LOCUS       NM_001045530            2709 bp    mRNA    linear   ROD 27-FEB-2024
DEFINITION  Mus musculus cyclin J-like (Ccnjl), mRNA.
ACCESSION   NM_001045530 XM_907548 XM_976991 XM_987173
VERSION     NM_001045530.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2709)
  AUTHORS   Zhang,W., Zhang,R., Wu,L., Zhu,C., Zhang,C., Xu,C., Zhao,S.,
            Liu,X., Guo,T., Lu,Y., Gao,Z., Yu,X., Li,L., Chen,Z.J., Qin,Y. and
            Jiao,X.
  TITLE     NLRP14 deficiency causes female infertility with oocyte maturation
            defects and early embryonic arrest by impairing cytoplasmic UHRF1
            abundance
  JOURNAL   Cell Rep 42 (12), 113531 (2023)
   PUBMED   38060382
REFERENCE   2  (bases 1 to 2709)
  AUTHORS   Xu,Q., Wang,F., Xiang,Y., Zhang,X., Zhao,Z.A., Gao,Z., Liu,W.,
            Lu,X., Liu,Y., Yu,X.J., Wang,H., Huang,J., Yi,Z., Gao,S. and Li,L.
  TITLE     Maternal BCAS2 protects genomic integrity in mouse early embryonic
            development
  JOURNAL   Development 142 (22), 3943-3953 (2015)
   PUBMED   26428007
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ066789.1, AK143205.1, AL670472.7 and AV365040.1.
            
            On Feb 2, 2013 this sequence version replaced NM_001045530.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK143205.1, SRR7345562.2850620.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-35                CJ066789.1         4-38
            36-1997             AK143205.1         2-1963
            1998-2670           AL670472.7         49058-49730         c
            2671-2709           AV365040.1         204-242
FEATURES             Location/Qualifiers
     source          1..2709
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 25.78 cM"
     gene            1..2709
                     /gene="Ccnjl"
                     /gene_synonym="Gm877"
                     /note="cyclin J-like"
                     /db_xref="GeneID:380694"
                     /db_xref="MGI:MGI:2685723"
     exon            1..219
                     /gene="Ccnjl"
                     /gene_synonym="Gm877"
                     /inference="alignment:Splign:2.1.0"
     exon            220..324
                     /gene="Ccnjl"
                     /gene_synonym="Gm877"
                     /inference="alignment:Splign:2.1.0"
     CDS             262..1425
                     /gene="Ccnjl"
                     /gene_synonym="Gm877"
                     /codon_start=1
                     /product="cyclin-J-like protein"
                     /protein_id="NP_001038995.1"
                     /db_xref="CCDS:CCDS24559.1"
                     /db_xref="GeneID:380694"
                     /db_xref="MGI:MGI:2685723"
                     /translation="MDEPWWEGRVASDVHCTLREKELKLPTFRAHSPLLKSRRFFVDI
                     LTLLSRHCHLCPSARHLAIYLLDHFMDQYNITTSKQLYTVAVSCLLLASKFEDREDRV
                     PKLEQINNTRILSSQNFSLTKKELLTTELLLLEAFSWDLCLPTPAHFLDYYLLASISQ
                     KDHHCHAWPTTCLRKTKECLKEYAHYFLEVTLQDHIFYKFQPSVVAAACVGASRICLQ
                     LSPYWTRDLQRVSSYSLEHLSTCIEILLVAYDNVLKDAVAVKSQTLAMVPGSSSAPAQ
                     VLFQPPTYPTLSQPPPTTLAQFQSPAQDLCLAYRDSLQAHRSGGLLSGDTGPSLHTPY
                     PTLQPLDMCPVPVPASLSMQMAIAAEPRHCLTASYGSSYFSGSHMFPAGCFDS"
     exon            325..538
                     /gene="Ccnjl"
                     /gene_synonym="Gm877"
                     /inference="alignment:Splign:2.1.0"
     exon            539..841
                     /gene="Ccnjl"
                     /gene_synonym="Gm877"
                     /inference="alignment:Splign:2.1.0"
     exon            842..1001
                     /gene="Ccnjl"
                     /gene_synonym="Gm877"
                     /inference="alignment:Splign:2.1.0"
     exon            1002..2709
                     /gene="Ccnjl"
                     /gene_synonym="Gm877"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ttccccgagc gagggaggga ggcccccggc ggcccgaact gcgagccgcg gcgggaccga
       61 gcgcacgcag gggcgcgccg gtggccgggc gggacgggct gcagaggcag cggtcgcgag
      121 cacgcgaggc cagggaccgg gcggccatcg gagggcacta cgtacccggt gcgggaaggg
      181 acccaccacc cgcggccccc cacgccggga cagcgatgcg gtgcgccccg agatcccggt
      241 agcttcataa ctgcggcggt gatggatgag ccgtggtggg aagggcgcgt cgcctcggac
      301 gtacactgca ctctgcgcga gaaggaactg aagctgccca ccttccgtgc ccactccccg
      361 ctcctgaaga gccgtcgatt ctttgtagac attctgaccc tgctgagcag acactgccat
      421 ctctgcccct cggcccggca cctggccatc taccttctgg accacttcat ggaccagtac
      481 aacatcacca cctccaagca gctgtatact gtggctgtct cctgcctcct gctggcaagt
      541 aagtttgaag acagggaaga ccgcgtgcct aaattggagc agataaacaa tacaaggatc
      601 ctgagcagcc aaaacttctc cctcaccaag aaggagctgc tgaccacaga acttctgctc
      661 ctggaggctt tcagctggga cctttgcctg cccacgcccg cccactttct ggactactac
      721 ctcttggcct ccatcagcca gaaggaccac cactgccacg cctggcccac cacctgcctc
      781 cgaaagacca aagagtgcct caaggagtat gctcactact tcctagaagt taccctgcaa
      841 gatcatatat tttacaaatt ccagccttcc gtggttgctg cagcctgtgt tggggcctcc
      901 aggatctgcc ttcagctgtc tccctactgg accagagact tgcagagggt ctcgagctac
      961 tccctagagc atctcagcac gtgtatcgaa atcctgctgg tagcctatga caatgtcctc
     1021 aaggatgccg ttgcagtcaa gagccagacg ctggccatgg tgccgggctc atcatcagct
     1081 cccgcccaag tgctgttcca accgcccacc tacccgactc tcagccagcc accgccaaca
     1141 actctagccc agttccagag tccagcgcag gacttgtgct tggcatatcg ggactcgttg
     1201 caggcccacc gttcaggggg cctgctctca ggagacactg gtccatccct ccacacgcca
     1261 tacccaaccc tccagccctt ggatatgtgt cctgtgcccg tccctgcatc ccttagcatg
     1321 cagatggcca tagcagctga acccaggcac tgccttacgg cctcctacgg aagcagctac
     1381 ttcagcggca gccatatgtt ccctgcaggc tgtttcgaca gctaggccac acttggacca
     1441 cagggagaat cctgaaagat ccagacaaag gaagtaaata cctaagagga gagctcatcc
     1501 aggtgggaca gagaacctag tacctttaag tagagagggt ctttgctctt tttaaaaaca
     1561 aatcaacaga acaaaacatc cagggatacg cccaacagca tctctctggg aaatccttcc
     1621 gtgtatgcct ggaggacaaa gacatggctc tgtgaccttt cccctgaact gcggatccga
     1681 tggagcatat cagacttgga cagtgaggac tgcatacatc cggacttctc aaagactact
     1741 tttcatagcc ataccactga aaaagaaggg gcacctgaca cgtctgtcta tgtccctaga
     1801 agatccatcc tgagtgtctt tctctcccta gctccactcc aagggtccca tggcccgtgt
     1861 ttaggcctga gcactgagcc cataaggcac agtaagtggc tatcttgcct gccctttgtt
     1921 tttgaacccc aaatctttcc attcttctag ctatttcaca tgctgctgct tcctggaaca
     1981 gtctagcttt ctatcctgaa aaaaaaaaaa aaaatcttgt ttacataccg tgtcagggat
     2041 ttttatgata cttgaaaatt ctgtaggagc aaaaagtttg aattgccaca ctgtctgtct
     2101 gtcccacatg aggctgtatc ttttattaat ccaacttggg accaactggt ggataacaac
     2161 agcgagggat accacctctc aggctcactt tgcaagagtc cacccctggg atgcaagtgt
     2221 tcgcctattg gacttggatt actgccccct ggtgggggaa tgttgtttga aggagacaaa
     2281 ggtttgaact ggcccttact tccctccacc acttgctttt agtgctgagg ttaaactgat
     2341 cccagacttg agtttggcca atactaaagg gtagtcatac tgtggaatat tagaaaagtg
     2401 gggaggaagg gactaacgtg gtatatgaca ccagcgttga caggcaagag attgctagag
     2461 caaaagccca tgtctgggat ttgcagtgcg agggctcagg aacactgtca ccatgtgcaa
     2521 tatgttatga ctatgactca cagcctgtgc ttaagatgtt cttgtggttg ggttttttgg
     2581 tttggtttgg tttttggggt ttttttgttt gtttgttttt ttcttggtca ggggacatgc
     2641 tgttcaccca tcagaattgg aagggaggtg caaaagacca cagaaacaaa ttgtaattta
     2701 gtttttgaa
//
