 749 (2024)
   PUBMED   38255822
  REMARK    GeneRIF: Immune-Related Molecules CD3G and FERMT3: Novel Biomarkers
            Associated with Sepsis.
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1023)
  AUTHORS   Chora,A.F., Marques,S., Goncalves,J.L., Lima,P., Gomes da Costa,D.,
            Fernandez-Ruiz,D., Marreiros,M.I., Ruivo,P., Carvalho,T.,
            Ribeiro,R.M., Serre,K., Heath,W.R., Silva-Santos,B., Tate,A.T. and
            Mota,M.M.
  TITLE     Interplay between liver and blood stages of Plasmodium infection
            dictates malaria severity via gammadelta T cells and IL-17-promoted
            stress erythropoiesis
  JOURNAL   Immunity 56 (3), 592-605 (2023)
   PUBMED   36804959
REFERENCE   3  (bases 1 to 1023)
  AUTHORS   Hosseini,S., Moody,S.C., Fietz,D., Indumathy,S., Schuppe,H.C.,
            Hedger,M.P. and Loveland,K.L.
  TITLE     The changing landscape of immune cells in the fetal mouse testis
  JOURNAL   Histochem Cell Biol 158 (4), 345-368 (2022)
   PUBMED   35829816
REFERENCE   4  (bases 1 to 1023)
  AUTHORS   Cichon,M.A., Klas,K., Buchberger,M., Hammer,M., Sere,K., Zenke,M.,
            Tschachler,E. and Elbe-Burger,A.
  TITLE     Distinct Distribution of RTN1A in Immune Cells in Mouse Skin and
            Lymphoid Organs
  JOURNAL   Front Cell Dev Biol 8, 608876 (2021)
   PUBMED   33542915
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 1023)
  AUTHORS   Coulson,R.L., Powell,W.T., Yasui,D.H., Dileep,G., Resnick,J. and
            LaSalle,J.M.
  TITLE     Prader-Willi locus Snord116 RNA processing requires an active
            endogenous allele and neuron-specific splicing by Rbfox3/NeuN
  JOURNAL   Hum Mol Genet 27 (23), 4051-4060 (2018)
   PUBMED   30124848
REFERENCE   6  (bases 1 to 1023)
  AUTHORS   Morse,H.C. 3rd.
  TITLE     Genetic nomenclature for loci controlling surface antigens of mouse
            hemopoietic cells
  JOURNAL   J Immunol 149 (10), 3129-3134 (1992)
   PUBMED   1431091
  REMARK    Review article
            Erratum:[J Immunol 1993 Mar 15;150(6):2563]
REFERENCE   7  (bases 1 to 1023)
  AUTHORS   Geisler,C.
  TITLE     Failure to synthesize the CD3-gamma chain. Consequences for T cell
            antigen receptor assembly, processing, and expression
  JOURNAL   J Immunol 148 (8), 2437-2445 (1992)
   PUBMED   1532815
REFERENCE   8  (bases 1 to 1023)
  AUTHORS   Charmley,P., Nguyen,J., Wei,S. and Gatti,R.A.
  TITLE     Genetic linkage analysis and homology relationships of genes
            located on human chromosome 11q
  JOURNAL   Genomics 10 (3), 608-617 (1991)
   PUBMED   1679745
REFERENCE   9  (bases 1 to 1023)
  AUTHORS   Kingsley,D.M., Jenkins,N.A. and Copeland,N.G.
  TITLE     A molecular genetic linkage map of mouse chromosome 9 with regional
            localizations for the Gsta, T3g, Ets-1 and Ldlr loci
  JOURNAL   Genetics 123 (1), 165-172 (1989)
   PUBMED   2572508
REFERENCE   10 (bases 1 to 1023)
  AUTHORS   Letourneur,F., Mattei,M.G. and Malissen,B.
  TITLE     The mouse CD3-gamma, -delta, and -epsilon genes reside within 50
            kilobases on chromosome 9, whereas CD3-zeta maps to chromosome 1,
            band H
  JOURNAL   Immunogenetics 29 (4), 265-268 (1989)
   PUBMED   2522910
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY224047.1, BC027528.1 and AC061963.13.
            
            [WARNING] On Aug 9, 2024 this sequence was replaced by NM_009850.3.
            
            On Nov 15, 2007 this sequence version replaced NM_009850.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK134049.1, BC027528.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849383 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            RefSeq Select criteria           :: based on single protein-coding
                                                transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-69                BY224047.1         1-69
            70-849              BC027528.1         1-780
            850-1023            AC061963.13        191183-191356       c
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 24.84 cM"
     gene            1..1023
                     /gene="Cd3g"
                     /gene_synonym="Ctg-3; Ctg3; T3g"
                     /note="CD3 antigen, gamma polypeptide"
                     /db_xref="GeneID:12502"
                     /db_xref="MGI:MGI:88333"
     exon            1..166
                     /gene="Cd3g"
                     /gene_synonym="Ctg-3; Ctg3; T3g"
                     /inference="alignment:Splign:2.1.0"
     CDS             112..660
                     /gene="Cd3g"
                     /gene_synonym="Ctg-3; Ctg3; T3g"
                     /note="T-cell surface glycoprotein CD3 gamma chain; T-cell
                     receptor T3 gamma chain"
                     /codon_start=1
                     /product="T-cell surface glycoprotein CD3 gamma chain
                     precursor"
                     /protein_id="NP_033980.1"
                     /db_xref="CCDS:CCDS23123.1"
                     /db_xref="GeneID:12502"
                     /db_xref="MGI:MGI:88333"
                     /translation="MEQRKGLAGLFLVISLLQGTVAQTNKAKNLVQVDGSRGDGSVLL
                     TCGLTDKTIKWLKDGSIISPLNATKNTWNLGNNAKDPRGTYQCQGAKETSNPLQVYYR
                     MCENCIELNIGTISGFIFAEVISIFFLALGVYLIAGQDGVRQSRASDKQTLLQNEQLY
                     QPLKDREYDQYSHLQGNQLRKK"
     exon            167..190
                     /gene="Cd3g"
                     /gene_synonym="Ctg-3; Ctg3; T3g"
                     /inference="alignment:Splign:2.1.0"
     exon            191..418
                     /gene="Cd3g"
                     /gene_synonym="Ctg-3; Ctg3; T3g"
                     /inference="alignment:Splign:2.1.0"
     exon            419..550
                     /gene="Cd3g"
                     /gene_synonym="Ctg-3; Ctg3; T3g"
                     /inference="alignment:Splign:2.1.0"
     exon            551..594
                     /gene="Cd3g"
                     /gene_synonym="Ctg-3; Ctg3; T3g"
                     /inference="alignment:Splign:2.1.0"
     exon            595..677
                     /gene="Cd3g"
                     /gene_synonym="Ctg-3; Ctg3; T3g"
                     /inference="alignment:Splign:2.1.0"
     exon            678..1023
                     /gene="Cd3g"
                     /gene_synonym="Ctg-3; Ctg3; T3g"
                     /inference="alignment:Splign:2.1.0"
     regulatory      829..834
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Cd3g"
                     /gene_synonym="Ctg-3; Ctg3; T3g"
                     /note="hexamer: AATAAA"
     polyA_site      865
                     /gene="Cd3g"
                     /gene_synonym="Ctg-3; Ctg3; T3g"
                     /note="major polyA site"
     regulatory      1001..1006
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Cd3g"
                     /gene_synonym="Ctg-3; Ctg3; T3g"
                     /note="hexamer: ATTAAA"
     polyA_site      1023
                     /gene="Cd3g"
                     /gene_synonym="Ctg-3; Ctg3; T3g"
                     /note="major polyA site"
ORIGIN      
        1 atgcatgctg ggtggagcca ggccagctgc tgcacaggct gtctgggtgg ctgggtggct
       61 gggtggctaa gggactctca atacttctac tggagaagca aagagactga catggagcag
      121 aggaagggtc tggctggcct cttcctggtg atctctcttc ttcaaggcac tgtagcccag
      181 acaaataaag caaagaattt ggtacaagtg gatggcagcc gaggagacgg ttctgtactt
      241 ctgacttgtg gcttgactga caagactatc aagtggctta aagacgggag cataataagt
      301 cctctaaatg caactaaaaa cacatggaat ctgggcaaca atgccaaaga ccctcgaggc
      361 acgtatcagt gtcaaggagc aaaggagaca tcaaaccccc tgcaagtgta ttacagaatg
      421 tgtgaaaact gcattgagct aaacataggc accatatccg gctttatctt cgctgaggtc
      481 atcagcatct tcttccttgc tcttggtgta tatctcattg cgggacagga tggagttcgc
      541 cagtcaagag cttcagacaa gcagactctg ttgcaaaatg aacagctgta ccagcccctc
      601 aaggaccggg aatatgacca gtacagccat ctccaaggaa accaactgag gaagaagtga
      661 actcagcagg actcagggtg tccccccttc tatccagcac ccagaatcaa aacaatgcat
      721 tttggagaga gcccagtaga gagattttca accctacagg tagactgcaa gcagagagga
      781 agaactgtca aagaaatttt ggtctttttt tttttttttt caaaataaaa taaaagcttg
      841 gaggagccag tggtatgact cagaagtgga gcacttgtca accttgtttg gggttctcag
      901 caccccaccc ccagaccccc caaaaaaatt cagtgaagga aaacaagcac agtgtggtgt
      961 ttgcagagtg ccccctactg ggaaaattgt aaatgacaaa attaaaagat caagtataac
     1021 cta
//
